RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 P4HA1P13674 534 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 EZRP15311 586 aaKnown RBP11.25□□□□□ -0.61
DDX56-212ENST00000485367 PIK3CAP42336 1068 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 USP46P62068 366 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 SARNPP82979 210 aaKnown RBP11.25□□□□□ -0.61
DDX56-212ENST00000485367 GUCY1A3Q02108 690 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 MTAPQ13126 283 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 ADAM9Q13443 819 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 NFIL3Q16649 462 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 ITPRIPL2Q3MIP1 535 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 C1orf220Q5T0J3 134 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 AGBL2Q5U5Z8 902 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 KLHDC7AQ5VTJ3 777 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 TTC19Q6DKK2 380 aaPredicted RBP11.25□□□□□ -0.61
DDX56-212ENST00000485367 DENND5BQ6ZUT9 1274 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 PARP9Q8IXQ6 854 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 SH2D3CQ8N5H7 860 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 CYFIP2Q96F07 1278 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 MSANTD3Q96H12 275 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 C8orf48Q96LL4 319 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 SLC22A12Q96S37 553 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 MED10Q9BTT4 135 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 ELOVL4Q9GZR5 314 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 SDCBP2Q9H190 292 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 MMRN2Q9H8L6 949 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 KIF9Q9HAQ2 790 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 SIK3Q9Y2K2 1263 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 VPS13AQ96RL7 3174 aa11.25□□□□□ -0.61
DDX56-212ENST00000485367 USP34Q70CQ2 3546 aa11.24□□□□□ -0.61
DDX56-212ENST00000485367 C2orf78A6NCI8 922 aa11.24□□□□□ -0.61
DDX56-212ENST00000485367 GMNCA6NCL1 334 aa11.24□□□□□ -0.61
DDX56-212ENST00000485367 MAPK13O15264 365 aa11.24□□□□□ -0.61
DDX56-212ENST00000485367 HLA-DRAP01903 254 aa11.24□□□□□ -0.61
DDX56-212ENST00000485367 GLI1P08151 1106 aa11.24□□□□□ -0.61
DDX56-212ENST00000485367 MYZAPP0CAP1 466 aa11.24□□□□□ -0.61
DDX56-212ENST00000485367 CTHP32929 405 aa11.24□□□□□ -0.61
DDX56-212ENST00000485367 PSMC2P35998 433 aaKnown RBP11.24□□□□□ -0.61
DDX56-212ENST00000485367 EIF4A3P38919 411 aaKnown RBP11.24□□□□□ -0.61
DDX56-212ENST00000485367 GCLMP48507 274 aa11.24□□□□□ -0.61
DDX56-212ENST00000485367 CACNA2D1P54289 1103 aa11.24□□□□□ -0.61
DDX56-212ENST00000485367 ZNF268Q14587 947 aaPredicted RBP11.24□□□□□ -0.61
DDX56-212ENST00000485367 MAN2A1Q16706 1144 aa11.24□□□□□ -0.61
DDX56-212ENST00000485367 ASTE1Q2TB18 679 aaPredicted RBP11.24□□□□□ -0.61
DDX56-212ENST00000485367 VWA3BQ502W6 1294 aa11.24□□□□□ -0.61
DDX56-212ENST00000485367 KCTD16Q68DU8 428 aa11.24□□□□□ -0.61
DDX56-212ENST00000485367 TRIM68Q6AZZ1 485 aa11.24□□□□□ -0.61
DDX56-212ENST00000485367 SPOPLQ6IQ16 392 aa11.24□□□□□ -0.61
DDX56-212ENST00000485367 C1orf228Q6PIY5 440 aa11.24□□□□□ -0.61
DDX56-212ENST00000485367 ZC3H14Q6PJT7 736 aaKnown RBP11.24□□□□□ -0.61
DDX56-212ENST00000485367 TSSK4Q6SA08 328 aa11.24□□□□□ -0.61
DDX56-212ENST00000485367 INTS8Q75QN2 995 aaKnown RBP11.24□□□□□ -0.61
DDX56-212ENST00000485367 ACOT1Q86TX2 421 aa11.24□□□□□ -0.61
DDX56-212ENST00000485367 RALGPS2Q86X27 583 aaPredicted RBP11.24□□□□□ -0.61
DDX56-212ENST00000485367 ARL14EPQ8N8R7 260 aaPredicted RBP11.24□□□□□ -0.61
DDX56-212ENST00000485367 TAF4BQ92750 862 aa11.24□□□□□ -0.61
DDX56-212ENST00000485367 TNIP3Q96KP6 325 aa11.24□□□□□ -0.61
DDX56-212ENST00000485367 CCDC114Q96M63 670 aa11.24□□□□□ -0.61
DDX56-212ENST00000485367 CEP295NLQ96MC4 621 aa11.24□□□□□ -0.61
DDX56-212ENST00000485367 CHRDQ9H2X0 955 aa11.24□□□□□ -0.61
DDX56-212ENST00000485367 EBF3Q9H4W6 596 aa11.24□□□□□ -0.61
DDX56-212ENST00000485367 EPB41L5Q9HCM4 733 aa11.24□□□□□ -0.61
DDX56-212ENST00000485367 EHD2Q9NZN4 543 aa11.24□□□□□ -0.61
DDX56-212ENST00000485367 TRPM5Q9NZQ8 1165 aa11.24□□□□□ -0.61
DDX56-212ENST00000485367 FBXO4Q9UKT5 387 aa11.24□□□□□ -0.61
DDX56-212ENST00000485367 NFU1Q9UMS0 254 aa11.24□□□□□ -0.61
DDX56-212ENST00000485367 ATP8B3O60423 1300 aa11.24□□□□□ -0.61
DDX56-212ENST00000485367 MYH10P35580 1976 aa11.24□□□□□ -0.61
DDX56-212ENST00000485367 E7EVH7 732 aa11.23□□□□□ -0.61
DDX56-212ENST00000485367 ASS1P00966 412 aaKnown RBP11.23□□□□□ -0.61
DDX56-212ENST00000485367 CHRNB1P11230 501 aa11.23□□□□□ -0.61
DDX56-212ENST00000485367 HDCP19113 662 aa11.23□□□□□ -0.61
DDX56-212ENST00000485367 CARSP49589 748 aaKnown RBP11.23□□□□□ -0.61
DDX56-212ENST00000485367 GUCY2DQ02846 1103 aa11.23□□□□□ -0.61
DDX56-212ENST00000485367 PPP3CAQ08209 521 aa11.23□□□□□ -0.61
DDX56-212ENST00000485367 IFRD2Q12894 506 aaPredicted RBP11.23□□□□□ -0.61
DDX56-212ENST00000485367 IFT88Q13099 833 aa11.23□□□□□ -0.61
DDX56-212ENST00000485367 ORC1Q13415 861 aa11.23□□□□□ -0.61
DDX56-212ENST00000485367 XRCC4Q13426 336 aa11.23□□□□□ -0.61
DDX56-212ENST00000485367 LRRC32Q14392 662 aa11.23□□□□□ -0.61
DDX56-212ENST00000485367 PON2Q15165 354 aa11.23□□□□□ -0.61
DDX56-212ENST00000485367 ZNF528Q3MIS6 628 aa11.23□□□□□ -0.61
DDX56-212ENST00000485367 ZCWPW2Q504Y3 356 aa11.23□□□□□ -0.61
DDX56-212ENST00000485367 CYB5D1Q6P9G0 228 aa11.23□□□□□ -0.61
DDX56-212ENST00000485367 TXNDC11Q6PKC3 985 aa11.23□□□□□ -0.61
DDX56-212ENST00000485367 FANCMQ8IYD8 2048 aa11.23□□□□□ -0.61
DDX56-212ENST00000485367 RIN3Q8TB24 985 aa11.23□□□□□ -0.61
DDX56-212ENST00000485367 EEF2KMTQ96G04 330 aa11.23□□□□□ -0.61
DDX56-212ENST00000485367 FAM83CQ9BQN1 747 aa11.23□□□□□ -0.61
DDX56-212ENST00000485367 ISCUQ9H1K1 167 aa11.23□□□□□ -0.61
DDX56-212ENST00000485367 RABEP2Q9H5N1 569 aa11.23□□□□□ -0.61
DDX56-212ENST00000485367 HPS4Q9NQG7 708 aa11.23□□□□□ -0.61
DDX56-212ENST00000485367 TMEM30AQ9NV96 361 aa11.23□□□□□ -0.61
DDX56-212ENST00000485367 GCNT4Q9P109 453 aa11.23□□□□□ -0.61
DDX56-212ENST00000485367 MYO15AQ9UKN7 3530 aa11.23□□□□□ -0.61
DDX56-212ENST00000485367 EP300Q09472 2414 aaPredicted RBP11.23□□□□□ -0.61
DDX56-212ENST00000485367 BTNL10A8MVZ5 291 aa11.23□□□□□ -0.61
DDX56-212ENST00000485367 DNAJC8O75937 253 aaPredicted RBP11.23□□□□□ -0.61
DDX56-212ENST00000485367 ARSAP15289 507 aa11.23□□□□□ -0.61
DDX56-212ENST00000485367 ASPAP45381 313 aa11.23□□□□□ -0.61
DDX56-212ENST00000485367 NDST1P52848 882 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms