RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 PDK1Q15118 436 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 PRKD1Q15139 912 aaPredicted RBP12.39□□□□□ -0.43
PKP4-213ENST00000486254 ANKRD22Q5VYY1 191 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 C1orf228Q6PIY5 440 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 LRRC8DQ7L1W4 858 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 NLRP14Q86W24 1093 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 FAM131BQ86XD5 332 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 COLGALT2Q8IYK4 626 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 VPS52Q8N1B4 723 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 LINC01599Q8WXQ3 324 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 PWWP2AQ96N64 755 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 OXCT2Q9BYC2 517 aaPredicted RBP12.39□□□□□ -0.43
PKP4-213ENST00000486254 TANC1Q9C0D5 1861 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 XAB2Q9HCS7 855 aaKnown RBP12.39□□□□□ -0.43
PKP4-213ENST00000486254 PIGVQ9NUD9 493 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 TMEM30AQ9NV96 361 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 PRDM4Q9UKN5 801 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 HEY1Q9Y5J3 304 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 TEX264Q9Y6I9 313 aa12.39□□□□□ -0.43
PKP4-213ENST00000486254 A0A0A0MRY4 1105 aa12.38□□□□□ -0.43
PKP4-213ENST00000486254 EBAG9O00559 213 aa12.38□□□□□ -0.43
PKP4-213ENST00000486254 PPP1R12AO14974 1030 aaPredicted RBP12.38□□□□□ -0.43
PKP4-213ENST00000486254 DCLK1O15075 740 aa12.38□□□□□ -0.43
PKP4-213ENST00000486254 MTSS1O43312 755 aa12.38□□□□□ -0.43
PKP4-213ENST00000486254 HOXA2O43364 376 aa12.38□□□□□ -0.43
PKP4-213ENST00000486254 FAM155BO75949 473 aa12.38□□□□□ -0.43
PKP4-213ENST00000486254 STK10O94804 968 aaKnown RBP12.38□□□□□ -0.43
PKP4-213ENST00000486254 MLNP12872 115 aa12.38□□□□□ -0.43
PKP4-213ENST00000486254 CHN1P15882 459 aa12.38□□□□□ -0.43
PKP4-213ENST00000486254 RBL1P28749 1068 aa12.38□□□□□ -0.43
PKP4-213ENST00000486254 SLCO1A2P46721 670 aa12.38□□□□□ -0.43
PKP4-213ENST00000486254 NDUFV1P49821 464 aa12.38□□□□□ -0.43
PKP4-213ENST00000486254 ATXN1P54253 815 aaKnown RBP12.38□□□□□ -0.43
PKP4-213ENST00000486254 GBE1Q04446 702 aa12.38□□□□□ -0.43
PKP4-213ENST00000486254 EIF4EBP2Q13542 120 aaPredicted RBP12.38□□□□□ -0.43
PKP4-213ENST00000486254 FASTKD3Q14CZ7 662 aaKnown RBP12.38□□□□□ -0.43
PKP4-213ENST00000486254 NFE2Q16621 373 aaPredicted RBP12.38□□□□□ -0.43
PKP4-213ENST00000486254 CLLU1OSQ5K130 101 aa12.38□□□□□ -0.43
PKP4-213ENST00000486254 SYPL2Q5VXT5 272 aa12.38□□□□□ -0.43
PKP4-213ENST00000486254 HEATR6Q6AI08 1181 aaKnown RBP12.38□□□□□ -0.43
PKP4-213ENST00000486254 KCNT2Q6UVM3 1135 aa12.38□□□□□ -0.43
PKP4-213ENST00000486254 VSTM1Q6UX27 236 aa12.38□□□□□ -0.43
PKP4-213ENST00000486254 RFX8Q6ZV50 586 aa12.38□□□□□ -0.43
PKP4-213ENST00000486254 GPRIN1Q7Z2K8 1008 aa12.38□□□□□ -0.43
PKP4-213ENST00000486254 RTN4RL1Q86UN2 441 aaPredicted RBP12.38□□□□□ -0.43
PKP4-213ENST00000486254 RNF169Q8NCN4 708 aa12.38□□□□□ -0.43
PKP4-213ENST00000486254 OR10T2Q8NGX3 314 aa12.38□□□□□ -0.43
PKP4-213ENST00000486254 TFB1MQ8WVM0 346 aaKnown RBP12.38□□□□□ -0.43
PKP4-213ENST00000486254 SPATA13Q96N96 652 aa12.38□□□□□ -0.43
PKP4-213ENST00000486254 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.38□□□□□ -0.43
PKP4-213ENST00000486254 TRPV6Q9H1D0 765 aa12.38□□□□□ -0.43
PKP4-213ENST00000486254 INTS9Q9NV88 658 aaKnown RBP12.38□□□□□ -0.43
PKP4-213ENST00000486254 ETNK2Q9NVF9 386 aa12.38□□□□□ -0.43
PKP4-213ENST00000486254 DNAJC17Q9NVM6 304 aaKnown RBP12.38□□□□□ -0.43
PKP4-213ENST00000486254 PSMC3IPQ9P2W1 217 aaPredicted RBP12.38□□□□□ -0.43
PKP4-213ENST00000486254 CACNG4Q9UBN1 327 aa12.38□□□□□ -0.43
PKP4-213ENST00000486254 NAALADL1Q9UQQ1 740 aa12.38□□□□□ -0.43
PKP4-213ENST00000486254 TIMM13Q9Y5L4 95 aaPredicted RBP12.38□□□□□ -0.43
PKP4-213ENST00000486254 TTC3P53804 2025 aa12.37□□□□□ -0.43
PKP4-213ENST00000486254 SMIM23A6NLE4 172 aa12.37□□□□□ -0.43
PKP4-213ENST00000486254 PRPF4O43172 522 aaKnown RBP eCLIP12.37□□□□□ -0.43
PKP4-213ENST00000486254 MYCNP04198 464 aaPredicted RBP12.37□□□□□ -0.43
PKP4-213ENST00000486254 GOT1P17174 413 aa12.37□□□□□ -0.43
PKP4-213ENST00000486254 GCAP28676 217 aa12.37□□□□□ -0.43
PKP4-213ENST00000486254 MAGEA11P43364 429 aa12.37□□□□□ -0.43
PKP4-213ENST00000486254 BRCC3P46736 316 aa12.37□□□□□ -0.43
PKP4-213ENST00000486254 CACNA2D1P54289 1103 aa12.37□□□□□ -0.43
PKP4-213ENST00000486254 GEMIN4P57678 1058 aaKnown RBP12.37□□□□□ -0.43
PKP4-213ENST00000486254 GPX6P59796 221 aa12.37□□□□□ -0.43
PKP4-213ENST00000486254 SMARCB1Q12824 385 aa12.37□□□□□ -0.43
PKP4-213ENST00000486254 SLC10A2Q12908 348 aaPredicted RBP12.37□□□□□ -0.43
PKP4-213ENST00000486254 PLEKHG4Q58EX7 1191 aa12.37□□□□□ -0.43
PKP4-213ENST00000486254 BRMS1LQ5PSV4 323 aa12.37□□□□□ -0.43
PKP4-213ENST00000486254 HFE2Q6ZVN8 426 aa12.37□□□□□ -0.43
PKP4-213ENST00000486254 CYS1Q717R9 158 aa12.37□□□□□ -0.43
PKP4-213ENST00000486254 TRABD2AQ86V40 505 aa12.37□□□□□ -0.43
PKP4-213ENST00000486254 FAM126BQ8IXS8 530 aa12.37□□□□□ -0.43
PKP4-213ENST00000486254 DCP1BQ8IZD4 617 aaKnown RBP12.37□□□□□ -0.43
PKP4-213ENST00000486254 SLC7A14Q8TBB6 771 aa12.37□□□□□ -0.43
PKP4-213ENST00000486254 HTR3CQ8WXA8 447 aa12.37□□□□□ -0.43
PKP4-213ENST00000486254 SGSM3Q96HU1 749 aa12.37□□□□□ -0.43
PKP4-213ENST00000486254 ZNF317Q96PQ6 595 aaPredicted RBP12.37□□□□□ -0.43
PKP4-213ENST00000486254 CCT8L2Q96SF2 557 aa12.37□□□□□ -0.43
PKP4-213ENST00000486254 KCNK16Q96T55 309 aa12.37□□□□□ -0.43
PKP4-213ENST00000486254 WDR83Q9BRX9 315 aaKnown RBP12.37□□□□□ -0.43
PKP4-213ENST00000486254 COLEC11Q9BWP8 271 aa12.37□□□□□ -0.43
PKP4-213ENST00000486254 ZCWPW1Q9H0M4 648 aa12.37□□□□□ -0.43
PKP4-213ENST00000486254 OSBPL2Q9H1P3 480 aa12.37□□□□□ -0.43
PKP4-213ENST00000486254 VPS37BQ9H9H4 285 aa12.37□□□□□ -0.43
PKP4-213ENST00000486254 RAB6BQ9NRW1 208 aa12.37□□□□□ -0.43
PKP4-213ENST00000486254 TBC1D13Q9NVG8 400 aa12.37□□□□□ -0.43
PKP4-213ENST00000486254 SMG5Q9UPR3 1016 aaKnown RBP12.37□□□□□ -0.43
PKP4-213ENST00000486254 INPP5FQ9Y2H2 1132 aa12.37□□□□□ -0.43
PKP4-213ENST00000486254 EEF2KO00418 725 aaKnown RBP12.36□□□□□ -0.43
PKP4-213ENST00000486254 TRDMT1O14717 391 aaKnown RBP12.36□□□□□ -0.43
PKP4-213ENST00000486254 TNFRSF10BO14763 440 aa12.36□□□□□ -0.43
PKP4-213ENST00000486254 USP17L7P0C7H9 530 aa12.36□□□□□ -0.43
PKP4-213ENST00000486254 NCAM1P13591 858 aa12.36□□□□□ -0.43
PKP4-213ENST00000486254 MX2P20592 715 aa12.36□□□□□ -0.43
PKP4-213ENST00000486254 STX2P32856 288 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms