RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 RGL1Q9NZL6 768 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 IL17BQ9UHF5 180 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 ASB3Q9Y575 518 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 PTPRDP23468 1912 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 MYO16Q9Y6X6 1858 aa5.79□□□□□ -1.48
PTPN4-210ENST00000485247 COL5A1P20908 1838 aaPredicted RBP5.78□□□□□ -1.48
PTPN4-210ENST00000485247 TCRBV21S2A2A0A5A6 115 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 ZBTB43O43298 467 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 GREM1O60565 184 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 KLF8O95600 359 aaPredicted RBP5.78□□□□□ -1.48
PTPN4-210ENST00000485247 MARCKSP29966 332 aaPredicted RBP5.78□□□□□ -1.48
PTPN4-210ENST00000485247 CDC25CP30307 473 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 NMT1P30419 496 aaKnown RBP5.78□□□□□ -1.48
PTPN4-210ENST00000485247 EIF4A3P38919 411 aaKnown RBP5.78□□□□□ -1.48
PTPN4-210ENST00000485247 GDNFP39905 211 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 TLE3Q04726 772 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 CCDC173Q0VFZ6 552 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 PTPN13Q12923 2485 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 GRIK2Q13002 908 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 PRPF4BQ13523 1007 aaKnown RBP5.78□□□□□ -1.48
PTPN4-210ENST00000485247 SMAD1Q15797 465 aaKnown RBP5.78□□□□□ -1.48
PTPN4-210ENST00000485247 KCNMB1Q16558 191 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 RALGPS1Q5JS13 557 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 EEF1DP3Q658K8 133 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 TXNDC8Q6A555 127 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 CENPPQ6IPU0 288 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 DHRS13Q6UX07 377 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 ITIH5Q86UX2 942 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 SLC41A1Q8IVJ1 513 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 TXNDC5Q8NBS9 432 aaKnown RBP5.78□□□□□ -1.48
PTPN4-210ENST00000485247 APPL2Q8NEU8 664 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 BICD2Q8TD16 824 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 CCDC12Q8WUD4 166 aaPredicted RBP5.78□□□□□ -1.48
PTPN4-210ENST00000485247 RNF141Q8WVD5 230 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 OSCP1Q8WVF1 389 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 NXPE2Q96DL1 559 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 DYDC2Q96IM9 177 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 ALPK1Q96QP1 1244 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 SEPT5Q99719 369 aaPredicted RBP5.78□□□□□ -1.48
PTPN4-210ENST00000485247 CDC6Q99741 560 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 TEP1Q99973 2627 aaKnown RBP5.78□□□□□ -1.48
PTPN4-210ENST00000485247 POLR3FQ9H1D9 316 aaPredicted RBP5.78□□□□□ -1.48
PTPN4-210ENST00000485247 FZD8Q9H461 694 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 ZDHHC4Q9NPG8 344 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 TDP1Q9NUW8 608 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 DUS2Q9NX74 493 aaKnown RBP5.78□□□□□ -1.48
PTPN4-210ENST00000485247 ADAMTS1Q9UHI8 967 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 PTPRQQ9UMZ3 2332 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 SRPK3Q9UPE1 567 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 TIMM13Q9Y5L4 95 aaPredicted RBP5.78□□□□□ -1.48
PTPN4-210ENST00000485247 WNT6Q9Y6F9 365 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 COL6A6A6NMZ7 2263 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 ARID2Q68CP9 1835 aa5.78□□□□□ -1.48
PTPN4-210ENST00000485247 HELZP42694 1942 aaKnown RBP5.78□□□□□ -1.48
PTPN4-210ENST00000485247 KIAA1549LQ6ZVL6 1849 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 CYP3A7-CYP3A51PA0A087WV96 503 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 MTMR11A4FU01 709 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 GOLGA8AA7E2F4 631 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 GOLGA8BA8MQT2 603 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 E9PAM4 449 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 EDN1P05305 212 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 JUPP14923 745 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 GNSP15586 552 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 CYP3A7P24462 503 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 TPP2P29144 1249 aaPredicted RBP5.77□□□□□ -1.49
PTPN4-210ENST00000485247 ADSSP30520 456 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 OPRD1P41143 372 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 IFNAR2P48551 515 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 CLDN6P56747 220 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 OSTNP61366 133 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 MRPS21P82921 87 aaKnown RBP5.77□□□□□ -1.49
PTPN4-210ENST00000485247 RHDQ02161 417 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 YWHAHQ04917 246 aaPredicted RBP5.77□□□□□ -1.49
PTPN4-210ENST00000485247 MYO1EQ12965 1108 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 GPR17Q13304 367 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 PPP2R5CQ13362 524 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 MTF1Q14872 753 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 VEPH1Q14D04 833 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 TAF12Q16514 161 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 FAM187BQ17R55 369 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 PREPLQ4J6C6 727 aaPredicted RBP5.77□□□□□ -1.49
PTPN4-210ENST00000485247 EMC10Q5UCC4 262 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 DIEXFQ68CQ4 756 aaKnown RBP5.77□□□□□ -1.49
PTPN4-210ENST00000485247 PPP4R3AQ6IN85 833 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 SLC36A4Q6YBV0 504 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 SFTPA1Q8IWL2 248 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 ZBTB8OSQ8IWT0 167 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 TPH2Q8IWU9 490 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 EFCAB13Q8IY85 973 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 IL17RCQ8NAC3 791 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 RUFY2Q8WXA3 655 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 ATP2A3Q93084 1043 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 C18orf25Q96B23 403 aaPredicted RBP5.77□□□□□ -1.49
PTPN4-210ENST00000485247 WBP1Q96G27 269 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 LIN37Q96GY3 246 aaPredicted RBP5.77□□□□□ -1.49
PTPN4-210ENST00000485247 KREMEN1Q96MU8 473 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 ZMAT2Q96NC0 199 aaKnown RBP5.77□□□□□ -1.49
PTPN4-210ENST00000485247 PI4K2AQ9BTU6 479 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 LINC00597Q9H2U6 94 aa5.77□□□□□ -1.49
PTPN4-210ENST00000485247 FAM124BQ9H5Z6 455 aaPredicted RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms