RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 MYO1HQ8N1T3 1032 aa16.87■□□□□ 0.29
COL7A1-210ENST00000487017 CTNNAL1Q9UBT7 734 aa16.87■□□□□ 0.29
COL7A1-210ENST00000487017 ARHGEF28Q8N1W1 1705 aaKnown RBP16.87■□□□□ 0.29
COL7A1-210ENST00000487017 RNF103O00237 685 aa16.87■□□□□ 0.29
COL7A1-210ENST00000487017 CRTAMO95727 393 aa16.87■□□□□ 0.29
COL7A1-210ENST00000487017 TBCELQ5QJ74 424 aa16.87■□□□□ 0.29
COL7A1-210ENST00000487017 LRRC55Q6ZSA7 311 aa16.87■□□□□ 0.29
COL7A1-210ENST00000487017 KAT2BQ92831 832 aa16.87■□□□□ 0.29
COL7A1-210ENST00000487017 GANQ9H2C0 597 aa16.87■□□□□ 0.29
COL7A1-210ENST00000487017 CAPN10Q9HC96 672 aa16.87■□□□□ 0.29
COL7A1-210ENST00000487017 UBP1Q9NZI7 540 aa16.87■□□□□ 0.29
COL7A1-210ENST00000487017 CYP3A4P08684 503 aa16.87■□□□□ 0.29
COL7A1-210ENST00000487017 ATP6V1B2P21281 511 aa16.87■□□□□ 0.29
COL7A1-210ENST00000487017 MGAT1P26572 445 aa16.87■□□□□ 0.29
COL7A1-210ENST00000487017 KCTD14Q9BQ13 255 aaPredicted RBP16.87■□□□□ 0.29
COL7A1-210ENST00000487017 BBS2Q9BXC9 721 aa16.87■□□□□ 0.29
COL7A1-210ENST00000487017 SCUBE2Q9NQ36 999 aa16.87■□□□□ 0.29
COL7A1-210ENST00000487017 PAEPP09466 180 aa16.87■□□□□ 0.29
COL7A1-210ENST00000487017 FBXO47Q5MNV8 452 aa16.87■□□□□ 0.29
COL7A1-210ENST00000487017 AADACL2Q6P093 401 aa16.87■□□□□ 0.29
COL7A1-210ENST00000487017 KCNMB4Q86W47 210 aa16.87■□□□□ 0.29
COL7A1-210ENST00000487017 VGLL2Q8N8G2 317 aa16.87■□□□□ 0.29
COL7A1-210ENST00000487017 USE1Q9NZ43 259 aa16.87■□□□□ 0.29
COL7A1-210ENST00000487017 PCYOX1Q9UHG3 505 aa16.87■□□□□ 0.29
COL7A1-210ENST00000487017 STARD13Q9Y3M8 1113 aa16.87■□□□□ 0.29
COL7A1-210ENST00000487017 APOC4-APOC2K7ER74 178 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 TRDMT1O14717 391 aaKnown RBP16.86■□□□□ 0.29
COL7A1-210ENST00000487017 GPR182O15218 404 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 KRT75O95678 551 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 APOC2P02655 101 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 SHBGP04278 402 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 CD151P48509 253 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 PSMD7P51665 324 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 ANGPT1Q15389 498 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 CNGA2Q16280 664 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 MIB1Q86YT6 1006 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 ARMCX1Q9P291 453 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 DOLKQ9UPQ8 538 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 CAB39Q9Y376 341 aaPredicted RBP16.86■□□□□ 0.29
COL7A1-210ENST00000487017 NCANO14594 1321 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 RAG1P15918 1043 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 EIF4BP23588 611 aaKnown RBP16.86■□□□□ 0.29
COL7A1-210ENST00000487017 ACAP1Q15027 740 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 EPS8L1Q8TE68 723 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 GLMNQ92990 594 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 RCCD1A6NED2 376 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 EPB42P16452 691 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 RPA3P35244 121 aaPredicted RBP16.86■□□□□ 0.29
COL7A1-210ENST00000487017 OXCT1P55809 520 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 NAB1Q13506 487 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 FAM180AQ6UWF9 173 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 BRSK2Q8IWQ3 736 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 FBXO32Q969P5 355 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 ZFP42Q96MM3 310 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 SH3GL1Q99961 368 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 TAS2R14Q9NYV8 317 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 GGA2Q9UJY4 613 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 ANKRD6Q9Y2G4 727 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 DDHD2O94830 711 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 DLGAP3O95886 979 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 GLIS3Q8NEA6 775 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 MROH8Q9H579 483 aa16.86■□□□□ 0.29
COL7A1-210ENST00000487017 SNX3O60493 162 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 GSNP06396 782 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 HPCAP84074 193 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 DPYSL3Q14195 570 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 ZPBP2Q6X784 338 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 FAM136AQ96C01 138 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 TMEM245Q9H330 911 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 ZFYVE28Q9HCC9 887 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 NT5MQ9NPB1 228 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 NMRK1Q9NWW6 199 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 PNMA8BQ9ULN7 279 aaPredicted RBP16.85■□□□□ 0.29
COL7A1-210ENST00000487017 SAC3D1A6NKF1 404 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 F8W810 466 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 PLA2G6O60733 806 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 MYBL2P10244 700 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 FASP25445 335 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 RGS2P41220 211 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 NPY2RP49146 381 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 R3HDM1Q15032 1099 aaKnown RBP16.85■□□□□ 0.29
COL7A1-210ENST00000487017 C1orf186Q6ZWK4 172 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 PTAR1Q7Z6K3 402 aaPredicted RBP16.85■□□□□ 0.29
COL7A1-210ENST00000487017 TRAPPC9Q96Q05 1148 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 CEP41Q9BYV8 373 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 KCNK4Q9NYG8 393 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 DSEQ9UL01 958 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 EPHB6O15197 1021 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 GUCA1CO95843 209 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 CYP1A2P05177 515 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 IRGCQ6NXR0 463 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 PRMT9Q6P2P2 845 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 NMRK2Q9NPI5 230 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 GIMAP4Q9NUV9 329 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 A0A096LPK6 155 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 ANKRD63C9JTQ0 380 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 SMNDC1O75940 238 aaKnown RBP eCLIP16.85■□□□□ 0.29
COL7A1-210ENST00000487017 BAIAP3O94812 1187 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 YY1P25490 414 aa16.85■□□□□ 0.29
COL7A1-210ENST00000487017 CDK7P50613 346 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms