RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 EHBP1Q8NDI1 1231 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 IPO4Q8TEX9 1081 aaKnown RBP20.21■□□□□ 0.83
CD55-209ENST00000488171 EDEM1Q92611 657 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 ERLEC1Q96DZ1 483 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 EDEM2Q9BV94 578 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 CNGB3Q9NQW8 809 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 CACNA2D2Q9NY47 1150 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 SFMBT1Q9UHJ3 866 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 NCOR2Q9Y618 2525 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 LNP1A1A4G5 178 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 PATE3B3GLJ2 98 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 MAP3K13O43283 966 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 GNA14O95837 355 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 ADRB1P08588 477 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 LCP1P13796 627 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 NDUFV2P19404 249 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 PTGER3P43115 390 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 RGS7P49802 495 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 GCNT1Q02742 428 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 BYSLQ13895 437 aaKnown RBP20.21■□□□□ 0.83
CD55-209ENST00000488171 GEN1Q17RS7 908 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 RNF43Q68DV7 783 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 SDE2Q6IQ49 451 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 RBBP8NLQ8NC74 664 aaPredicted RBP20.21■□□□□ 0.83
CD55-209ENST00000488171 DDX1Q92499 740 aaKnown RBP20.21■□□□□ 0.83
CD55-209ENST00000488171 KREMEN1Q96MU8 473 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 SRRTQ9BXP5 876 aaKnown RBP20.21■□□□□ 0.83
CD55-209ENST00000488171 ABCC13Q9NSE7 274 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 CLEC4EQ9ULY5 219 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 HBS1LQ9Y450 684 aaKnown RBP20.21■□□□□ 0.83
CD55-209ENST00000488171 RAD54BQ9Y620 910 aa20.21■□□□□ 0.83
CD55-209ENST00000488171 WASH3PC4AMC7 463 aa20.2■□□□□ 0.82
CD55-209ENST00000488171 M0QYV0 167 aa20.2■□□□□ 0.82
CD55-209ENST00000488171 GFRA2O00451 464 aa20.2■□□□□ 0.82
CD55-209ENST00000488171 PIK3R2O00459 728 aa20.2■□□□□ 0.82
CD55-209ENST00000488171 ARMCX6Q7L4S7 300 aa20.2■□□□□ 0.82
CD55-209ENST00000488171 RNF139Q8WU17 664 aa20.2■□□□□ 0.82
CD55-209ENST00000488171 PIGKQ92643 395 aa20.2■□□□□ 0.82
CD55-209ENST00000488171 PIWIL1Q96J94 861 aaKnown RBP20.2■□□□□ 0.82
CD55-209ENST00000488171 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.2■□□□□ 0.82
CD55-209ENST00000488171 KHNYNO15037 678 aaKnown RBP20.19■□□□□ 0.82
CD55-209ENST00000488171 AFPP02771 609 aaKnown RBP20.19■□□□□ 0.82
CD55-209ENST00000488171 CYBBP04839 570 aa20.19■□□□□ 0.82
CD55-209ENST00000488171 STILQ15468 1287 aa20.19■□□□□ 0.82
CD55-209ENST00000488171 SPDYCQ5MJ68 293 aa20.19■□□□□ 0.82
CD55-209ENST00000488171 TRIML1Q8N9V2 468 aa20.19■□□□□ 0.82
CD55-209ENST00000488171 LSM14BQ9BX40 385 aaKnown RBP20.19■□□□□ 0.82
CD55-209ENST00000488171 INTS2Q9H0H0 1204 aaKnown RBP20.19■□□□□ 0.82
CD55-209ENST00000488171 SLC6A17Q9H1V8 727 aa20.19■□□□□ 0.82
CD55-209ENST00000488171 TMEM74BQ9NUR3 256 aa20.19■□□□□ 0.82
CD55-209ENST00000488171 CNTN6Q9UQ52 1028 aa20.19■□□□□ 0.82
CD55-209ENST00000488171 STON1Q9Y6Q2 735 aa20.19■□□□□ 0.82
CD55-209ENST00000488171 MSI1O43347 362 aaKnown RBP20.18■□□□□ 0.82
CD55-209ENST00000488171 HARS2P49590 506 aaKnown RBP20.18■□□□□ 0.82
CD55-209ENST00000488171 IRX4P78413 519 aa20.18■□□□□ 0.82
CD55-209ENST00000488171 ENPP2Q13822 863 aa20.18■□□□□ 0.82
CD55-209ENST00000488171 MSANTD2Q6P1R3 559 aa20.18■□□□□ 0.82
CD55-209ENST00000488171 CLEC4CQ8WTT0 213 aa20.18■□□□□ 0.82
CD55-209ENST00000488171 DDI1Q8WTU0 396 aa20.18■□□□□ 0.82
CD55-209ENST00000488171 IRGQQ8WZA9 623 aa20.18■□□□□ 0.82
CD55-209ENST00000488171 KIAA1468Q9P260 1216 aa20.18■□□□□ 0.82
CD55-209ENST00000488171 THAP10Q9P2Z0 257 aaPredicted RBP20.18■□□□□ 0.82
CD55-209ENST00000488171 STOML2Q9UJZ1 356 aa20.18■□□□□ 0.82
CD55-209ENST00000488171 IGHV1OR15-9A0A0B4J2B8 117 aa20.17■□□□□ 0.82
CD55-209ENST00000488171 C4orf47A7E2U8 309 aa20.17■□□□□ 0.82
CD55-209ENST00000488171 HOXD9P28356 352 aaPredicted RBP20.17■□□□□ 0.82
CD55-209ENST00000488171 IL12RB1P42701 662 aa20.17■□□□□ 0.82
CD55-209ENST00000488171 UBE2HP62256 183 aa20.17■□□□□ 0.82
CD55-209ENST00000488171 CAMK4Q16566 473 aa20.17■□□□□ 0.82
CD55-209ENST00000488171 LYSMD4Q5XG99 296 aa20.17■□□□□ 0.82
CD55-209ENST00000488171 ANKS1BQ7Z6G8 1248 aa20.17■□□□□ 0.82
CD55-209ENST00000488171 SYT12Q8IV01 421 aa20.17■□□□□ 0.82
CD55-209ENST00000488171 MRGPRX1Q96LB2 322 aa20.17■□□□□ 0.82
CD55-209ENST00000488171 HSFY1Q96LI6 401 aa20.17■□□□□ 0.82
CD55-209ENST00000488171 MED15Q96RN5 788 aa20.17■□□□□ 0.82
CD55-209ENST00000488171 SLC2A11Q9BYW1 496 aa20.17■□□□□ 0.82
CD55-209ENST00000488171 CD93Q9NPY3 652 aa20.17■□□□□ 0.82
CD55-209ENST00000488171 EVLQ9UI08 416 aaPredicted RBP20.17■□□□□ 0.82
CD55-209ENST00000488171 CEP192Q8TEP8 1941 aa20.16■□□□□ 0.82
CD55-209ENST00000488171 CDX4O14627 284 aaPredicted RBP20.16■□□□□ 0.82
CD55-209ENST00000488171 ZBTB24O43167 697 aaPredicted RBP20.16■□□□□ 0.82
CD55-209ENST00000488171 AP5Z1O43299 807 aa20.16■□□□□ 0.82
CD55-209ENST00000488171 TSPAN3O60637 253 aa20.16■□□□□ 0.82
CD55-209ENST00000488171 ZNF217O75362 1048 aa20.16■□□□□ 0.82
CD55-209ENST00000488171 LATS1O95835 1130 aa20.16■□□□□ 0.82
CD55-209ENST00000488171 IGLV3-27P01718 113 aa20.16■□□□□ 0.82
CD55-209ENST00000488171 ITPKAP23677 461 aa20.16■□□□□ 0.82
CD55-209ENST00000488171 RPL6Q02878 288 aaKnown RBP20.16■□□□□ 0.82
CD55-209ENST00000488171 MPPE1Q53F39 396 aa20.16■□□□□ 0.82
CD55-209ENST00000488171 PEAR1Q5VY43 1037 aaPredicted RBP20.16■□□□□ 0.82
CD55-209ENST00000488171 TMEM215Q68D42 235 aa20.16■□□□□ 0.82
CD55-209ENST00000488171 SLC36A4Q6YBV0 504 aa20.16■□□□□ 0.82
CD55-209ENST00000488171 DEFB119Q8N690 84 aa20.16■□□□□ 0.82
CD55-209ENST00000488171 ELOVL2Q9NXB9 296 aa20.16■□□□□ 0.82
CD55-209ENST00000488171 RWDD2AQ9UIY3 292 aa20.16■□□□□ 0.82
CD55-209ENST00000488171 PILRBQ9UKJ0 227 aa20.16■□□□□ 0.82
CD55-209ENST00000488171 ATXN2Q99700 1313 aaKnown RBP20.16■□□□□ 0.82
CD55-209ENST00000488171 SPTBN2O15020 2390 aa20.16■□□□□ 0.82
CD55-209ENST00000488171 NPC1O15118 1278 aa20.15■□□□□ 0.82
CD55-209ENST00000488171 FGFR1OPO95684 399 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms