RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 KCND3Q9UK17 655 aa5.92□□□□□ -1.46
UPF3A-207ENST00000481131 ZBTB1Q9Y2K1 713 aa5.92□□□□□ -1.46
UPF3A-207ENST00000481131 EPN1Q9Y6I3 576 aaPredicted RBP5.92□□□□□ -1.46
UPF3A-207ENST00000481131 COL4A3Q01955 1670 aa5.91□□□□□ -1.46
UPF3A-207ENST00000481131 FAM90A20PA6NIJ5 464 aa5.91□□□□□ -1.46
UPF3A-207ENST00000481131 SLC38A8A6NNN8 435 aa5.91□□□□□ -1.46
UPF3A-207ENST00000481131 E7EVH7 732 aa5.91□□□□□ -1.46
UPF3A-207ENST00000481131 NARSO43776 548 aaKnown RBP5.91□□□□□ -1.46
UPF3A-207ENST00000481131 WDHD1O75717 1129 aaPredicted RBP5.91□□□□□ -1.46
UPF3A-207ENST00000481131 POLBP06746 335 aa5.91□□□□□ -1.46
UPF3A-207ENST00000481131 HKR1P10072 659 aa5.91□□□□□ -1.46
UPF3A-207ENST00000481131 CD53P19397 219 aa5.91□□□□□ -1.46
UPF3A-207ENST00000481131 TNFRSF1AP19438 455 aa5.91□□□□□ -1.46
UPF3A-207ENST00000481131 ADRA1DP25100 572 aa5.91□□□□□ -1.46
UPF3A-207ENST00000481131 ADRA1BP35368 520 aa5.91□□□□□ -1.46
UPF3A-207ENST00000481131 DGKQP52824 942 aa5.91□□□□□ -1.46
UPF3A-207ENST00000481131 ACTR2P61160 394 aa5.91□□□□□ -1.46
UPF3A-207ENST00000481131 SEMA3BQ13214 749 aa5.91□□□□□ -1.46
UPF3A-207ENST00000481131 DNASE1L3Q13609 305 aa5.91□□□□□ -1.46
UPF3A-207ENST00000481131 PTPAQ15257 358 aa5.91□□□□□ -1.46
UPF3A-207ENST00000481131 KAZNQ674X7 775 aa5.91□□□□□ -1.46
UPF3A-207ENST00000481131 C16orf89Q6UX73 402 aa5.91□□□□□ -1.46
UPF3A-207ENST00000481131 ZNF551Q7Z340 670 aaPredicted RBP5.91□□□□□ -1.46
UPF3A-207ENST00000481131 TMTC1Q8IUR5 882 aa5.91□□□□□ -1.46
UPF3A-207ENST00000481131 LCORLQ8N3X6 602 aa5.91□□□□□ -1.46
UPF3A-207ENST00000481131 RP9Q8TA86 221 aaKnown RBP5.91□□□□□ -1.46
UPF3A-207ENST00000481131 HMGB4Q8WW32 186 aa5.91□□□□□ -1.46
UPF3A-207ENST00000481131 OVCA2Q8WZ82 227 aa5.91□□□□□ -1.46
UPF3A-207ENST00000481131 SDCCAG3Q96C92 435 aa5.91□□□□□ -1.46
UPF3A-207ENST00000481131 THAP7Q9BT49 309 aaPredicted RBP5.91□□□□□ -1.46
UPF3A-207ENST00000481131 DUSP22Q9NRW4 184 aa5.91□□□□□ -1.46
UPF3A-207ENST00000481131 ZNF69Q9UC07 566 aa5.91□□□□□ -1.46
UPF3A-207ENST00000481131 NFU1Q9UMS0 254 aa5.91□□□□□ -1.46
UPF3A-207ENST00000481131 PCDHB2Q9Y5E7 798 aa5.91□□□□□ -1.46
UPF3A-207ENST00000481131 KIAA0556O60303 1618 aa5.91□□□□□ -1.46
UPF3A-207ENST00000481131 PRG4Q92954 1404 aaPredicted RBP5.91□□□□□ -1.46
UPF3A-207ENST00000481131 CCDC187A0A096LP49 1063 aa5.9□□□□□ -1.46
UPF3A-207ENST00000481131 LINC00473A8K010 186 aa5.9□□□□□ -1.46
UPF3A-207ENST00000481131 EFCAB8A8MWE9 144 aa5.9□□□□□ -1.46
UPF3A-207ENST00000481131 H0YIZ8 118 aa5.9□□□□□ -1.46
UPF3A-207ENST00000481131 KRT38O76015 456 aa5.9□□□□□ -1.46
UPF3A-207ENST00000481131 URI1O94763 535 aaPredicted RBP5.9□□□□□ -1.46
UPF3A-207ENST00000481131 MBPP02686 304 aaPredicted RBP5.9□□□□□ -1.46
UPF3A-207ENST00000481131 PEPDP12955 493 aa5.9□□□□□ -1.46
UPF3A-207ENST00000481131 ENGP17813 658 aa5.9□□□□□ -1.46
UPF3A-207ENST00000481131 FPR3P25089 353 aa5.9□□□□□ -1.46
UPF3A-207ENST00000481131 SERPINA4P29622 427 aa5.9□□□□□ -1.46
UPF3A-207ENST00000481131 CYP2C18P33260 490 aa5.9□□□□□ -1.46
UPF3A-207ENST00000481131 THBS4P35443 961 aa5.9□□□□□ -1.46
UPF3A-207ENST00000481131 AARSP49588 968 aaKnown RBP eCLIP5.9□□□□□ -1.46
UPF3A-207ENST00000481131 DIO1P49895 249 aa5.9□□□□□ -1.46
UPF3A-207ENST00000481131 RPS6KA2Q15349 733 aa5.9□□□□□ -1.46
UPF3A-207ENST00000481131 SMAD1Q15797 465 aaKnown RBP5.9□□□□□ -1.46
UPF3A-207ENST00000481131 AAK1Q2M2I8 961 aa5.9□□□□□ -1.46
UPF3A-207ENST00000481131 ANKRD45Q5TZF3 282 aa5.9□□□□□ -1.46
UPF3A-207ENST00000481131 Q6ZPA2 131 aa5.9□□□□□ -1.46
UPF3A-207ENST00000481131 PTCHD4Q6ZW05 846 aa5.9□□□□□ -1.46
UPF3A-207ENST00000481131 PARS2Q7L3T8 475 aaKnown RBP5.9□□□□□ -1.46
UPF3A-207ENST00000481131 SYT13Q7L8C5 426 aa5.9□□□□□ -1.46
UPF3A-207ENST00000481131 ANKS1BQ7Z6G8 1248 aa5.9□□□□□ -1.46
UPF3A-207ENST00000481131 P3H2Q8IVL5 708 aa5.9□□□□□ -1.46
UPF3A-207ENST00000481131 SIRT6Q8N6T7 355 aa5.9□□□□□ -1.46
UPF3A-207ENST00000481131 PAF1Q8N7H5 531 aa5.9□□□□□ -1.46
UPF3A-207ENST00000481131 BEND2Q8NDZ0 799 aa5.9□□□□□ -1.46
UPF3A-207ENST00000481131 COQ10AQ96MF6 247 aa5.9□□□□□ -1.46
UPF3A-207ENST00000481131 COG8Q96MW5 612 aa5.9□□□□□ -1.46
UPF3A-207ENST00000481131 ZNF747Q9BV97 191 aa5.9□□□□□ -1.46
UPF3A-207ENST00000481131 FSD1LQ9BXM9 530 aa5.9□□□□□ -1.46
UPF3A-207ENST00000481131 CCDC134Q9H6E4 229 aa5.9□□□□□ -1.46
UPF3A-207ENST00000481131 NDUFAF4Q9P032 175 aa5.9□□□□□ -1.46
UPF3A-207ENST00000481131 AMFRQ9UKV5 643 aa5.9□□□□□ -1.46
UPF3A-207ENST00000481131 CRYL1Q9Y2S2 319 aa5.9□□□□□ -1.46
UPF3A-207ENST00000481131 DISP1Q96F81 1524 aa5.89□□□□□ -1.47
UPF3A-207ENST00000481131 UGGT2Q9NYU1 1516 aa5.89□□□□□ -1.47
UPF3A-207ENST00000481131 CES2O00748 559 aa5.89□□□□□ -1.47
UPF3A-207ENST00000481131 PRAMEF2O60811 474 aa5.89□□□□□ -1.47
UPF3A-207ENST00000481131 HEXIM1O94992 359 aaKnown RBP5.89□□□□□ -1.47
UPF3A-207ENST00000481131 LARGE1O95461 756 aa5.89□□□□□ -1.47
UPF3A-207ENST00000481131 ESRRBO95718 433 aa5.89□□□□□ -1.47
UPF3A-207ENST00000481131 RXRAP19793 462 aa5.89□□□□□ -1.47
UPF3A-207ENST00000481131 GRIA3P42263 894 aa5.89□□□□□ -1.47
UPF3A-207ENST00000481131 PAPOLAP51003 745 aaKnown RBP5.89□□□□□ -1.47
UPF3A-207ENST00000481131 CCR5P51681 352 aa5.89□□□□□ -1.47
UPF3A-207ENST00000481131 SUMO2P61956 95 aaKnown RBP5.89□□□□□ -1.47
UPF3A-207ENST00000481131 MRPS35P82673 323 aaKnown RBP5.89□□□□□ -1.47
UPF3A-207ENST00000481131 MPP3Q13368 585 aa5.89□□□□□ -1.47
UPF3A-207ENST00000481131 FAM187BQ17R55 369 aa5.89□□□□□ -1.47
UPF3A-207ENST00000481131 JAKMIP3Q5VZ66 844 aa5.89□□□□□ -1.47
UPF3A-207ENST00000481131 DGAT2L7PQ6IED9 249 aa5.89□□□□□ -1.47
UPF3A-207ENST00000481131 KRT27Q7Z3Y8 459 aa5.89□□□□□ -1.47
UPF3A-207ENST00000481131 CPT1BQ92523 772 aa5.89□□□□□ -1.47
UPF3A-207ENST00000481131 GOLGA1Q92805 767 aa5.89□□□□□ -1.47
UPF3A-207ENST00000481131 VPS50Q96JG6 964 aa5.89□□□□□ -1.47
UPF3A-207ENST00000481131 TWNKQ96RR1 684 aa5.89□□□□□ -1.47
UPF3A-207ENST00000481131 EIF3CQ99613 913 aaKnown RBP5.89□□□□□ -1.47
UPF3A-207ENST00000481131 CHODLQ9H9P2 273 aa5.89□□□□□ -1.47
UPF3A-207ENST00000481131 FBXO28Q9NVF7 368 aa5.89□□□□□ -1.47
UPF3A-207ENST00000481131 FOXJ2Q9P0K8 574 aa5.89□□□□□ -1.47
UPF3A-207ENST00000481131 IFT80Q9P2H3 777 aaPredicted RBP5.89□□□□□ -1.47
UPF3A-207ENST00000481131 MGAT4CQ9UBM8 478 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms