RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 DNAAF2Q9NVR5 837 aaKnown RBP13.89□□□□□ -0.19
VCL-205ENST00000478896 MARCH2Q9P0N8 246 aa13.89□□□□□ -0.19
VCL-205ENST00000478896 THAP10Q9P2Z0 257 aaPredicted RBP13.89□□□□□ -0.19
VCL-205ENST00000478896 FBXO10Q9UK96 956 aa13.89□□□□□ -0.19
VCL-205ENST00000478896 KLK13Q9UKR3 277 aa13.89□□□□□ -0.19
VCL-205ENST00000478896 AGO1Q9UL18 857 aaKnown RBP13.89□□□□□ -0.19
VCL-205ENST00000478896 SLC27A6Q9Y2P4 619 aa13.89□□□□□ -0.19
VCL-205ENST00000478896 NEUROG3Q9Y4Z2 214 aa13.89□□□□□ -0.19
VCL-205ENST00000478896 PCDHB9Q9Y5E1 797 aa13.89□□□□□ -0.19
VCL-205ENST00000478896 LAMA1P25391 3075 aa13.88□□□□□ -0.19
VCL-205ENST00000478896 H0Y626 953 aa13.88□□□□□ -0.19
VCL-205ENST00000478896 STX10O60499 249 aa13.88□□□□□ -0.19
VCL-205ENST00000478896 TRIM16O95361 564 aa13.88□□□□□ -0.19
VCL-205ENST00000478896 ACADMP11310 421 aa13.88□□□□□ -0.19
VCL-205ENST00000478896 NCAM1P13591 858 aa13.88□□□□□ -0.19
VCL-205ENST00000478896 ZNF132P52740 706 aa13.88□□□□□ -0.19
VCL-205ENST00000478896 HNRNPDQ14103 355 aaKnown RBP13.88□□□□□ -0.19
VCL-205ENST00000478896 DCAF17Q5H9S7 520 aaPredicted RBP13.88□□□□□ -0.19
VCL-205ENST00000478896 TCERG1LQ5VWI1 586 aa13.88□□□□□ -0.19
VCL-205ENST00000478896 KRBA2Q6ZNG9 492 aa13.88□□□□□ -0.19
VCL-205ENST00000478896 PRCCQ92733 491 aaPredicted RBP13.88□□□□□ -0.19
VCL-205ENST00000478896 PLD4Q96BZ4 506 aa13.88□□□□□ -0.19
VCL-205ENST00000478896 SIPA1Q96FS4 1042 aa13.88□□□□□ -0.19
VCL-205ENST00000478896 EEF2KMTQ96G04 330 aa13.88□□□□□ -0.19
VCL-205ENST00000478896 ARID3AQ99856 593 aa13.88□□□□□ -0.19
VCL-205ENST00000478896 GPR174Q9BXC1 333 aa13.88□□□□□ -0.19
VCL-205ENST00000478896 MKRN2Q9H000 416 aaKnown RBP13.88□□□□□ -0.19
VCL-205ENST00000478896 RAB20Q9NX57 234 aa13.88□□□□□ -0.19
VCL-205ENST00000478896 MSRB2Q9Y3D2 182 aa13.88□□□□□ -0.19
VCL-205ENST00000478896 PCNX2A6NKB5 2137 aa13.88□□□□□ -0.19
VCL-205ENST00000478896 CHD8Q9HCK8 2581 aa13.87□□□□□ -0.19
VCL-205ENST00000478896 CKAP5Q14008 2032 aa13.87□□□□□ -0.19
VCL-205ENST00000478896 TKTL1P51854 596 aa13.87□□□□□ -0.19
VCL-205ENST00000478896 RAD23BP54727 409 aa13.87□□□□□ -0.19
VCL-205ENST00000478896 GRIK2Q13002 908 aa13.87□□□□□ -0.19
VCL-205ENST00000478896 SLC14A1Q13336 389 aa13.87□□□□□ -0.19
VCL-205ENST00000478896 ZNF234Q14588 700 aa13.87□□□□□ -0.19
VCL-205ENST00000478896 EIF4HQ15056 248 aaKnown RBP13.87□□□□□ -0.19
VCL-205ENST00000478896 ZNF423Q2M1K9 1284 aa13.87□□□□□ -0.19
VCL-205ENST00000478896 GOLGA7BQ2TAP0 167 aa13.87□□□□□ -0.19
VCL-205ENST00000478896 EDRF1Q3B7T1 1238 aa13.87□□□□□ -0.19
VCL-205ENST00000478896 ARHGAP17Q68EM7 881 aa13.87□□□□□ -0.19
VCL-205ENST00000478896 SERPINA13PQ6UXR4 307 aa13.87□□□□□ -0.19
VCL-205ENST00000478896 TMPRSS6Q8IU80 811 aa13.87□□□□□ -0.19
VCL-205ENST00000478896 SMYD4Q8IYR2 804 aaPredicted RBP13.87□□□□□ -0.19
VCL-205ENST00000478896 CPXM2Q8N436 756 aa13.87□□□□□ -0.19
VCL-205ENST00000478896 ZCCHC9Q8N567 271 aaKnown RBP13.87□□□□□ -0.19
VCL-205ENST00000478896 SLC4A11Q8NBS3 891 aa13.87□□□□□ -0.19
VCL-205ENST00000478896 SEMA4DQ92854 862 aa13.87□□□□□ -0.19
VCL-205ENST00000478896 P2RY11Q96G91 374 aa13.87□□□□□ -0.19
VCL-205ENST00000478896 FAXDC2Q96IV6 333 aa13.87□□□□□ -0.19
VCL-205ENST00000478896 LRRC4Q9HBW1 653 aa13.87□□□□□ -0.19
VCL-205ENST00000478896 OLA1Q9NTK5 396 aaKnown RBP13.87□□□□□ -0.19
VCL-205ENST00000478896 WSB2Q9NYS7 404 aaPredicted RBP13.87□□□□□ -0.19
VCL-205ENST00000478896 USP36Q9P275 1121 aaKnown RBP13.87□□□□□ -0.19
VCL-205ENST00000478896 USP24Q9UPU5 2620 aa13.86□□□□□ -0.19
VCL-205ENST00000478896 A0A1B0GTW7 788 aa13.86□□□□□ -0.19
VCL-205ENST00000478896 CETN3O15182 167 aa13.86□□□□□ -0.19
VCL-205ENST00000478896 SH3BP5O60239 455 aa13.86□□□□□ -0.19
VCL-205ENST00000478896 ZBED1O96006 694 aa13.86□□□□□ -0.19
VCL-205ENST00000478896 EPHX1P07099 455 aa13.86□□□□□ -0.19
VCL-205ENST00000478896 CD59P13987 128 aa13.86□□□□□ -0.19
VCL-205ENST00000478896 OXTRP30559 389 aa13.86□□□□□ -0.19
VCL-205ENST00000478896 HARS2P49590 506 aaKnown RBP13.86□□□□□ -0.19
VCL-205ENST00000478896 BCAT1P54687 386 aa13.86□□□□□ -0.19
VCL-205ENST00000478896 FAM193AP78312 1265 aa13.86□□□□□ -0.19
VCL-205ENST00000478896 ZCWPW2Q504Y3 356 aa13.86□□□□□ -0.19
VCL-205ENST00000478896 RAB41Q5JT25 222 aa13.86□□□□□ -0.19
VCL-205ENST00000478896 DCAF12L1Q5VU92 463 aa13.86□□□□□ -0.19
VCL-205ENST00000478896 METTL3Q86U44 580 aaKnown RBP13.86□□□□□ -0.19
VCL-205ENST00000478896 NAXDQ8IW45 347 aa13.86□□□□□ -0.19
VCL-205ENST00000478896 CHCHD4Q8N4Q1 142 aa13.86□□□□□ -0.19
VCL-205ENST00000478896 ANKRD52Q8NB46 1076 aa13.86□□□□□ -0.19
VCL-205ENST00000478896 RNF139Q8WU17 664 aa13.86□□□□□ -0.19
VCL-205ENST00000478896 SORCS1Q8WY21 1168 aa13.86□□□□□ -0.19
VCL-205ENST00000478896 SNX19Q92543 992 aa13.86□□□□□ -0.19
VCL-205ENST00000478896 CAMK1GQ96NX5 476 aa13.86□□□□□ -0.19
VCL-205ENST00000478896 IPO9Q96P70 1041 aaKnown RBP13.86□□□□□ -0.19
VCL-205ENST00000478896 ULBP1Q9BZM6 244 aa13.86□□□□□ -0.19
VCL-205ENST00000478896 UBXN6Q9BZV1 441 aa13.86□□□□□ -0.19
VCL-205ENST00000478896 ZDHHC5Q9C0B5 715 aa13.86□□□□□ -0.19
VCL-205ENST00000478896 ITM2CQ9NQX7 267 aa13.86□□□□□ -0.19
VCL-205ENST00000478896 ELOVL2Q9NXB9 296 aa13.86□□□□□ -0.19
VCL-205ENST00000478896 HESX1Q9UBX0 185 aa13.86□□□□□ -0.19
VCL-205ENST00000478896 TSPAN16Q9UKR8 245 aa13.86□□□□□ -0.19
VCL-205ENST00000478896 ATP6V1DQ9Y5K8 247 aa13.86□□□□□ -0.19
VCL-205ENST00000478896 FAM237AA0A1B0GTK4 181 aa13.85□□□□□ -0.19
VCL-205ENST00000478896 KCNJ18B7U540 433 aa13.85□□□□□ -0.19
VCL-205ENST00000478896 XPO1O14980 1071 aaKnown RBP13.85□□□□□ -0.19
VCL-205ENST00000478896 ZNF202O95125 648 aa13.85□□□□□ -0.19
VCL-205ENST00000478896 CD19P15391 556 aa13.85□□□□□ -0.19
VCL-205ENST00000478896 PRKCHP24723 683 aa13.85□□□□□ -0.19
VCL-205ENST00000478896 TPMTP51580 245 aa13.85□□□□□ -0.19
VCL-205ENST00000478896 YWHAEP62258 255 aaKnown RBP13.85□□□□□ -0.19
VCL-205ENST00000478896 ADIGQ0VDE8 80 aa13.85□□□□□ -0.19
VCL-205ENST00000478896 BST2Q10589 180 aaKnown RBP13.85□□□□□ -0.19
VCL-205ENST00000478896 ENPP2Q13822 863 aa13.85□□□□□ -0.19
VCL-205ENST00000478896 TRIP6Q15654 476 aaKnown RBP13.85□□□□□ -0.19
VCL-205ENST00000478896 MPPE1Q53F39 396 aa13.85□□□□□ -0.19
VCL-205ENST00000478896 SGO2Q562F6 1265 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms