RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 BRCC3P46736 316 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 CACNA2D1P54289 1103 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 GEMIN4P57678 1058 aaKnown RBP21.09■□□□□ 0.97
HPS3-206ENST00000486530 FAM171BQ6P995 826 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 CD300LGQ6UXG3 332 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 GPRIN1Q7Z2K8 1008 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 CPLX4Q7Z7G2 160 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 TRABD2AQ86V40 505 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 SH3TC2Q8TF17 1288 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 RNF139Q8WU17 664 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 ACSS3Q9H6R3 686 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 ARHGEF4Q9NR80 690 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 TMEM30AQ9NV96 361 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 DTLQ9NZJ0 730 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 PHF24Q9UPV7 400 aa21.09■□□□□ 0.97
HPS3-206ENST00000486530 COL4A4P53420 1690 aaPredicted RBP21.08■□□□□ 0.97
HPS3-206ENST00000486530 YJEFN3A6XGL0 299 aa21.08■□□□□ 0.97
HPS3-206ENST00000486530 E7ENQ6 273 aa21.08■□□□□ 0.97
HPS3-206ENST00000486530 GCATO75600 419 aa21.08■□□□□ 0.97
HPS3-206ENST00000486530 FYNP06241 537 aa21.08■□□□□ 0.97
HPS3-206ENST00000486530 SSTR1P30872 391 aa21.08■□□□□ 0.97
HPS3-206ENST00000486530 C1QTNF8P60827 252 aa21.08■□□□□ 0.97
HPS3-206ENST00000486530 NME3Q13232 169 aa21.08■□□□□ 0.97
HPS3-206ENST00000486530 PAN2Q504Q3 1202 aaKnown RBP21.08■□□□□ 0.97
HPS3-206ENST00000486530 KCNT2Q6UVM3 1135 aa21.08■□□□□ 0.97
HPS3-206ENST00000486530 C3orf62Q6ZUJ4 267 aa21.08■□□□□ 0.97
HPS3-206ENST00000486530 SLC7A14Q8TBB6 771 aa21.08■□□□□ 0.97
HPS3-206ENST00000486530 DYDC1Q8WWB3 177 aa21.08■□□□□ 0.97
HPS3-206ENST00000486530 NTAN1Q96AB6 310 aa21.08■□□□□ 0.97
HPS3-206ENST00000486530 PGAP3Q96FM1 320 aaPredicted RBP21.08■□□□□ 0.97
HPS3-206ENST00000486530 OLFM3Q96PB7 478 aa21.08■□□□□ 0.97
HPS3-206ENST00000486530 STARD7Q9NQZ5 370 aa21.08■□□□□ 0.97
HPS3-206ENST00000486530 PIGVQ9NUD9 493 aa21.08■□□□□ 0.97
HPS3-206ENST00000486530 FAM169AQ9Y6X4 670 aa21.08■□□□□ 0.97
HPS3-206ENST00000486530 SYNJ2BP-COX16A0A087WUM0 186 aa21.07■□□□□ 0.96
HPS3-206ENST00000486530 SPAG6O75602 509 aa21.07■□□□□ 0.96
HPS3-206ENST00000486530 LTFP02788 710 aa21.07■□□□□ 0.96
HPS3-206ENST00000486530 QPCTQ16769 361 aa21.07■□□□□ 0.96
HPS3-206ENST00000486530 HEATR6Q6AI08 1181 aaKnown RBP21.07■□□□□ 0.96
HPS3-206ENST00000486530 VPS52Q8N1B4 723 aa21.07■□□□□ 0.96
HPS3-206ENST00000486530 CCDC110Q8TBZ0 833 aa21.07■□□□□ 0.96
HPS3-206ENST00000486530 RSPH1Q8WYR4 309 aa21.07■□□□□ 0.96
HPS3-206ENST00000486530 IRGQQ8WZA9 623 aa21.07■□□□□ 0.96
HPS3-206ENST00000486530 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.07■□□□□ 0.96
HPS3-206ENST00000486530 RGS18Q9NS28 235 aa21.07■□□□□ 0.96
HPS3-206ENST00000486530 COX16Q9P0S2 106 aa21.07■□□□□ 0.96
HPS3-206ENST00000486530 FOXO6A8MYZ6 492 aa21.07■□□□□ 0.96
HPS3-206ENST00000486530 ARVCFO00192 962 aa21.07■□□□□ 0.96
HPS3-206ENST00000486530 DGKIO75912 1065 aa21.07■□□□□ 0.96
HPS3-206ENST00000486530 USP17L7P0C7H9 530 aa21.07■□□□□ 0.96
HPS3-206ENST00000486530 ELK3P41970 407 aa21.07■□□□□ 0.96
HPS3-206ENST00000486530 RABGGTBP53611 331 aa21.07■□□□□ 0.96
HPS3-206ENST00000486530 SCAPQ12770 1279 aa21.07■□□□□ 0.96
HPS3-206ENST00000486530 MAPRE1Q15691 268 aaKnown RBP21.07■□□□□ 0.96
HPS3-206ENST00000486530 GKAP1Q5VSY0 366 aaPredicted RBP21.07■□□□□ 0.96
HPS3-206ENST00000486530 DCLRE1AQ6PJP8 1040 aa21.07■□□□□ 0.96
HPS3-206ENST00000486530 ARHGEF18Q6ZSZ5 1173 aa21.07■□□□□ 0.96
HPS3-206ENST00000486530 TFB1MQ8WVM0 346 aaKnown RBP21.07■□□□□ 0.96
HPS3-206ENST00000486530 SUSD3Q96L08 255 aa21.07■□□□□ 0.96
HPS3-206ENST00000486530 NKIRAS1Q9NYS0 192 aa21.07■□□□□ 0.96
HPS3-206ENST00000486530 CHMP2BQ9UQN3 213 aa21.07■□□□□ 0.96
HPS3-206ENST00000486530 TEX264Q9Y6I9 313 aa21.07■□□□□ 0.96
HPS3-206ENST00000486530 IFNAR2P48551 515 aa21.06■□□□□ 0.96
HPS3-206ENST00000486530 THEM5Q8N1Q8 247 aa21.06■□□□□ 0.96
HPS3-206ENST00000486530 SCML4Q8N228 414 aa21.06■□□□□ 0.96
HPS3-206ENST00000486530 ANKRD42Q8N9B4 389 aa21.06■□□□□ 0.96
HPS3-206ENST00000486530 MCUQ8NE86 351 aa21.06■□□□□ 0.96
HPS3-206ENST00000486530 MGARPQ8TDB4 240 aa21.06■□□□□ 0.96
HPS3-206ENST00000486530 FBF1Q8TES7 1133 aa21.06■□□□□ 0.96
HPS3-206ENST00000486530 HASPINQ8TF76 798 aa21.06■□□□□ 0.96
HPS3-206ENST00000486530 PKMYT1Q99640 499 aa21.06■□□□□ 0.96
HPS3-206ENST00000486530 ETNK1Q9HBU6 452 aa21.06■□□□□ 0.96
HPS3-206ENST00000486530 PNPLA8Q9NP80 782 aa21.06■□□□□ 0.96
HPS3-206ENST00000486530 DMAP1Q9NPF5 467 aaPredicted RBP21.06■□□□□ 0.96
HPS3-206ENST00000486530 EEF2KO00418 725 aaKnown RBP21.05■□□□□ 0.96
HPS3-206ENST00000486530 MFSD11O43934 449 aa21.05■□□□□ 0.96
HPS3-206ENST00000486530 EOMESO95936 686 aa21.05■□□□□ 0.96
HPS3-206ENST00000486530 NCAM1P13591 858 aa21.05■□□□□ 0.96
HPS3-206ENST00000486530 KRT15P19012 456 aa21.05■□□□□ 0.96
HPS3-206ENST00000486530 TYMPP19971 482 aa21.05■□□□□ 0.96
HPS3-206ENST00000486530 MBTPS1Q14703 1052 aa21.05■□□□□ 0.96
HPS3-206ENST00000486530 OVOS1Q6IE37 1185 aa21.05■□□□□ 0.96
HPS3-206ENST00000486530 BHLHA9Q7RTU4 235 aa21.05■□□□□ 0.96
HPS3-206ENST00000486530 CACNA2D3Q8IZS8 1091 aa21.05■□□□□ 0.96
HPS3-206ENST00000486530 SEC16BQ96JE7 1060 aa21.05■□□□□ 0.96
HPS3-206ENST00000486530 DHRS4Q9BTZ2 278 aa21.05■□□□□ 0.96
HPS3-206ENST00000486530 NSRP1Q9H0G5 558 aaKnown RBP21.05■□□□□ 0.96
HPS3-206ENST00000486530 UNC93B1Q9H1C4 597 aa21.05■□□□□ 0.96
HPS3-206ENST00000486530 WDR6Q9NNW5 1121 aaKnown RBP21.05■□□□□ 0.96
HPS3-206ENST00000486530 F9P00740 461 aa21.05■□□□□ 0.96
HPS3-206ENST00000486530 APRTP07741 180 aa21.05■□□□□ 0.96
HPS3-206ENST00000486530 TPSB2P20231 275 aa21.05■□□□□ 0.96
HPS3-206ENST00000486530 ADRA1BP35368 520 aa21.05■□□□□ 0.96
HPS3-206ENST00000486530 CDK7P50613 346 aa21.05■□□□□ 0.96
HPS3-206ENST00000486530 CORO7P57737 925 aa21.05■□□□□ 0.96
HPS3-206ENST00000486530 TSPY1Q01534 308 aa21.05■□□□□ 0.96
HPS3-206ENST00000486530 DPYSQ14117 519 aa21.05■□□□□ 0.96
HPS3-206ENST00000486530 LRRC14Q15048 493 aa21.05■□□□□ 0.96
HPS3-206ENST00000486530 TPSAB1Q15661 275 aa21.05■□□□□ 0.96
HPS3-206ENST00000486530 FAXCQ5TGI0 409 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms