RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 SPRY2O43597 315 aa5.04□□□□□ -1.6
ITGB1-214ENST00000488427 ERBB2P04626 1255 aa5.04□□□□□ -1.6
ITGB1-214ENST00000488427 CDK4P11802 303 aa5.04□□□□□ -1.6
ITGB1-214ENST00000488427 MST1P26927 711 aa5.04□□□□□ -1.6
ITGB1-214ENST00000488427 CFHR3Q02985 330 aa5.04□□□□□ -1.6
ITGB1-214ENST00000488427 FOXF2Q12947 444 aa5.04□□□□□ -1.6
ITGB1-214ENST00000488427 UBE4AQ14139 1066 aa5.04□□□□□ -1.6
ITGB1-214ENST00000488427 KCNB1Q14721 858 aa5.04□□□□□ -1.6
ITGB1-214ENST00000488427 STARD3Q14849 445 aa5.04□□□□□ -1.6
ITGB1-214ENST00000488427 ACOX1Q15067 660 aa5.04□□□□□ -1.6
ITGB1-214ENST00000488427 EZH2Q15910 746 aaKnown RBP5.04□□□□□ -1.6
ITGB1-214ENST00000488427 CCDC142Q17RM4 750 aa5.04□□□□□ -1.6
ITGB1-214ENST00000488427 SLC35G1Q2M3R5 365 aa5.04□□□□□ -1.6
ITGB1-214ENST00000488427 PROSER3Q2NL68 480 aa5.04□□□□□ -1.6
ITGB1-214ENST00000488427 CC2D1BQ5T0F9 858 aaKnown RBP5.04□□□□□ -1.6
ITGB1-214ENST00000488427 ABLIM2Q6H8Q1 611 aa5.04□□□□□ -1.6
ITGB1-214ENST00000488427 ANO7Q6IWH7 933 aa5.04□□□□□ -1.6
ITGB1-214ENST00000488427 DCDC5Q6ZRR9 648 aa5.04□□□□□ -1.6
ITGB1-214ENST00000488427 RINLQ6ZS11 566 aa5.04□□□□□ -1.6
ITGB1-214ENST00000488427 BCDIN3DQ7Z5W3 292 aaKnown RBP5.04□□□□□ -1.6
ITGB1-214ENST00000488427 RASGRP3Q8IV61 690 aa5.04□□□□□ -1.6
ITGB1-214ENST00000488427 SAMD3Q8N6K7 520 aa5.04□□□□□ -1.6
ITGB1-214ENST00000488427 SUN3Q8TAQ9 357 aa5.04□□□□□ -1.6
ITGB1-214ENST00000488427 VOPP1Q96AW1 172 aa5.04□□□□□ -1.6
ITGB1-214ENST00000488427 REPS1Q96D71 796 aa5.04□□□□□ -1.6
ITGB1-214ENST00000488427 SGCZQ96LD1 299 aa5.04□□□□□ -1.6
ITGB1-214ENST00000488427 RXFP3Q9NSD7 469 aa5.04□□□□□ -1.6
ITGB1-214ENST00000488427 SERGEFQ9UGK8 458 aa5.04□□□□□ -1.6
ITGB1-214ENST00000488427 ZMYND8Q9ULU4 1186 aaPredicted RBP5.04□□□□□ -1.6
ITGB1-214ENST00000488427 MAGED2Q9UNF1 606 aaPredicted RBP5.04□□□□□ -1.6
ITGB1-214ENST00000488427 FAM135BQ49AJ0 1406 aa5.04□□□□□ -1.6
ITGB1-214ENST00000488427 LRP6O75581 1613 aa5.04□□□□□ -1.6
ITGB1-214ENST00000488427 JCADQ9P266 1359 aa5.04□□□□□ -1.6
ITGB1-214ENST00000488427 AOX1Q06278 1338 aa5.03□□□□□ -1.6
ITGB1-214ENST00000488427 PRRT4C9JH25 899 aa5.03□□□□□ -1.6
ITGB1-214ENST00000488427 ADAMTS3O15072 1205 aa5.03□□□□□ -1.6
ITGB1-214ENST00000488427 PDE8BO95263 885 aa5.03□□□□□ -1.6
ITGB1-214ENST00000488427 TUBB4AP04350 444 aa5.03□□□□□ -1.6
ITGB1-214ENST00000488427 SRGAP2BP0DMP2 458 aa5.03□□□□□ -1.6
ITGB1-214ENST00000488427 FPR3P25089 353 aa5.03□□□□□ -1.6
ITGB1-214ENST00000488427 LMO1P25800 156 aa5.03□□□□□ -1.6
ITGB1-214ENST00000488427 GABRB3P28472 473 aa5.03□□□□□ -1.6
ITGB1-214ENST00000488427 NTSR1P30989 418 aa5.03□□□□□ -1.6
ITGB1-214ENST00000488427 HSPA7P48741 367 aa5.03□□□□□ -1.6
ITGB1-214ENST00000488427 CSHL1Q14406 222 aa5.03□□□□□ -1.6
ITGB1-214ENST00000488427 LARS2Q15031 903 aaKnown RBP5.03□□□□□ -1.6
ITGB1-214ENST00000488427 TMEM119Q4V9L6 283 aa5.03□□□□□ -1.6
ITGB1-214ENST00000488427 GLE1Q53GS7 698 aaKnown RBP5.03□□□□□ -1.6
ITGB1-214ENST00000488427 RNASE12Q5GAN4 147 aaKnown RBP5.03□□□□□ -1.6
ITGB1-214ENST00000488427 PGBD2Q6P3X8 592 aa5.03□□□□□ -1.6
ITGB1-214ENST00000488427 GATAD2AQ86YP4 633 aa5.03□□□□□ -1.6
ITGB1-214ENST00000488427 WDR60Q8WVS4 1066 aa5.03□□□□□ -1.6
ITGB1-214ENST00000488427 CTHRC1Q96CG8 243 aa5.03□□□□□ -1.6
ITGB1-214ENST00000488427 WDYHV1Q96HA8 205 aa5.03□□□□□ -1.6
ITGB1-214ENST00000488427 TMEM41AQ96HV5 264 aa5.03□□□□□ -1.6
ITGB1-214ENST00000488427 FAM118BQ9BPY3 351 aa5.03□□□□□ -1.6
ITGB1-214ENST00000488427 ADGRE3Q9BY15 652 aa5.03□□□□□ -1.6
ITGB1-214ENST00000488427 STK33Q9BYT3 514 aa5.03□□□□□ -1.6
ITGB1-214ENST00000488427 USP29Q9HBJ7 922 aa5.03□□□□□ -1.6
ITGB1-214ENST00000488427 PI4KBQ9UBF8 816 aa5.03□□□□□ -1.6
ITGB1-214ENST00000488427 CNTLNQ9NXG0 1405 aa5.03□□□□□ -1.6
ITGB1-214ENST00000488427 AGLP35573 1532 aa5.02□□□□□ -1.61
ITGB1-214ENST00000488427 IQGAP1P46940 1657 aa5.02□□□□□ -1.61
ITGB1-214ENST00000488427 SHPRHQ149N8 1683 aa5.02□□□□□ -1.61
ITGB1-214ENST00000488427 SPATA31A1Q5TZJ5 1347 aa5.02□□□□□ -1.61
ITGB1-214ENST00000488427 DNMT1P26358 1616 aaKnown RBP5.02□□□□□ -1.61
ITGB1-214ENST00000488427 OR2W5A6NFC9 320 aa5.02□□□□□ -1.61
ITGB1-214ENST00000488427 H3BNC9 293 aa5.02□□□□□ -1.61
ITGB1-214ENST00000488427 NCK2O43639 380 aa5.02□□□□□ -1.61
ITGB1-214ENST00000488427 RBMXL2O75526 392 aaKnown RBP5.02□□□□□ -1.61
ITGB1-214ENST00000488427 SETSIPP0DME0 302 aa5.02□□□□□ -1.61
ITGB1-214ENST00000488427 TMIGD3P0DMS9 266 aaPredicted RBP5.02□□□□□ -1.61
ITGB1-214ENST00000488427 HTR3AP46098 478 aa5.02□□□□□ -1.61
ITGB1-214ENST00000488427 POLE2P56282 527 aa5.02□□□□□ -1.61
ITGB1-214ENST00000488427 PSG6Q00889 435 aa5.02□□□□□ -1.61
ITGB1-214ENST00000488427 SRSF4Q08170 494 aaKnown RBP5.02□□□□□ -1.61
ITGB1-214ENST00000488427 SRSF7Q16629 238 aaKnown RBP eCLIP5.02□□□□□ -1.61
ITGB1-214ENST00000488427 PFKFB3Q16875 520 aaPredicted RBP5.02□□□□□ -1.61
ITGB1-214ENST00000488427 P3H1Q32P28 736 aa5.02□□□□□ -1.61
ITGB1-214ENST00000488427 KIAA0408Q6ZU52 694 aa5.02□□□□□ -1.61
ITGB1-214ENST00000488427 MYLK4Q86YV6 388 aaPredicted RBP5.02□□□□□ -1.61
ITGB1-214ENST00000488427 METTL25Q8N6Q8 603 aa5.02□□□□□ -1.61
ITGB1-214ENST00000488427 LINC01465Q8N7H1 131 aa5.02□□□□□ -1.61
ITGB1-214ENST00000488427 MAFAQ8NHW3 353 aaPredicted RBP5.02□□□□□ -1.61
ITGB1-214ENST00000488427 MUL1Q969V5 352 aa5.02□□□□□ -1.61
ITGB1-214ENST00000488427 LTV1Q96GA3 475 aaPredicted RBP5.02□□□□□ -1.61
ITGB1-214ENST00000488427 WDR24Q96S15 920 aa5.02□□□□□ -1.61
ITGB1-214ENST00000488427 SLC39A10Q9ULF5 831 aa5.02□□□□□ -1.61
ITGB1-214ENST00000488427 ARHGEF17Q96PE2 2063 aaPredicted RBP5.01□□□□□ -1.61
ITGB1-214ENST00000488427 NWD1Q149M9 1564 aa5.01□□□□□ -1.61
ITGB1-214ENST00000488427 FAM234BA2RU67 622 aa5.01□□□□□ -1.61
ITGB1-214ENST00000488427 AGPSO00116 658 aa5.01□□□□□ -1.61
ITGB1-214ENST00000488427 DSCR3O14972 297 aa5.01□□□□□ -1.61
ITGB1-214ENST00000488427 PLA2G6O60733 806 aa5.01□□□□□ -1.61
ITGB1-214ENST00000488427 NDST3O95803 873 aa5.01□□□□□ -1.61
ITGB1-214ENST00000488427 DRD1P21728 446 aa5.01□□□□□ -1.61
ITGB1-214ENST00000488427 JAK3P52333 1124 aa5.01□□□□□ -1.61
ITGB1-214ENST00000488427 ALDH18A1P54886 795 aaKnown RBP5.01□□□□□ -1.61
ITGB1-214ENST00000488427 PROK1P58294 105 aa5.01□□□□□ -1.61
ITGB1-214ENST00000488427 HNRNPA0Q13151 305 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms