RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 FAM204AQ9H8W3 233 aa21.78■■□□□ 1.08
SEC13-217ENST00000482647 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.78■■□□□ 1.08
SEC13-217ENST00000482647 ADAM22Q9P0K1 906 aa21.78■■□□□ 1.08
SEC13-217ENST00000482647 MARK1Q9P0L2 795 aa21.78■■□□□ 1.08
SEC13-217ENST00000482647 HCN4Q9Y3Q4 1203 aa21.78■■□□□ 1.08
SEC13-217ENST00000482647 BZW2Q9Y6E2 419 aaKnown RBP21.78■■□□□ 1.08
SEC13-217ENST00000482647 COL4A2P08572 1712 aa21.77■■□□□ 1.08
SEC13-217ENST00000482647 KIF26AQ9ULI4 1882 aaPredicted RBP21.77■■□□□ 1.08
SEC13-217ENST00000482647 COL4A3Q01955 1670 aa21.77■■□□□ 1.08
SEC13-217ENST00000482647 GOLGA8SH3BPF8 625 aa21.77■■□□□ 1.08
SEC13-217ENST00000482647 GYPCP04921 128 aa21.77■■□□□ 1.08
SEC13-217ENST00000482647 NOS2P35228 1153 aa21.77■■□□□ 1.08
SEC13-217ENST00000482647 EIF2DP41214 584 aaKnown RBP21.77■■□□□ 1.08
SEC13-217ENST00000482647 MATKP42679 507 aa21.77■■□□□ 1.08
SEC13-217ENST00000482647 GAB4Q2WGN9 574 aa21.77■■□□□ 1.08
SEC13-217ENST00000482647 SARM1Q6SZW1 724 aa21.77■■□□□ 1.08
SEC13-217ENST00000482647 TPGS1Q6ZTW0 290 aa21.77■■□□□ 1.08
SEC13-217ENST00000482647 SYNPOQ8N3V7 929 aa21.77■■□□□ 1.08
SEC13-217ENST00000482647 DTWD2Q8NBA8 298 aa21.77■■□□□ 1.08
SEC13-217ENST00000482647 AZIN2Q96A70 460 aa21.77■■□□□ 1.08
SEC13-217ENST00000482647 C11orf70Q9BRQ4 267 aa21.77■■□□□ 1.08
SEC13-217ENST00000482647 SYT11Q9BT88 431 aa21.77■■□□□ 1.08
SEC13-217ENST00000482647 BBS2Q9BXC9 721 aa21.77■■□□□ 1.08
SEC13-217ENST00000482647 RRN3Q9NYV6 651 aa21.77■■□□□ 1.08
SEC13-217ENST00000482647 STOML2Q9UJZ1 356 aa21.77■■□□□ 1.08
SEC13-217ENST00000482647 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.76■■□□□ 1.07
SEC13-217ENST00000482647 IGLV3-25P01717 112 aa21.76■■□□□ 1.07
SEC13-217ENST00000482647 CALB1P05937 261 aa21.76■■□□□ 1.07
SEC13-217ENST00000482647 OPRD1P41143 372 aa21.76■■□□□ 1.07
SEC13-217ENST00000482647 SLC6A11P48066 632 aa21.76■■□□□ 1.07
SEC13-217ENST00000482647 CCINQ13939 588 aa21.76■■□□□ 1.07
SEC13-217ENST00000482647 TRIM14Q14142 442 aa21.76■■□□□ 1.07
SEC13-217ENST00000482647 ADGRF1Q5T601 910 aa21.76■■□□□ 1.07
SEC13-217ENST00000482647 E4F1Q66K89 784 aaPredicted RBP21.76■■□□□ 1.07
SEC13-217ENST00000482647 ACAD10Q6JQN1 1059 aa21.76■■□□□ 1.07
SEC13-217ENST00000482647 FSTL4Q6MZW2 842 aa21.76■■□□□ 1.07
SEC13-217ENST00000482647 ARCQ7LC44 396 aa21.76■■□□□ 1.07
SEC13-217ENST00000482647 ZNF571Q7Z3V5 609 aaPredicted RBP21.76■■□□□ 1.07
SEC13-217ENST00000482647 VSTM4Q8IW00 320 aa21.76■■□□□ 1.07
SEC13-217ENST00000482647 CPXM2Q8N436 756 aa21.76■■□□□ 1.07
SEC13-217ENST00000482647 SLC39A13Q96H72 371 aa21.76■■□□□ 1.07
SEC13-217ENST00000482647 FCRL2Q96LA5 508 aaPredicted RBP21.76■■□□□ 1.07
SEC13-217ENST00000482647 XPO6Q96QU8 1125 aaKnown RBP21.76■■□□□ 1.07
SEC13-217ENST00000482647 TRIM5Q9C035 493 aa21.76■■□□□ 1.07
SEC13-217ENST00000482647 KCNH6Q9H252 994 aa21.76■■□□□ 1.07
SEC13-217ENST00000482647 FBRSL1Q9HCM7 1045 aaKnown RBP21.76■■□□□ 1.07
SEC13-217ENST00000482647 DDIT4Q9NX09 232 aa21.76■■□□□ 1.07
SEC13-217ENST00000482647 STAP1Q9ULZ2 295 aa21.76■■□□□ 1.07
SEC13-217ENST00000482647 NEDD8-MDP1E9PL57 170 aa21.75■■□□□ 1.07
SEC13-217ENST00000482647 IRAK2O43187 625 aa21.75■■□□□ 1.07
SEC13-217ENST00000482647 CYBBP04839 570 aa21.75■■□□□ 1.07
SEC13-217ENST00000482647 SLC2A3P11169 496 aa21.75■■□□□ 1.07
SEC13-217ENST00000482647 SKILP12757 684 aa21.75■■□□□ 1.07
SEC13-217ENST00000482647 TYRP14679 529 aa21.75■■□□□ 1.07
SEC13-217ENST00000482647 CASP14P31944 242 aa21.75■■□□□ 1.07
SEC13-217ENST00000482647 C1QBPQ07021 282 aaKnown RBP21.75■■□□□ 1.07
SEC13-217ENST00000482647 PTP4A2Q12974 167 aa21.75■■□□□ 1.07
SEC13-217ENST00000482647 PREPLQ4J6C6 727 aaPredicted RBP21.75■■□□□ 1.07
SEC13-217ENST00000482647 NAIF1Q69YI7 327 aaPredicted RBP21.75■■□□□ 1.07
SEC13-217ENST00000482647 FAM217AQ8IXS0 508 aa21.75■■□□□ 1.07
SEC13-217ENST00000482647 NAT16Q8N8M0 369 aa21.75■■□□□ 1.07
SEC13-217ENST00000482647 PNKPQ96T60 521 aa21.75■■□□□ 1.07
SEC13-217ENST00000482647 DDX50Q9BQ39 737 aaKnown RBP21.75■■□□□ 1.07
SEC13-217ENST00000482647 IER2Q9BTL4 223 aa21.75■■□□□ 1.07
SEC13-217ENST00000482647 TMEM51Q9NW97 253 aa21.75■■□□□ 1.07
SEC13-217ENST00000482647 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.75■■□□□ 1.07
SEC13-217ENST00000482647 DEC1Q9P2X7 70 aa21.75■■□□□ 1.07
SEC13-217ENST00000482647 TMEM59LQ9UK28 342 aa21.75■■□□□ 1.07
SEC13-217ENST00000482647 WDFY4Q6ZS81 3184 aa21.74■■□□□ 1.07
SEC13-217ENST00000482647 M0QYT0 321 aa21.74■■□□□ 1.07
SEC13-217ENST00000482647 GALR2O43603 387 aaPredicted RBP21.74■■□□□ 1.07
SEC13-217ENST00000482647 APOEP02649 317 aa21.74■■□□□ 1.07
SEC13-217ENST00000482647 SERPING1P05155 500 aa21.74■■□□□ 1.07
SEC13-217ENST00000482647 TPM1P09493 284 aa21.74■■□□□ 1.07
SEC13-217ENST00000482647 PITX1P78337 314 aaPredicted RBP21.74■■□□□ 1.07
SEC13-217ENST00000482647 EIF4EBP2Q13542 120 aaPredicted RBP21.74■■□□□ 1.07
SEC13-217ENST00000482647 FBXO43Q4G163 708 aa21.74■■□□□ 1.07
SEC13-217ENST00000482647 ZC3H12AQ5D1E8 599 aaKnown RBP21.74■■□□□ 1.07
SEC13-217ENST00000482647 PHLDB2Q86SQ0 1253 aa21.74■■□□□ 1.07
SEC13-217ENST00000482647 ETFBKMTQ8IXQ9 262 aa21.74■■□□□ 1.07
SEC13-217ENST00000482647 CCDC26Q8TAB7 109 aa21.74■■□□□ 1.07
SEC13-217ENST00000482647 RNF34Q969K3 372 aa21.74■■□□□ 1.07
SEC13-217ENST00000482647 CHRDQ9H2X0 955 aa21.74■■□□□ 1.07
SEC13-217ENST00000482647 RBM12Q9NTZ6 932 aaKnown RBP21.74■■□□□ 1.07
SEC13-217ENST00000482647 SPATA6Q9NWH7 488 aaPredicted RBP21.74■■□□□ 1.07
SEC13-217ENST00000482647 SLC12A6Q9UHW9 1150 aa21.74■■□□□ 1.07
SEC13-217ENST00000482647 SYNJ2BP-COX16A0A087WUM0 186 aa21.73■■□□□ 1.07
SEC13-217ENST00000482647 ACSL4O60488 711 aa21.73■■□□□ 1.07
SEC13-217ENST00000482647 TULP3O75386 442 aa21.73■■□□□ 1.07
SEC13-217ENST00000482647 F9P00740 461 aa21.73■■□□□ 1.07
SEC13-217ENST00000482647 EGFP01133 1207 aa21.73■■□□□ 1.07
SEC13-217ENST00000482647 GZMAP12544 262 aa21.73■■□□□ 1.07
SEC13-217ENST00000482647 COL9A1P20849 921 aa21.73■■□□□ 1.07
SEC13-217ENST00000482647 CCR1P32246 355 aa21.73■■□□□ 1.07
SEC13-217ENST00000482647 GSCP56915 257 aaPredicted RBP21.73■■□□□ 1.07
SEC13-217ENST00000482647 NME3Q13232 169 aa21.73■■□□□ 1.07
SEC13-217ENST00000482647 SLC25A52Q3SY17 297 aa21.73■■□□□ 1.07
SEC13-217ENST00000482647 MPPE1Q53F39 396 aa21.73■■□□□ 1.07
SEC13-217ENST00000482647 MON1BQ7L1V2 547 aa21.73■■□□□ 1.07
SEC13-217ENST00000482647 VPS36Q86VN1 386 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms