RNA–Protein interactions for RNA: ENST00000486335.1

CCDC142-208, Transcript of coiled-coil domain containing 142, humanhuman

TSL 5

Gene CCDC142, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-208ENST00000486335 LIMA1Q9UHB6 759 aaKnown RBP9.73□□□□□ -0.85
CCDC142-208ENST00000486335 CHORDC1Q9UHD1 332 aaPredicted RBP9.73□□□□□ -0.85
CCDC142-208ENST00000486335 FBXO10Q9UK96 956 aa9.73□□□□□ -0.85
CCDC142-208ENST00000486335 CDH9Q9ULB4 789 aa9.73□□□□□ -0.85
CCDC142-208ENST00000486335 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.73□□□□□ -0.85
CCDC142-208ENST00000486335 PCDHGB2Q9Y5G2 931 aa9.73□□□□□ -0.85
CCDC142-208ENST00000486335 A0A1B0GVT2 93 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 TRIM49BA6NDI0 452 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 GOLGA8CPA6NN73 597 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 PLK4O00444 970 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 CLDN5O00501 218 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 TGFB1I1O43294 461 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 MBL2P11226 248 aaPredicted RBP9.72□□□□□ -0.85
CCDC142-208ENST00000486335 NCAM1P13591 858 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 CDK11BP21127 795 aaKnown RBP9.72□□□□□ -0.85
CCDC142-208ENST00000486335 WARSP23381 471 aaKnown RBP9.72□□□□□ -0.85
CCDC142-208ENST00000486335 EEF1GP26641 437 aaKnown RBP9.72□□□□□ -0.85
CCDC142-208ENST00000486335 PCSK1P29120 753 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 CDC25BP30305 580 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 PPP3CCP48454 512 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 PDE6CP51160 858 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 MARSP56192 900 aaKnown RBP9.72□□□□□ -0.85
CCDC142-208ENST00000486335 ENPP2Q13822 863 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 NR1I3Q14994 352 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 TPD52L1Q16890 204 aaPredicted RBP9.72□□□□□ -0.85
CCDC142-208ENST00000486335 FUT11Q495W5 492 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 TCP11X2Q5H9J9 407 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 DCAF12L1Q5VU92 463 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 DHRS13Q6UX07 377 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 DPH6Q7L8W6 267 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 TRMT11Q7Z4G4 463 aaKnown RBP9.72□□□□□ -0.85
CCDC142-208ENST00000486335 ZNF605Q86T29 641 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 PDCD7Q8N8D1 485 aaKnown RBP9.72□□□□□ -0.85
CCDC142-208ENST00000486335 GOLGA5Q8TBA6 731 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 POMGNT1Q8WZA1 660 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 FOXJ1Q92949 421 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 OTUB2Q96DC9 234 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 CEP63Q96MT8 703 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 DCBLD2Q96PD2 775 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 TSG101Q99816 390 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 ORAI3Q9BRQ5 295 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 CBWD1Q9BRT8 395 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 GPR174Q9BXC1 333 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 B3GNT5Q9BYG0 378 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 ZNF518BQ9C0D4 1074 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 MTMR12Q9C0I1 747 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 DPEP3Q9H4B8 488 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 CCSER2Q9H7U1 834 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 GMIPQ9P107 970 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 SUSD2Q9UGT4 822 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 SNX11Q9Y5W9 270 aa9.72□□□□□ -0.85
CCDC142-208ENST00000486335 ARID1BQ8NFD5 2236 aaPredicted RBP9.71□□□□□ -0.85
CCDC142-208ENST00000486335 A0A1B0GTH6 734 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 FAM92AA1XBS5 289 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 GOLGA8IPA6NC78 632 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 GOLGA8JA6NMD2 632 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 BCAT2O15382 392 aaPredicted RBP9.71□□□□□ -0.86
CCDC142-208ENST00000486335 CBFA2T2O43439 604 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 CALUO43852 315 aaPredicted RBP9.71□□□□□ -0.86
CCDC142-208ENST00000486335 CACNG3O60359 315 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 PRPF6O94906 941 aaKnown RBP9.71□□□□□ -0.86
CCDC142-208ENST00000486335 GNA14O95837 355 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 TBX18O95935 607 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 ABL1P00519 1130 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 CST3P01034 146 aaPredicted RBP9.71□□□□□ -0.86
CCDC142-208ENST00000486335 IGLV3-19P01714 112 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 C7P10643 843 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 GNSP15586 552 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 MATKP42679 507 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 ABCG1P45844 678 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 CSNK1EP49674 416 aaKnown RBP9.71□□□□□ -0.86
CCDC142-208ENST00000486335 TPMTP51580 245 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 UBASH3AP57075 661 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 MCCD1P59942 119 aaPredicted RBP9.71□□□□□ -0.86
CCDC142-208ENST00000486335 RBP5P82980 135 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 CYP27A1Q02318 531 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 MDH1BQ5I0G3 518 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 WDR45BQ5MNZ6 344 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 SYCP2LQ5T4T6 812 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 LAYNQ6UX15 382 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 C4orf50Q6ZRC1 276 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 HTR3DQ70Z44 454 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 SLC9A9Q8IVB4 645 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 FAM114A1Q8IWE2 563 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 C12orf56Q8IXR9 622 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 CHPFQ8IZ52 775 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 LSM14AQ8ND56 463 aaKnown RBP9.71□□□□□ -0.86
CCDC142-208ENST00000486335 CADM4Q8NFZ8 388 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 NAP1L5Q96NT1 182 aaPredicted RBP9.71□□□□□ -0.86
CCDC142-208ENST00000486335 KCNK16Q96T55 309 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 CDC6Q99741 560 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 KLF16Q9BXK1 252 aaPredicted RBP9.71□□□□□ -0.86
CCDC142-208ENST00000486335 SEMA4CQ9C0C4 833 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 DNAJC17Q9NVM6 304 aaKnown RBP9.71□□□□□ -0.86
CCDC142-208ENST00000486335 DMAC2Q9NW81 257 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 IFNKQ9P0W0 207 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 EIF2B4Q9UI10 523 aaKnown RBP9.71□□□□□ -0.86
CCDC142-208ENST00000486335 ITGA11Q9UKX5 1188 aa9.71□□□□□ -0.86
CCDC142-208ENST00000486335 PYCARD-AS1I3L0S3 204 aa9.7□□□□□ -0.86
CCDC142-208ENST00000486335 CBX4O00257 560 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms