RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 PPM1KQ8N3J5 372 aa10.17□□□□□ -0.78
TMEM39A-207ENST00000482162 FRMD1Q8N878 549 aa10.17□□□□□ -0.78
TMEM39A-207ENST00000482162 AZIN2Q96A70 460 aa10.17□□□□□ -0.78
TMEM39A-207ENST00000482162 TPSD1Q9BZJ3 242 aa10.17□□□□□ -0.78
TMEM39A-207ENST00000482162 ZDHHC4Q9NPG8 344 aa10.17□□□□□ -0.78
TMEM39A-207ENST00000482162 ABCC13Q9NSE7 274 aa10.17□□□□□ -0.78
TMEM39A-207ENST00000482162 CHMP5Q9NZZ3 219 aa10.17□□□□□ -0.78
TMEM39A-207ENST00000482162 RWDD2AQ9UIY3 292 aa10.17□□□□□ -0.78
TMEM39A-207ENST00000482162 RASAL2Q9UJF2 1139 aa10.17□□□□□ -0.78
TMEM39A-207ENST00000482162 STRIP2Q9ULQ0 834 aa10.17□□□□□ -0.78
TMEM39A-207ENST00000482162 CLEC4EQ9ULY5 219 aa10.17□□□□□ -0.78
TMEM39A-207ENST00000482162 CTNND2Q9UQB3 1225 aa10.17□□□□□ -0.78
TMEM39A-207ENST00000482162 PCDHB4Q9Y5E5 795 aa10.17□□□□□ -0.78
TMEM39A-207ENST00000482162 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.17□□□□□ -0.78
TMEM39A-207ENST00000482162 NUP205Q92621 2012 aa10.16□□□□□ -0.78
TMEM39A-207ENST00000482162 THADAQ6YHU6 1953 aa10.16□□□□□ -0.78
TMEM39A-207ENST00000482162 SLC12A8A0AV02 714 aa10.16□□□□□ -0.78
TMEM39A-207ENST00000482162 TIMM44O43615 452 aa10.16□□□□□ -0.78
TMEM39A-207ENST00000482162 FGFR1OPO95684 399 aaKnown RBP10.16□□□□□ -0.78
TMEM39A-207ENST00000482162 AFPP02771 609 aaKnown RBP10.16□□□□□ -0.78
TMEM39A-207ENST00000482162 GPD2P43304 727 aa10.16□□□□□ -0.78
TMEM39A-207ENST00000482162 STX17P56962 302 aa10.16□□□□□ -0.78
TMEM39A-207ENST00000482162 ZNF445P59923 1031 aa10.16□□□□□ -0.78
TMEM39A-207ENST00000482162 GEN1Q17RS7 908 aa10.16□□□□□ -0.78
TMEM39A-207ENST00000482162 ADGRF1Q5T601 910 aa10.16□□□□□ -0.78
TMEM39A-207ENST00000482162 STPG1Q5TH74 334 aa10.16□□□□□ -0.78
TMEM39A-207ENST00000482162 TMEM215Q68D42 235 aa10.16□□□□□ -0.78
TMEM39A-207ENST00000482162 KIAA1211LQ6NV74 962 aa10.16□□□□□ -0.78
TMEM39A-207ENST00000482162 CLEC17AQ6ZS10 378 aa10.16□□□□□ -0.78
TMEM39A-207ENST00000482162 RRAGAQ7L523 313 aa10.16□□□□□ -0.78
TMEM39A-207ENST00000482162 C12orf50Q8NA57 414 aaPredicted RBP10.16□□□□□ -0.78
TMEM39A-207ENST00000482162 IPO4Q8TEX9 1081 aaKnown RBP10.16□□□□□ -0.78
TMEM39A-207ENST00000482162 RLN3Q8WXF3 142 aa10.16□□□□□ -0.78
TMEM39A-207ENST00000482162 DDX1Q92499 740 aaKnown RBP10.16□□□□□ -0.78
TMEM39A-207ENST00000482162 LSM14BQ9BX40 385 aaKnown RBP10.16□□□□□ -0.78
TMEM39A-207ENST00000482162 SLC4A5Q9BY07 1137 aa10.16□□□□□ -0.78
TMEM39A-207ENST00000482162 INTS2Q9H0H0 1204 aaKnown RBP10.16□□□□□ -0.78
TMEM39A-207ENST00000482162 PLK2Q9NYY3 685 aa10.16□□□□□ -0.78
TMEM39A-207ENST00000482162 THAP10Q9P2Z0 257 aaPredicted RBP10.16□□□□□ -0.78
TMEM39A-207ENST00000482162 EVLQ9UI08 416 aaPredicted RBP10.16□□□□□ -0.78
TMEM39A-207ENST00000482162 PI4KAP42356 2102 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 TCRBV21S2A2A0A5A6 115 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 LNP1A1A4G5 178 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 GTPBP10A4D1E9 387 aaKnown RBP10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 CDX4O14627 284 aaPredicted RBP10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 FBXO21O94952 628 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 ADRB1P08588 477 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 HOXB2P14652 356 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 BRD2P25440 801 aaKnown RBP10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 HOXD9P28356 352 aaPredicted RBP10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 GBP1P32455 592 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 HOXD12P35452 270 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 PTGER3P43115 390 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 CREB5Q02930 508 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 RING1Q06587 406 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 EIF4EBP2Q13542 120 aaPredicted RBP10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 EIF4HQ15056 248 aaKnown RBP10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 MPP7Q5T2T1 576 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 TCEAL6Q6IPX3 200 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 DPY19L2P1Q6NXN4 242 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 RSRC2Q7L4I2 434 aaKnown RBP10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 LPCAT2Q7L5N7 544 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 ENOSF1Q7L5Y1 443 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 TMEM110Q86TL2 294 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 FMNL3Q8IVF7 1028 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 CHPFQ8IZ52 775 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 SIX6OS1Q8N1H7 587 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 MLKLQ8NB16 471 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 RNF139Q8WU17 664 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 HMGB4Q8WW32 186 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 EDEM1Q92611 657 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 TCEAL3Q969E4 200 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 LMLNQ96KR4 655 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 MRGPRX1Q96LB2 322 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 SMOC1Q9H4F8 434 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 ELOVL2Q9NXB9 296 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 SFMBT1Q9UHJ3 866 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 PILRBQ9UKJ0 227 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 STON1Q9Y6Q2 735 aa10.15□□□□□ -0.78
TMEM39A-207ENST00000482162 PCNX2A6NKB5 2137 aa10.15□□□□□ -0.79
TMEM39A-207ENST00000482162 IGHV1OR15-9A0A0B4J2B8 117 aa10.14□□□□□ -0.79
TMEM39A-207ENST00000482162 BECN2A8MW95 431 aa10.14□□□□□ -0.79
TMEM39A-207ENST00000482162 WASH3PC4AMC7 463 aa10.14□□□□□ -0.79
TMEM39A-207ENST00000482162 KHNYNO15037 678 aaKnown RBP10.14□□□□□ -0.79
TMEM39A-207ENST00000482162 ABCB7O75027 752 aa10.14□□□□□ -0.79
TMEM39A-207ENST00000482162 ZNF217O75362 1048 aa10.14□□□□□ -0.79
TMEM39A-207ENST00000482162 CALCAP01258 141 aa10.14□□□□□ -0.79
TMEM39A-207ENST00000482162 IGLV3-19P01714 112 aa10.14□□□□□ -0.79
TMEM39A-207ENST00000482162 LTFP02788 710 aa10.14□□□□□ -0.79
TMEM39A-207ENST00000482162 HMBSP08397 361 aa10.14□□□□□ -0.79
TMEM39A-207ENST00000482162 NDUFV2P19404 249 aa10.14□□□□□ -0.79
TMEM39A-207ENST00000482162 WASP42768 502 aa10.14□□□□□ -0.79
TMEM39A-207ENST00000482162 HARS2P49590 506 aaKnown RBP10.14□□□□□ -0.79
TMEM39A-207ENST00000482162 RGS7P49802 495 aa10.14□□□□□ -0.79
TMEM39A-207ENST00000482162 IRX4P78413 519 aa10.14□□□□□ -0.79
TMEM39A-207ENST00000482162 NNTQ13423 1086 aa10.14□□□□□ -0.79
TMEM39A-207ENST00000482162 E2F5Q15329 346 aa10.14□□□□□ -0.79
TMEM39A-207ENST00000482162 AASDHQ4L235 1098 aaPredicted RBP10.14□□□□□ -0.79
TMEM39A-207ENST00000482162 MPPE1Q53F39 396 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms