RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 KRBA1A5PL33 1030 aa9.83□□□□□ -0.84
BRCA1-219ENST00000491747 HEPACAM2A8MVW5 462 aa9.83□□□□□ -0.84
BRCA1-219ENST00000491747 KCNK3O14649 394 aa9.83□□□□□ -0.84
BRCA1-219ENST00000491747 FAM200BP0CF97 657 aa9.83□□□□□ -0.84
BRCA1-219ENST00000491747 FNTAP49354 379 aa9.83□□□□□ -0.84
BRCA1-219ENST00000491747 GCNT1Q02742 428 aa9.83□□□□□ -0.84
BRCA1-219ENST00000491747 ARID5AQ03989 594 aa9.83□□□□□ -0.84
BRCA1-219ENST00000491747 TAF10Q12962 218 aa9.83□□□□□ -0.84
BRCA1-219ENST00000491747 ARHGAP15Q53QZ3 475 aa9.83□□□□□ -0.84
BRCA1-219ENST00000491747 TMEM31Q5JXX7 168 aa9.83□□□□□ -0.84
BRCA1-219ENST00000491747 ARHGAP17Q68EM7 881 aa9.83□□□□□ -0.84
BRCA1-219ENST00000491747 TMEM270Q6UE05 265 aa9.83□□□□□ -0.84
BRCA1-219ENST00000491747 MON1AQ86VX9 555 aa9.83□□□□□ -0.84
BRCA1-219ENST00000491747 KLHL7Q8IXQ5 586 aa9.83□□□□□ -0.84
BRCA1-219ENST00000491747 CMTM8Q8IZV2 173 aa9.83□□□□□ -0.84
BRCA1-219ENST00000491747 TTC39CQ8N584 583 aa9.83□□□□□ -0.84
BRCA1-219ENST00000491747 GCNAQ96QF7 691 aa9.83□□□□□ -0.84
BRCA1-219ENST00000491747 FAM124BQ9H5Z6 455 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-219ENST00000491747 TMBIM4Q9HC24 238 aa9.83□□□□□ -0.84
BRCA1-219ENST00000491747 PACSIN2Q9UNF0 486 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-219ENST00000491747 PCDHB4Q9Y5E5 795 aa9.83□□□□□ -0.84
BRCA1-219ENST00000491747 BZW2Q9Y6E2 419 aaKnown RBP9.83□□□□□ -0.84
BRCA1-219ENST00000491747 ZNF840PA6NDX5 716 aa9.83□□□□□ -0.84
BRCA1-219ENST00000491747 E7EVH7 732 aa9.83□□□□□ -0.84
BRCA1-219ENST00000491747 WEE1P30291 646 aa9.83□□□□□ -0.84
BRCA1-219ENST00000491747 RNASE9P60153 205 aaKnown RBP9.83□□□□□ -0.84
BRCA1-219ENST00000491747 ZXDBP98169 803 aa9.83□□□□□ -0.84
BRCA1-219ENST00000491747 TTC30AQ86WT1 665 aa9.83□□□□□ -0.84
BRCA1-219ENST00000491747 ARL14EPQ8N8R7 260 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-219ENST00000491747 ACTRT1Q8TDG2 376 aa9.83□□□□□ -0.84
BRCA1-219ENST00000491747 MRPS31Q92665 395 aaKnown RBP9.83□□□□□ -0.84
BRCA1-219ENST00000491747 USP13Q92995 863 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-219ENST00000491747 DUSP16Q9BY84 665 aa9.83□□□□□ -0.84
BRCA1-219ENST00000491747 RNF38Q9H0F5 515 aa9.83□□□□□ -0.84
BRCA1-219ENST00000491747 TRPC7Q9HCX4 862 aa9.83□□□□□ -0.84
BRCA1-219ENST00000491747 SLC2A4RGQ9NR83 387 aa9.83□□□□□ -0.84
BRCA1-219ENST00000491747 CHORDC1Q9UHD1 332 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-219ENST00000491747 CA14Q9ULX7 337 aa9.83□□□□□ -0.84
BRCA1-219ENST00000491747 FAM92AA1XBS5 289 aa9.82□□□□□ -0.84
BRCA1-219ENST00000491747 GTPBP10A4D1E9 387 aaKnown RBP9.82□□□□□ -0.84
BRCA1-219ENST00000491747 PRR33A8MZF0 331 aa9.82□□□□□ -0.84
BRCA1-219ENST00000491747 CCDC188H7C350 402 aa9.82□□□□□ -0.84
BRCA1-219ENST00000491747 NPR3P17342 541 aa9.82□□□□□ -0.84
BRCA1-219ENST00000491747 YWHAQP27348 245 aa9.82□□□□□ -0.84
BRCA1-219ENST00000491747 HPDP32754 393 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-219ENST00000491747 CTNNA1P35221 906 aaKnown RBP9.82□□□□□ -0.84
BRCA1-219ENST00000491747 ZNF132P52740 706 aa9.82□□□□□ -0.84
BRCA1-219ENST00000491747 YWHAEP62258 255 aaKnown RBP9.82□□□□□ -0.84
BRCA1-219ENST00000491747 EXOC3L4Q17RC7 722 aa9.82□□□□□ -0.84
BRCA1-219ENST00000491747 RNF187Q5TA31 235 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-219ENST00000491747 MFSD6LQ8IWD5 586 aa9.82□□□□□ -0.84
BRCA1-219ENST00000491747 RBBP8NLQ8NC74 664 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-219ENST00000491747 CENPHQ9H3R5 247 aa9.82□□□□□ -0.84
BRCA1-219ENST00000491747 ACP6Q9NPH0 428 aa9.82□□□□□ -0.84
BRCA1-219ENST00000491747 TSPAN16Q9UKR8 245 aa9.82□□□□□ -0.84
BRCA1-219ENST00000491747 CNTN6Q9UQ52 1028 aa9.82□□□□□ -0.84
BRCA1-219ENST00000491747 PGRMC1O00264 195 aaKnown RBP9.82□□□□□ -0.84
BRCA1-219ENST00000491747 RTN3O95197 1032 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-219ENST00000491747 VDRP11473 427 aa9.82□□□□□ -0.84
BRCA1-219ENST00000491747 CD19P15391 556 aa9.82□□□□□ -0.84
BRCA1-219ENST00000491747 PSMC3P17980 439 aa9.82□□□□□ -0.84
BRCA1-219ENST00000491747 HSD17B3P37058 310 aa9.82□□□□□ -0.84
BRCA1-219ENST00000491747 SEC24CP53992 1094 aa9.82□□□□□ -0.84
BRCA1-219ENST00000491747 GOLGA7BQ2TAP0 167 aa9.82□□□□□ -0.84
BRCA1-219ENST00000491747 SGO2Q562F6 1265 aa9.82□□□□□ -0.84
BRCA1-219ENST00000491747 BMP8AQ7Z5Y6 402 aa9.82□□□□□ -0.84
BRCA1-219ENST00000491747 SIX5Q8N196 739 aa9.82□□□□□ -0.84
BRCA1-219ENST00000491747 UBA3Q8TBC4 463 aa9.82□□□□□ -0.84
BRCA1-219ENST00000491747 FBXO32Q969P5 355 aa9.82□□□□□ -0.84
BRCA1-219ENST00000491747 PBXIP1Q96AQ6 731 aa9.82□□□□□ -0.84
BRCA1-219ENST00000491747 ZFYVE19Q96K21 471 aa9.82□□□□□ -0.84
BRCA1-219ENST00000491747 SPAG5Q96R06 1193 aa9.82□□□□□ -0.84
BRCA1-219ENST00000491747 PACSIN1Q9BY11 444 aa9.82□□□□□ -0.84
BRCA1-219ENST00000491747 TRPM5Q9NZQ8 1165 aa9.82□□□□□ -0.84
BRCA1-219ENST00000491747 GMIPQ9P107 970 aa9.82□□□□□ -0.84
BRCA1-219ENST00000491747 WNT16Q9UBV4 365 aa9.82□□□□□ -0.84
BRCA1-219ENST00000491747 APEX2Q9UBZ4 518 aa9.82□□□□□ -0.84
BRCA1-219ENST00000491747 GOLGA6L7A0A1B0GV03 622 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 GMNCA6NCL1 334 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 SHISA7A6NL88 538 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 MYO1FO00160 1098 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 ARNTLO00327 626 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 O00370 1275 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 PAEPP09466 180 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 BRD2P25440 801 aaKnown RBP9.81□□□□□ -0.84
BRCA1-219ENST00000491747 DDX6P26196 483 aaKnown RBP eCLIP9.81□□□□□ -0.84
BRCA1-219ENST00000491747 GDI1P31150 447 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 ACTN3Q08043 901 aaPredicted RBP9.81□□□□□ -0.84
BRCA1-219ENST00000491747 IFT88Q13099 833 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 TRADDQ15628 312 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 ARHGAP44Q17R89 818 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 PKDCCQ504Y2 493 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 ANKRD52Q8NB46 1076 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 TRMT61BQ9BVS5 477 aaKnown RBP9.81□□□□□ -0.84
BRCA1-219ENST00000491747 GANQ9H2C0 597 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 ACTR5Q9H9F9 607 aaPredicted RBP9.81□□□□□ -0.84
BRCA1-219ENST00000491747 PPANQ9NQ55 473 aaKnown RBP9.81□□□□□ -0.84
BRCA1-219ENST00000491747 TDP1Q9NUW8 608 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 OSER1Q9NX31 292 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 FBXL21Q9UKT6 434 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms