RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 DDX20Q9UHI6 824 aaKnown RBP4.73□□□□□ -1.65
SNRNP40-205ENST00000486941 TTC28Q96AY4 2481 aa4.73□□□□□ -1.65
SNRNP40-205ENST00000486941 LTBP2Q14767 1821 aa4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 PARP14Q460N5 1801 aa4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 ZNF236Q9UL36 1845 aa4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 BAZ2AQ9UIF9 1905 aaKnown RBP4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 SLC43A1O75387 559 aa4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 CYBAP13498 195 aa4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 CNGA1P29973 690 aa4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 CYP2C19P33261 490 aa4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 SOX5P35711 763 aa4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 EXOSC10Q01780 885 aaKnown RBP4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 FPGSQ05932 587 aa4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 TTF1Q15361 905 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 HSP90AB4PQ58FF6 505 aa4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 WDR78Q5VTH9 848 aa4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 SLC39A5Q6ZMH5 540 aa4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 CLNKQ7Z7G1 428 aa4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 ABRAQ8N0Z2 381 aa4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 TRPV1Q8NER1 839 aa4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 TOR1AIP2Q8NFQ8 470 aa4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 TMX3Q96JJ7 454 aa4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 MRGPRX4Q96LA9 322 aa4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 HEPHQ9BQS7 1158 aa4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 MOV10L1Q9BXT6 1211 aaKnown RBP4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 CRNKL1Q9BZJ0 848 aaKnown RBP4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 SPATC1LQ9H0A9 340 aa4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 MROH8Q9H579 483 aa4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 RPAP3Q9H6T3 665 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 SLC5A4Q9NY91 659 aa4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 LIMCH1Q9UPQ0 1083 aa4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 NAV1Q8NEY1 1877 aa4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 PLXNA1Q9UIW2 1896 aa4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 DNAH12Q6ZR08 3092 aa4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 COL11A1P12107 1806 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-205ENST00000486941 A0A1W2PRG0 241 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 KBTBD13C9JR72 458 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 TP73O15350 636 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 SEPT4O43236 478 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 PCDHGA12O60330 932 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 RHOP08100 348 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 GPD1P21695 349 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 LPOP22079 712 aaPredicted RBP4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 ADORA2AP29274 412 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 ANXA11P50995 505 aaKnown RBP4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 RPS7P62081 194 aaKnown RBP4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 IL10RAQ13651 578 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 C3orf36Q3SXR2 165 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 SLC9C2Q5TAH2 1124 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 CEP85Q6P2H3 762 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 GIMAP6Q6P9H5 292 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 ZNF782Q6ZMW2 699 aaPredicted RBP4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 TMEM179Q6ZVK1 233 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 GRASPQ7Z6J2 395 aaPredicted RBP4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 NOP9Q86U38 636 aaKnown RBP4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 AACSQ86V21 672 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 ITPRIPQ8IWB1 547 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 FTSJ3Q8IY81 847 aaKnown RBP4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 PDPRQ8NCN5 879 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 HASPINQ8TF76 798 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 JADE3Q92613 823 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 GUCD1Q96NT3 240 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 SH2D4AQ9H788 454 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 MCM9Q9NXL9 1143 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 SERGEFQ9UGK8 458 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 SWAP70Q9UH65 585 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 NRBP1Q9UHY1 535 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 ADAMTS5Q9UNA0 930 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 IPPQ9Y573 584 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 PCDHB1Q9Y5F3 818 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 PCDHGA9Q9Y5G4 932 aaKnown RBP4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 PCDHGA8Q9Y5G5 932 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 PCDHGA7Q9Y5G6 932 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 PCDHGA6Q9Y5G7 932 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 PCDHGA3Q9Y5H0 932 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 MYH7P12883 1935 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 A0A0G2JMZ2 1700 aa4.71□□□□□ -1.66
SNRNP40-205ENST00000486941 TLDC2A0PJX2 215 aa4.7□□□□□ -1.66
SNRNP40-205ENST00000486941 PRSS29PA6NIE9 313 aa4.7□□□□□ -1.66
SNRNP40-205ENST00000486941 MPHOSPH10O00566 681 aaKnown RBP4.7□□□□□ -1.66
SNRNP40-205ENST00000486941 WDR46O15213 610 aaKnown RBP4.7□□□□□ -1.66
SNRNP40-205ENST00000486941 FLOT1O75955 427 aa4.7□□□□□ -1.66
SNRNP40-205ENST00000486941 SLC25A27O95847 323 aa4.7□□□□□ -1.66
SNRNP40-205ENST00000486941 C5AR1P21730 350 aa4.7□□□□□ -1.66
SNRNP40-205ENST00000486941 PCSK6P29122 969 aa4.7□□□□□ -1.66
SNRNP40-205ENST00000486941 CREMQ03060 361 aa4.7□□□□□ -1.66
SNRNP40-205ENST00000486941 LRRC41Q15345 812 aa4.7□□□□□ -1.66
SNRNP40-205ENST00000486941 SHHQ15465 462 aa4.7□□□□□ -1.66
SNRNP40-205ENST00000486941 PABPC1LQ4VXU2 614 aaKnown RBP4.7□□□□□ -1.66
SNRNP40-205ENST00000486941 KIAA1755Q5JYT7 1200 aa4.7□□□□□ -1.66
SNRNP40-205ENST00000486941 PRAMEF19Q5SWL8 479 aa4.7□□□□□ -1.66
SNRNP40-205ENST00000486941 FCRLBQ6BAA4 426 aa4.7□□□□□ -1.66
SNRNP40-205ENST00000486941 RPAP2Q8IXW5 612 aaPredicted RBP4.7□□□□□ -1.66
SNRNP40-205ENST00000486941 CLASRPQ8N2M8 674 aaKnown RBP4.7□□□□□ -1.66
SNRNP40-205ENST00000486941 NLGN4YQ8NFZ3 816 aaPredicted RBP4.7□□□□□ -1.66
SNRNP40-205ENST00000486941 SDR42E1Q8WUS8 393 aa4.7□□□□□ -1.66
SNRNP40-205ENST00000486941 RFKQ969G6 155 aa4.7□□□□□ -1.66
SNRNP40-205ENST00000486941 PGBD1Q96JS3 809 aa4.7□□□□□ -1.66
SNRNP40-205ENST00000486941 CCDC17Q96LX7 622 aa4.7□□□□□ -1.66
SNRNP40-205ENST00000486941 VCPKMTQ9H867 229 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms