RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 PSG6Q00889 435 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 DEUP1Q05D60 604 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 SRSF4Q08170 494 aaKnown RBP4.49□□□□□ -1.69
VTA1-204ENST00000491881 LMAN2Q12907 356 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 CBFBQ13951 182 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 KCNJ12Q14500 433 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 GRM4Q14833 912 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 PWP2Q15269 919 aaKnown RBP4.49□□□□□ -1.69
VTA1-204ENST00000491881 TIGD6Q17RP2 521 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 LIN54Q6MZP7 749 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 CCDC144NLQ6NUI1 221 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 TRIM72Q6ZMU5 477 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 PIK3AP1Q6ZUJ8 805 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 RFX8Q6ZV50 586 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 ZNF366Q8N895 744 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 TERB1Q8NA31 727 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 OVCA2Q8WZ82 227 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 HS6ST2Q96MM7 605 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 TIMP4Q99727 224 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 TMEM120AQ9BXJ8 343 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 BRD8Q9H0E9 1235 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 KLK15Q9H2R5 256 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 SH3BP4Q9P0V3 963 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 ASAP1Q9ULH1 1129 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 PCDHB2Q9Y5E7 798 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 WNT6Q9Y6F9 365 aa4.49□□□□□ -1.69
VTA1-204ENST00000491881 DHHO43323 396 aa4.48□□□□□ -1.69
VTA1-204ENST00000491881 JTBO76095 146 aa4.48□□□□□ -1.69
VTA1-204ENST00000491881 CER1O95813 267 aa4.48□□□□□ -1.69
VTA1-204ENST00000491881 TMIGD3P0DMS9 266 aaPredicted RBP4.48□□□□□ -1.69
VTA1-204ENST00000491881 WT1P19544 449 aaPredicted RBP4.48□□□□□ -1.69
VTA1-204ENST00000491881 AP2B1P63010 937 aa4.48□□□□□ -1.69
VTA1-204ENST00000491881 BTBD16Q32M84 506 aa4.48□□□□□ -1.69
VTA1-204ENST00000491881 RNASE12Q5GAN4 147 aaKnown RBP4.48□□□□□ -1.69
VTA1-204ENST00000491881 TMEM63BQ5T3F8 832 aa4.48□□□□□ -1.69
VTA1-204ENST00000491881 FAM90A2PQ658T7 463 aa4.48□□□□□ -1.69
VTA1-204ENST00000491881 MSANTD2Q6P1R3 559 aa4.48□□□□□ -1.69
VTA1-204ENST00000491881 SERPINA13PQ6UXR4 307 aa4.48□□□□□ -1.69
VTA1-204ENST00000491881 RAB11FIP2Q7L804 512 aa4.48□□□□□ -1.69
VTA1-204ENST00000491881 C9orf106Q8NAJ2 232 aa4.48□□□□□ -1.69
VTA1-204ENST00000491881 STT3BQ8TCJ2 826 aa4.48□□□□□ -1.69
VTA1-204ENST00000491881 RSC1A1Q92681 617 aa4.48□□□□□ -1.69
VTA1-204ENST00000491881 SARAFQ96BY9 339 aa4.48□□□□□ -1.69
VTA1-204ENST00000491881 SNX18Q96RF0 628 aa4.48□□□□□ -1.69
VTA1-204ENST00000491881 MACROD1Q9BQ69 325 aa4.48□□□□□ -1.69
VTA1-204ENST00000491881 THAP7Q9BT49 309 aaPredicted RBP4.48□□□□□ -1.69
VTA1-204ENST00000491881 UBE2J1Q9Y385 318 aaPredicted RBP4.48□□□□□ -1.69
VTA1-204ENST00000491881 TARM1B6A8C7 271 aa4.47□□□□□ -1.69
VTA1-204ENST00000491881 ZNF213O14771 459 aa4.47□□□□□ -1.69
VTA1-204ENST00000491881 IRAK2O43187 625 aa4.47□□□□□ -1.69
VTA1-204ENST00000491881 CTIFO43310 598 aaKnown RBP4.47□□□□□ -1.69
VTA1-204ENST00000491881 PPP6R2O75170 966 aa4.47□□□□□ -1.69
VTA1-204ENST00000491881 PROP1O75360 226 aa4.47□□□□□ -1.69
VTA1-204ENST00000491881 GCATO75600 419 aa4.47□□□□□ -1.69
VTA1-204ENST00000491881 RPP40O75818 363 aaKnown RBP4.47□□□□□ -1.69
VTA1-204ENST00000491881 SLC3A2P08195 630 aaKnown RBP4.47□□□□□ -1.69
VTA1-204ENST00000491881 ITPKBP27987 946 aa4.47□□□□□ -1.69
VTA1-204ENST00000491881 HOXA4Q00056 320 aaPredicted RBP4.47□□□□□ -1.69
VTA1-204ENST00000491881 MAPK7Q13164 816 aa4.47□□□□□ -1.69
VTA1-204ENST00000491881 DNASE1L3Q13609 305 aa4.47□□□□□ -1.69
VTA1-204ENST00000491881 RPS6KA2Q15349 733 aa4.47□□□□□ -1.69
VTA1-204ENST00000491881 ZNF569Q5MCW4 686 aa4.47□□□□□ -1.69
VTA1-204ENST00000491881 SUMO4Q6EEV6 95 aa4.47□□□□□ -1.69
VTA1-204ENST00000491881 TANGO2Q6ICL3 276 aa4.47□□□□□ -1.69
VTA1-204ENST00000491881 NFRKBQ6P4R8 1299 aa4.47□□□□□ -1.69
VTA1-204ENST00000491881 TMEM65Q6PI78 240 aa4.47□□□□□ -1.69
VTA1-204ENST00000491881 C1QL2Q7Z5L3 287 aa4.47□□□□□ -1.69
VTA1-204ENST00000491881 TRABD2AQ86V40 505 aa4.47□□□□□ -1.69
VTA1-204ENST00000491881 SLC44A2Q8IWA5 706 aaPredicted RBP4.47□□□□□ -1.69
VTA1-204ENST00000491881 CPXCR1Q8N123 301 aa4.47□□□□□ -1.69
VTA1-204ENST00000491881 GALNT15Q8N3T1 639 aa4.47□□□□□ -1.69
VTA1-204ENST00000491881 C12orf76Q8N812 135 aaPredicted RBP4.47□□□□□ -1.69
VTA1-204ENST00000491881 OR1N1Q8NGS0 311 aa4.47□□□□□ -1.69
VTA1-204ENST00000491881 MAFAQ8NHW3 353 aaPredicted RBP4.47□□□□□ -1.69
VTA1-204ENST00000491881 SLC22A17Q8WUG5 538 aa4.47□□□□□ -1.69
VTA1-204ENST00000491881 FAR2Q96K12 515 aa4.47□□□□□ -1.69
VTA1-204ENST00000491881 ZNF778Q96MU6 729 aa4.47□□□□□ -1.69
VTA1-204ENST00000491881 FAM167BQ9BTA0 163 aa4.47□□□□□ -1.69
VTA1-204ENST00000491881 ISCA1Q9BUE6 129 aa4.47□□□□□ -1.69
VTA1-204ENST00000491881 C1QTNF7Q9BXJ2 289 aa4.47□□□□□ -1.69
VTA1-204ENST00000491881 PABPC3Q9H361 631 aaKnown RBP4.47□□□□□ -1.69
VTA1-204ENST00000491881 CCDC134Q9H6E4 229 aa4.47□□□□□ -1.69
VTA1-204ENST00000491881 ELAC1Q9H777 363 aaKnown RBP4.47□□□□□ -1.69
VTA1-204ENST00000491881 SAP30LQ9HAJ7 183 aa4.47□□□□□ -1.69
VTA1-204ENST00000491881 SAYSD1Q9NPB0 183 aa4.47□□□□□ -1.69
VTA1-204ENST00000491881 PRDM8Q9NQV8 689 aa4.47□□□□□ -1.69
VTA1-204ENST00000491881 VPS4AQ9UN37 437 aa4.47□□□□□ -1.69
VTA1-204ENST00000491881 EFCAB8A8MWE9 144 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 KIF28PB7ZC32 967 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 SMIM22K7EJ46 135 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 IPO5O00410 1097 aaKnown RBP4.46□□□□□ -1.7
VTA1-204ENST00000491881 PRAMEF2O60811 474 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 MT-CO3P00414 261 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 DHRS4L1P0CG22 281 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 ALADP13716 330 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 VEGFAP15692 232 aaPredicted RBP4.46□□□□□ -1.7
VTA1-204ENST00000491881 MATN1P21941 496 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 GALNSP34059 522 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 THBS4P35443 961 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 IGHMBP2P38935 993 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms