RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 ADM5C9JUS6 153 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 E7EVH7 732 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 CCER2I3L3R5 266 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 TRIAP1O43715 76 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 TK1P04183 234 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 ELANEP08246 267 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 IFIT1P09914 478 aaKnown RBP4.54□□□□□ -1.68
PTCD3-216ENST00000487043 MAN2A2P49641 1150 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 PDE6CP51160 858 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 SCNN1GP51170 649 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 RPS7P62081 194 aaKnown RBP4.54□□□□□ -1.68
PTCD3-216ENST00000487043 TLE2Q04725 743 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 UBE3AQ05086 875 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 MAPK7Q13164 816 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 TUBB3Q13509 450 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 ICE2Q659A1 982 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 NAIF1Q69YI7 327 aaPredicted RBP4.54□□□□□ -1.68
PTCD3-216ENST00000487043 SYT13Q7L8C5 426 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 GDF7Q7Z4P5 450 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 ZNF808Q8N4W9 903 aaPredicted RBP4.54□□□□□ -1.68
PTCD3-216ENST00000487043 TMEM57Q8N5G2 664 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 MBD3L2Q8NHZ7 208 aaPredicted RBP4.54□□□□□ -1.68
PTCD3-216ENST00000487043 HTRA1Q92743 480 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 SDCCAG3Q96C92 435 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 HVCN1Q96D96 273 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 RNF31Q96EP0 1072 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 ZDHHC12Q96GR4 267 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 MRIQ9BWK5 157 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 ZCWPW1Q9H0M4 648 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 C19orf53Q9UNZ5 99 aaPredicted RBP4.54□□□□□ -1.68
PTCD3-216ENST00000487043 SORCS3Q9UPU3 1222 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 SSX2IPQ9Y2D8 614 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 MAP3K2Q9Y2U5 619 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 TMEM98Q9Y2Y6 226 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 KNSTRNQ9Y448 316 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 SNX14Q9Y5W7 946 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 TULP4Q9NRJ4 1543 aa4.54□□□□□ -1.68
PTCD3-216ENST00000487043 XRN1Q8IZH2 1706 aaKnown RBP4.54□□□□□ -1.68
PTCD3-216ENST00000487043 KTN1Q86UP2 1357 aaKnown RBP4.53□□□□□ -1.68
PTCD3-216ENST00000487043 XDHP47989 1333 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-216ENST00000487043 A0A1W2PS29 197 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 DYTNA2CJ06 578 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 FAM90A18PA6NE21 464 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 FAM90A16PA6NEW6 464 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 FAM90A9PA6NNJ1 464 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 PRSS47A8MTI9 375 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 EFCAB8A8MWE9 144 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 FAM90A5PA8MXJ8 464 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 KIF28PB7ZC32 967 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 OVOL3O00110 214 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 RPP40O75818 363 aaKnown RBP4.53□□□□□ -1.68
PTCD3-216ENST00000487043 SCAF4O95104 1147 aaKnown RBP4.53□□□□□ -1.68
PTCD3-216ENST00000487043 CER1O95813 267 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 FAM90A15PP0C7V4 464 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 FAM90A14PP0C7W9 464 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 RBL1P28749 1068 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 EPHA3P29320 983 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 HIBADHP31937 336 aaKnown RBP4.53□□□□□ -1.68
PTCD3-216ENST00000487043 MTHFSP49914 203 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 CCR5P51681 352 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 CXADRP78310 365 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 SP2Q02086 613 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 CRHR2Q13324 411 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 CSHL1Q14406 222 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 HLXQ14774 488 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-216ENST00000487043 GEN1Q17RS7 908 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 LY6KQ17RY6 165 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 TTC22Q5TAA0 569 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 B3GNTL1Q67FW5 361 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-216ENST00000487043 LRRC55Q6ZSA7 311 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 MICALCLQ6ZW33 695 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 USP51Q70EK9 711 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 HTR3DQ70Z44 454 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 TBC1D1Q86TI0 1168 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-216ENST00000487043 CIR1Q86X95 450 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-216ENST00000487043 ABRAQ8N0Z2 381 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 TMEM132CQ8N3T6 1108 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 PCYOX1LQ8NBM8 494 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 OSCP1Q8WVF1 389 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 HMGB4Q8WW32 186 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 CPT1BQ92523 772 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 HDAC2Q92769 488 aaKnown RBP4.53□□□□□ -1.68
PTCD3-216ENST00000487043 FAM136AQ96C01 138 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 RRP36Q96EU6 259 aaKnown RBP4.53□□□□□ -1.68
PTCD3-216ENST00000487043 C17orf80Q9BSJ5 609 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 SSBP3Q9BWW4 388 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-216ENST00000487043 KRTAP9-8Q9BYQ0 159 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 TPSD1Q9BZJ3 242 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 TWSG1Q9GZX9 223 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 UNKLQ9H9P5 680 aaKnown RBP4.53□□□□□ -1.68
PTCD3-216ENST00000487043 IRAK4Q9NWZ3 460 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 KCNE5Q9UJ90 142 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 KCND3Q9UK17 655 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 FBXO2Q9UK22 296 aaPredicted RBP4.53□□□□□ -1.68
PTCD3-216ENST00000487043 CNTN6Q9UQ52 1028 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 SLC27A6Q9Y2P4 619 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 RRP7AQ9Y3A4 280 aaKnown RBP4.53□□□□□ -1.68
PTCD3-216ENST00000487043 CHST2Q9Y4C5 530 aa4.53□□□□□ -1.68
PTCD3-216ENST00000487043 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms