RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 SAAL1Q96ER3 474 aa3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 CEP95Q96GE4 821 aa3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 MS4A14Q96JA4 679 aa3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 SRPK1Q96SB4 655 aaKnown RBP3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 TMEM209Q96SK2 561 aa3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 KRT12Q99456 494 aa3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 UBAC1Q9BSL1 405 aa3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 TRIM55Q9BYV6 548 aa3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 CRNKL1Q9BZJ0 848 aaKnown RBP3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 NACAP1Q9BZK3 213 aa3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 TRIM9Q9C026 710 aa3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 MAF1Q9H063 256 aa3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 KLC2Q9H0B6 622 aa3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 MEGF9Q9H1U4 602 aa3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 NEUROG2Q9H2A3 272 aa3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 CENPHQ9H3R5 247 aa3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 POLD4Q9HCU8 107 aa3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 MYOZ2Q9NPC6 264 aa3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 PPANQ9NQ55 473 aaKnown RBP3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 IL17RBQ9NRM6 502 aa3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 FAM114A2Q9NRY5 505 aa3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 FBXO28Q9NVF7 368 aa3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 TMEM260Q9NX78 707 aa3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 AIPL1Q9NZN9 384 aa3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 ADAM22Q9P0K1 906 aa3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 CEP72Q9P209 647 aa3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 CNOT7Q9UIV1 285 aaKnown RBP3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 FBXL5Q9UKA1 691 aa3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 INTUQ9ULD6 942 aa3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 SRPK3Q9UPE1 567 aa3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 AGAP1Q9UPQ3 857 aa3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 LRRC42Q9Y546 428 aa3.67□□□□□ -1.82
CRNKL1-203ENST00000490258 THSD7BQ9C0I4 1608 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 A0A1W2PRG0 241 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 TSPY2A6NKD2 308 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 CCDC169A6NNP5 214 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 ZNF839A8K0R7 811 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 PGRMC1O00264 195 aaKnown RBP3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 DDX3XO00571 662 aaKnown RBP eCLIP3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 NOL4O94818 638 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 MPIG6BO95866 241 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 GH2P01242 217 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 MMEP08473 750 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 HSPA6P17066 643 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 PAX3P23760 479 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 KLRC1P26715 233 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 TMOD1P28289 359 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 CNGA1P29973 690 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 PRKCIP41743 596 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 MATR3P43243 847 aaKnown RBP eCLIP3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 SSR1P43307 286 aaKnown RBP3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 MTIF2P46199 727 aaKnown RBP3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 PDE6CP51160 858 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 ALDH5A1P51649 535 aaPredicted RBP3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 PTENP60484 403 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 MAGOHP61326 146 aaKnown RBP3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 KCNJ2P63252 427 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 UBXN2AP68543 259 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 NKX3-2P78367 333 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 MRPS25P82663 173 aaKnown RBP3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 MRPS35P82673 323 aaKnown RBP3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 TFAP4Q01664 338 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 GFPT1Q06210 699 aaPredicted RBP3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 KLRC3Q07444 240 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 STK4Q13043 487 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 ACVR2BQ13705 512 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 DLGAP5Q15398 846 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 RPS6KA1Q15418 735 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 PPP1R7Q15435 360 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 TRADDQ15628 312 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 CLUL1Q15846 466 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 UBE2SQ16763 222 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 PARP6Q2NL67 630 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 KRT71Q3SY84 523 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 SLC9C1Q4G0N8 1177 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 PAN2Q504Q3 1202 aaKnown RBP3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 PHF19Q5T6S3 580 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 CCSAPQ6IQ19 270 aaPredicted RBP3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 DPY19L2P1Q6NXN4 242 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 SLC30A9Q6PML9 568 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 MTHFD1LQ6UB35 978 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 ZDHHC24Q6UX98 284 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 TMC5Q6UXY8 1006 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 PIK3AP1Q6ZUJ8 805 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 C15orf52Q6ZUT6 534 aaKnown RBP3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 CATIPQ7Z7H3 387 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 SDCCAG8Q86SQ7 713 aaPredicted RBP3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 SESTD1Q86VW0 696 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 LILRB2Q8N423 598 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 SRBD1Q8N5C6 995 aaKnown RBP3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 KIAA0895Q8NCT3 520 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 OR2W6PQ8NHA6 318 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 ATL2Q8NHH9 583 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 OLIG1Q8TAK6 271 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 WDR66Q8TBY9 1149 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 NEK9Q8TD19 979 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 PARD3BQ8TEW8 1205 aa3.66□□□□□ -1.82
CRNKL1-203ENST00000490258 IFT81Q8WYA0 676 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms