RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 DDIT4Q9NX09 232 aa16.13■□□□□ 0.17
RPUSD3-217ENST00000485705 DUS2Q9NX74 493 aaKnown RBP16.13■□□□□ 0.17
RPUSD3-217ENST00000485705 COL4A2P08572 1712 aa16.13■□□□□ 0.17
RPUSD3-217ENST00000485705 COL4A3Q01955 1670 aa16.12■□□□□ 0.17
RPUSD3-217ENST00000485705 MIA3Q5JRA6 1907 aa16.12■□□□□ 0.17
RPUSD3-217ENST00000485705 ANKRD62A6NC57 917 aa16.12■□□□□ 0.17
RPUSD3-217ENST00000485705 OTOL1A6NHN0 477 aaPredicted RBP16.12■□□□□ 0.17
RPUSD3-217ENST00000485705 MYBL1P10243 752 aa16.12■□□□□ 0.17
RPUSD3-217ENST00000485705 PDGFRAP16234 1089 aa16.12■□□□□ 0.17
RPUSD3-217ENST00000485705 IFNAR2P48551 515 aa16.12■□□□□ 0.17
RPUSD3-217ENST00000485705 GSDMDP57764 484 aa16.12■□□□□ 0.17
RPUSD3-217ENST00000485705 ATP11AP98196 1134 aa16.12■□□□□ 0.17
RPUSD3-217ENST00000485705 NME3Q13232 169 aa16.12■□□□□ 0.17
RPUSD3-217ENST00000485705 EML3Q32P44 896 aa16.12■□□□□ 0.17
RPUSD3-217ENST00000485705 SLC25A52Q3SY17 297 aa16.12■□□□□ 0.17
RPUSD3-217ENST00000485705 ZC3H12AQ5D1E8 599 aaKnown RBP16.12■□□□□ 0.17
RPUSD3-217ENST00000485705 DCUN1D2Q6PH85 259 aa16.12■□□□□ 0.17
RPUSD3-217ENST00000485705 DENND1CQ8IV53 801 aa16.12■□□□□ 0.17
RPUSD3-217ENST00000485705 CCDC170Q8IYT3 715 aa16.12■□□□□ 0.17
RPUSD3-217ENST00000485705 TTC8Q8TAM2 541 aa16.12■□□□□ 0.17
RPUSD3-217ENST00000485705 PLD4Q96BZ4 506 aa16.12■□□□□ 0.17
RPUSD3-217ENST00000485705 TRIM11Q96F44 468 aa16.12■□□□□ 0.17
RPUSD3-217ENST00000485705 COL25A1Q9BXS0 654 aaPredicted RBP16.12■□□□□ 0.17
RPUSD3-217ENST00000485705 LSM7Q9UK45 103 aaKnown RBP16.12■□□□□ 0.17
RPUSD3-217ENST00000485705 AGO1Q9UL18 857 aaKnown RBP16.12■□□□□ 0.17
RPUSD3-217ENST00000485705 STAP1Q9ULZ2 295 aa16.12■□□□□ 0.17
RPUSD3-217ENST00000485705 TLR6Q9Y2C9 796 aa16.12■□□□□ 0.17
RPUSD3-217ENST00000485705 EPN1Q9Y6I3 576 aaPredicted RBP16.12■□□□□ 0.17
RPUSD3-217ENST00000485705 ATG2BQ96BY7 2078 aa16.11■□□□□ 0.17
RPUSD3-217ENST00000485705 CYP1A2P05177 515 aa16.11■□□□□ 0.17
RPUSD3-217ENST00000485705 H2AFZP0C0S5 128 aa16.11■□□□□ 0.17
RPUSD3-217ENST00000485705 GPD1P21695 349 aa16.11■□□□□ 0.17
RPUSD3-217ENST00000485705 GBP1P32455 592 aa16.11■□□□□ 0.17
RPUSD3-217ENST00000485705 KPNA1P52294 538 aaPredicted RBP16.11■□□□□ 0.17
RPUSD3-217ENST00000485705 NNTQ13423 1086 aa16.11■□□□□ 0.17
RPUSD3-217ENST00000485705 CDO1Q16878 200 aa16.11■□□□□ 0.17
RPUSD3-217ENST00000485705 H2AFVQ71UI9 128 aa16.11■□□□□ 0.17
RPUSD3-217ENST00000485705 BNIPLQ7Z465 357 aa16.11■□□□□ 0.17
RPUSD3-217ENST00000485705 IRF7Q92985 503 aa16.11■□□□□ 0.17
RPUSD3-217ENST00000485705 SLC2A4RGQ9NR83 387 aa16.11■□□□□ 0.17
RPUSD3-217ENST00000485705 PIGVQ9NUD9 493 aa16.11■□□□□ 0.17
RPUSD3-217ENST00000485705 RRN3Q9NYV6 651 aa16.11■□□□□ 0.17
RPUSD3-217ENST00000485705 GTSE1Q9NYZ3 720 aa16.11■□□□□ 0.17
RPUSD3-217ENST00000485705 XPO7Q9UIA9 1087 aaKnown RBP16.11■□□□□ 0.17
RPUSD3-217ENST00000485705 TFR2Q9UP52 801 aa16.11■□□□□ 0.17
RPUSD3-217ENST00000485705 TMEM191CA6NGB0 347 aa16.1■□□□□ 0.17
RPUSD3-217ENST00000485705 CCP110O43303 1012 aa16.1■□□□□ 0.17
RPUSD3-217ENST00000485705 NDUFA10O95299 355 aa16.1■□□□□ 0.17
RPUSD3-217ENST00000485705 LCA5LO95447 670 aa16.1■□□□□ 0.17
RPUSD3-217ENST00000485705 SDC4P31431 198 aa16.1■□□□□ 0.17
RPUSD3-217ENST00000485705 CYLC1P35663 651 aaPredicted RBP16.1■□□□□ 0.17
RPUSD3-217ENST00000485705 PTPN9P43378 593 aa16.1■□□□□ 0.17
RPUSD3-217ENST00000485705 HARS2P49590 506 aaKnown RBP16.1■□□□□ 0.17
RPUSD3-217ENST00000485705 ZXDAP98168 799 aa16.1■□□□□ 0.17
RPUSD3-217ENST00000485705 DEUP1Q05D60 604 aa16.1■□□□□ 0.17
RPUSD3-217ENST00000485705 RING1Q06587 406 aa16.1■□□□□ 0.17
RPUSD3-217ENST00000485705 ZNF252P-AS1Q0IIN9 211 aa16.1■□□□□ 0.17
RPUSD3-217ENST00000485705 PDGFRLQ15198 375 aa16.1■□□□□ 0.17
RPUSD3-217ENST00000485705 ADGRG2Q8IZP9 1017 aa16.1■□□□□ 0.17
RPUSD3-217ENST00000485705 KIAA1958Q8N8K9 716 aa16.1■□□□□ 0.17
RPUSD3-217ENST00000485705 NUP85Q9BW27 656 aa16.1■□□□□ 0.17
RPUSD3-217ENST00000485705 DCLK3Q9C098 648 aa16.1■□□□□ 0.17
RPUSD3-217ENST00000485705 ANLNQ9NQW6 1124 aa16.1■□□□□ 0.17
RPUSD3-217ENST00000485705 TBC1D14Q9P2M4 693 aa16.1■□□□□ 0.17
RPUSD3-217ENST00000485705 REXO2Q9Y3B8 237 aaKnown RBP16.1■□□□□ 0.17
RPUSD3-217ENST00000485705 GOLGA6L7A0A1B0GV03 622 aa16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 EIF3CLB5ME19 914 aaKnown RBP16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 I6L893 689 aaPredicted RBP16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 TRDMT1O14717 391 aaKnown RBP16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 SLC9A3R1O14745 358 aaPredicted RBP16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 DCXO43602 365 aa16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 ENDOD1O94919 500 aa16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 MOCS2O96007 188 aaPredicted RBP16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 MAGEA1P43355 309 aa16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 SOX9P48436 509 aa16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 CXCR3P49682 368 aa16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 ZNF143P52747 638 aaPredicted RBP16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 VCPP55072 806 aaKnown RBP16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 HDAC4P56524 1084 aa16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 RUNX3Q13761 415 aa16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 NUGGCQ68CJ6 796 aa16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 NADSYN1Q6IA69 706 aa16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 TMEM25Q86YD3 366 aa16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 UNC45BQ8IWX7 931 aa16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 UBALD2Q8IYN6 164 aa16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 ACRBPQ8NEB7 543 aa16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 CTNNBL1Q8WYA6 563 aaPredicted RBP16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 CENPIQ92674 756 aaPredicted RBP16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 RNF34Q969K3 372 aa16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 PGAP3Q96FM1 320 aaPredicted RBP16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 P2RY11Q96G91 374 aa16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 BTBD6Q96KE9 485 aa16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 EIF3CQ99613 913 aaKnown RBP16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 ECT2Q9H8V3 914 aa16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 TMPRSS4Q9NRS4 437 aa16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 HEBP1Q9NRV9 189 aa16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 PCDHA13Q9Y5I0 950 aa16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 SCINQ9Y6U3 715 aa16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 MYO18AQ92614 2054 aaKnown RBP16.09■□□□□ 0.17
RPUSD3-217ENST00000485705 KCNU1A8MYU2 1149 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms