RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 IFT80Q9P2H3 777 aaPredicted RBP5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 AMFRQ9UKV5 643 aa5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 PCDHB2Q9Y5E7 798 aa5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 C1QTNF3-AMACRE9PGA6 284 aa5.62□□□□□ -1.51
PRPF38A-203ENST00000487160 URI1O94763 535 aaPredicted RBP5.62□□□□□ -1.51
PRPF38A-203ENST00000487160 PEPDP12955 493 aa5.62□□□□□ -1.51
PRPF38A-203ENST00000487160 ITPKBP27987 946 aa5.62□□□□□ -1.51
PRPF38A-203ENST00000487160 THBS4P35443 961 aa5.62□□□□□ -1.51
PRPF38A-203ENST00000487160 MPLP40238 635 aa5.62□□□□□ -1.51
PRPF38A-203ENST00000487160 CDK7P50613 346 aa5.62□□□□□ -1.51
PRPF38A-203ENST00000487160 RBM5P52756 815 aaKnown RBP eCLIP5.62□□□□□ -1.51
PRPF38A-203ENST00000487160 PSG6Q00889 435 aa5.62□□□□□ -1.51
PRPF38A-203ENST00000487160 DNASE1L3Q13609 305 aa5.62□□□□□ -1.51
PRPF38A-203ENST00000487160 SLC12A1Q13621 1099 aa5.62□□□□□ -1.51
PRPF38A-203ENST00000487160 AAK1Q2M2I8 961 aa5.62□□□□□ -1.51
PRPF38A-203ENST00000487160 L1TD1Q5T7N2 865 aaKnown RBP5.62□□□□□ -1.51
PRPF38A-203ENST00000487160 ANKS1BQ7Z6G8 1248 aa5.62□□□□□ -1.51
PRPF38A-203ENST00000487160 PRRT2Q7Z6L0 340 aaPredicted RBP5.62□□□□□ -1.51
PRPF38A-203ENST00000487160 TMTC1Q8IUR5 882 aa5.62□□□□□ -1.51
PRPF38A-203ENST00000487160 VRK3Q8IV63 474 aa5.62□□□□□ -1.51
PRPF38A-203ENST00000487160 TMEM57Q8N5G2 664 aa5.62□□□□□ -1.51
PRPF38A-203ENST00000487160 NGDNQ8NEJ9 315 aaKnown RBP5.62□□□□□ -1.51
PRPF38A-203ENST00000487160 CEP70Q8NHQ1 597 aa5.62□□□□□ -1.51
PRPF38A-203ENST00000487160 LINC00476Q8WZB0 136 aa5.62□□□□□ -1.51
PRPF38A-203ENST00000487160 ZNF341Q9BYN7 854 aa5.62□□□□□ -1.51
PRPF38A-203ENST00000487160 ABHD16BQ9H3Z7 469 aa5.62□□□□□ -1.51
PRPF38A-203ENST00000487160 CYP4F11Q9HBI6 524 aa5.62□□□□□ -1.51
PRPF38A-203ENST00000487160 DUSP22Q9NRW4 184 aa5.62□□□□□ -1.51
PRPF38A-203ENST00000487160 SERTAD4Q9NUC0 356 aa5.62□□□□□ -1.51
PRPF38A-203ENST00000487160 RAB21Q9UL25 225 aa5.62□□□□□ -1.51
PRPF38A-203ENST00000487160 SALL3Q9BXA9 1300 aa5.62□□□□□ -1.51
PRPF38A-203ENST00000487160 GRIN2AQ12879 1464 aa5.62□□□□□ -1.51
PRPF38A-203ENST00000487160 COL4A3Q01955 1670 aa5.62□□□□□ -1.51
PRPF38A-203ENST00000487160 CCDC187A0A096LP49 1063 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 FAM90A20PA6NIJ5 464 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 SLC38A8A6NNN8 435 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 LINC00473A8K010 186 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 TMPRSS11DO60235 418 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 TJP3O95049 919 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 TTLL1O95922 423 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 ELFN1P0C7U0 828 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 EBLN1P0CF75 366 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 ZNF37AP17032 561 aaPredicted RBP5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 NDUFB7P17568 137 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 MMP8P22894 467 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 ADRA1BP35368 520 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 DIO1P49895 249 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 FAM3BP58499 235 aaPredicted RBP5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 MRPS35P82673 323 aaKnown RBP5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 RNASELQ05823 741 aaKnown RBP5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 FOXI1Q12951 378 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 TBX2Q13207 712 aaPredicted RBP5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 MPP3Q13368 585 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 PDCLQ13371 301 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 TBC1D25Q3MII6 688 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 INTS11Q5TA45 600 aaKnown RBP5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 IGFL4Q6B9Z1 124 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 ACSM6Q6P461 480 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 C16orf89Q6UX73 402 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 Q6YL49 198 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 WDR53Q7Z5U6 358 aaPredicted RBP5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 NAXEQ8NCW5 288 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 ABHD11Q8NFV4 315 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 NPIPB3Q92617 1050 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 CAVIN3Q969G5 261 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 MPP4Q96JB8 637 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 COQ10AQ96MF6 247 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 USP29Q9HBJ7 922 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 KCNK9Q9NPC2 374 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 HECW2Q9P2P5 1572 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 LRIT1Q9P2V4 623 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 TRPC5Q9UL62 973 aaPredicted RBP5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 VPS4AQ9UN37 437 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 ST3GAL5Q9UNP4 418 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 DERAQ9Y315 318 aa5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 UBE2J1Q9Y385 318 aaPredicted RBP5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 EPN1Q9Y6I3 576 aaPredicted RBP5.61□□□□□ -1.51
PRPF38A-203ENST00000487160 MAPKBP1O60336 1514 aa5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 ABCC10Q5T3U5 1492 aa5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 PRRT4C9JH25 899 aa5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 H0YIZ8 118 aa5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 NKX2-8O15522 239 aa5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 SUV39H1O43463 412 aa5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 NARSO43776 548 aaKnown RBP5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 PDE8BO95263 885 aa5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 ESRRBO95718 433 aa5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 TFRCP02786 760 aaKnown RBP5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 FAM163BP0C2L3 166 aa5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 TMIGD3P0DMS9 266 aaPredicted RBP5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 MAKP20794 623 aa5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 TGM1P22735 817 aa5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 FPR3P25089 353 aa5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 IGHMBP2P38935 993 aaKnown RBP5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 GRIA3P42263 894 aa5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 AVPR1BP47901 424 aa5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 TXNL4AP83876 142 aaKnown RBP5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 UBE3AQ05086 875 aa5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 G3BP1Q13283 466 aaKnown RBP eCLIP5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 DLGAP5Q15398 846 aa5.6□□□□□ -1.51
PRPF38A-203ENST00000487160 FAM187BQ17R55 369 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms