RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 RTP4Q96DX8 246 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 ADARB2Q9NS39 739 aaKnown RBP13.12□□□□□ -0.31
CLIC4-202ENST00000488683 PAK5Q9P286 719 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 FCHO1O14526 889 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 ITM2AO43736 263 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 TPBGLP0DKB5 382 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 HOXA11P31270 313 aaPredicted RBP13.12□□□□□ -0.31
CLIC4-202ENST00000488683 NME3Q13232 169 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 AGR3Q8TD06 166 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 SLC2A14Q8TDB8 520 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 SLC35F5Q8WV83 523 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 TMEM40Q8WWA1 233 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 INPP5DQ92835 1189 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 RSRC1Q96IZ7 334 aaKnown RBP13.12□□□□□ -0.31
CLIC4-202ENST00000488683 RAB3IPQ96QF0 476 aaPredicted RBP13.12□□□□□ -0.31
CLIC4-202ENST00000488683 SLC4A5Q9BY07 1137 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 MTMR10Q9NXD2 777 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 RNF181Q9P0P0 153 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 AP4E1Q9UPM8 1137 aa13.12□□□□□ -0.31
CLIC4-202ENST00000488683 H3BRJ5 948 aa13.11□□□□□ -0.31
CLIC4-202ENST00000488683 DPYSL4O14531 572 aa13.11□□□□□ -0.31
CLIC4-202ENST00000488683 ATP5HO75947 161 aa13.11□□□□□ -0.31
CLIC4-202ENST00000488683 CD1EP15812 388 aa13.11□□□□□ -0.31
CLIC4-202ENST00000488683 RPL10AP62906 217 aaKnown RBP13.11□□□□□ -0.31
CLIC4-202ENST00000488683 PDK2Q15119 407 aa13.11□□□□□ -0.31
CLIC4-202ENST00000488683 GRIK4Q16099 956 aa13.11□□□□□ -0.31
CLIC4-202ENST00000488683 BOLA3Q53S33 107 aa13.11□□□□□ -0.31
CLIC4-202ENST00000488683 SLC26A11Q86WA9 606 aa13.11□□□□□ -0.31
CLIC4-202ENST00000488683 MROH8Q9H579 483 aa13.11□□□□□ -0.31
CLIC4-202ENST00000488683 PPARGC1AQ9UBK2 798 aaKnown RBP13.11□□□□□ -0.31
CLIC4-202ENST00000488683 SNX10Q9Y5X0 201 aa13.11□□□□□ -0.31
CLIC4-202ENST00000488683 MEIS3P2A8K0S8 358 aa13.11□□□□□ -0.31
CLIC4-202ENST00000488683 GOLGA8TH3BQL2 631 aa13.11□□□□□ -0.31
CLIC4-202ENST00000488683 KCNK1O00180 336 aa13.11□□□□□ -0.31
CLIC4-202ENST00000488683 TGM2P21980 687 aa13.11□□□□□ -0.31
CLIC4-202ENST00000488683 PTDSS1P48651 473 aaKnown RBP13.11□□□□□ -0.31
CLIC4-202ENST00000488683 SOX4Q06945 474 aaPredicted RBP13.11□□□□□ -0.31
CLIC4-202ENST00000488683 AP1B1Q10567 949 aa13.11□□□□□ -0.31
CLIC4-202ENST00000488683 LAMC2Q13753 1193 aa13.11□□□□□ -0.31
CLIC4-202ENST00000488683 FAM219BQ5XKK7 198 aa13.11□□□□□ -0.31
CLIC4-202ENST00000488683 TMEM110Q86TL2 294 aa13.11□□□□□ -0.31
CLIC4-202ENST00000488683 MAP7D3Q8IWC1 876 aa13.11□□□□□ -0.31
CLIC4-202ENST00000488683 POU5F2Q8N7G0 328 aa13.11□□□□□ -0.31
CLIC4-202ENST00000488683 MICAL1Q8TDZ2 1067 aa13.11□□□□□ -0.31
CLIC4-202ENST00000488683 SIGLEC10Q96LC7 697 aa13.11□□□□□ -0.31
CLIC4-202ENST00000488683 APOL2Q9BQE5 337 aa13.11□□□□□ -0.31
CLIC4-202ENST00000488683 RNPEPL1Q9HAU8 725 aa13.11□□□□□ -0.31
CLIC4-202ENST00000488683 ARHGEF4Q9NR80 690 aa13.11□□□□□ -0.31
CLIC4-202ENST00000488683 TAS2R1Q9NYW7 299 aa13.11□□□□□ -0.31
CLIC4-202ENST00000488683 HESX1Q9UBX0 185 aa13.11□□□□□ -0.31
CLIC4-202ENST00000488683 TIMM13Q9Y5L4 95 aaPredicted RBP13.11□□□□□ -0.31
CLIC4-202ENST00000488683 WASF2Q9Y6W5 498 aa13.11□□□□□ -0.31
CLIC4-202ENST00000488683 BCLAF3A2AJT9 711 aaKnown RBP13.1□□□□□ -0.31
CLIC4-202ENST00000488683 DCAF8L1A6NGE4 600 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 GYG2O15488 501 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 MAP3K13O43283 966 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 MFSD11O43934 449 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 STAU1O95793 577 aaKnown RBP13.1□□□□□ -0.31
CLIC4-202ENST00000488683 GNAZP19086 355 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 PTPN4P29074 926 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 TUBP50607 506 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 AFF1P51825 1210 aaKnown RBP13.1□□□□□ -0.31
CLIC4-202ENST00000488683 AQP5P55064 265 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 PPIL2Q13356 520 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 ACSBG2Q5FVE4 666 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 VWA5B1Q5TIE3 1220 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 TTC39BQ5VTQ0 682 aaPredicted RBP13.1□□□□□ -0.31
CLIC4-202ENST00000488683 HFE2Q6ZVN8 426 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 CATSPER4Q7RTX7 472 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 RSPH3Q86UC2 560 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 CHSY1Q86X52 802 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 ADGRF2Q8IZF7 708 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 CCNYQ8ND76 341 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 PPTC7Q8NI37 304 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 NRG4Q8WWG1 115 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 PTCD3Q96EY7 689 aaKnown RBP13.1□□□□□ -0.31
CLIC4-202ENST00000488683 OXNAD1Q96HP4 312 aaPredicted RBP13.1□□□□□ -0.31
CLIC4-202ENST00000488683 PPP1R36Q96LQ0 422 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 SLC24A3Q9HC58 644 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 PNPLA8Q9NP80 782 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 DTLQ9NZJ0 730 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 PLXNB2O15031 1838 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 ASB14A6NK59 587 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 RECQL4O94761 1208 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 APOEP02649 317 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 SMPD1P17405 629 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 MGAT1P26572 445 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 MLH1P40692 756 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 CDK16Q00536 496 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 PPP2R5DQ14738 602 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 RCN1Q15293 331 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 DCAF6Q58WW2 860 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 SMYD5Q6GMV2 418 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 RNF169Q8NCN4 708 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 TEKT4Q8WW24 435 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 SKA1Q96BD8 255 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 MIEF2Q96C03 454 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 CSPG4P5Q96PW8 444 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 OXCT2Q9BYC2 517 aaPredicted RBP13.1□□□□□ -0.31
CLIC4-202ENST00000488683 KLC2Q9H0B6 622 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms