RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 SMARCD2Q92925 531 aa11.96□□□□□ -0.49
CBWD3-206ENST00000478048 WBP2Q969T9 261 aa11.96□□□□□ -0.49
CBWD3-206ENST00000478048 ACSF2Q96CM8 615 aaPredicted RBP11.96□□□□□ -0.49
CBWD3-206ENST00000478048 ZNF830Q96NB3 372 aaPredicted RBP11.96□□□□□ -0.49
CBWD3-206ENST00000478048 LRRC3BQ96PB8 259 aa11.96□□□□□ -0.49
CBWD3-206ENST00000478048 MCEEQ96PE7 176 aa11.96□□□□□ -0.49
CBWD3-206ENST00000478048 EIF3CQ99613 913 aaKnown RBP11.96□□□□□ -0.49
CBWD3-206ENST00000478048 RPP25Q9BUL9 199 aaKnown RBP11.96□□□□□ -0.49
CBWD3-206ENST00000478048 SELENOOQ9BVL4 669 aa11.96□□□□□ -0.49
CBWD3-206ENST00000478048 NACA2Q9H009 215 aa11.96□□□□□ -0.49
CBWD3-206ENST00000478048 TDP1Q9NUW8 608 aa11.96□□□□□ -0.49
CBWD3-206ENST00000478048 CALCOCO1Q9P1Z2 691 aa11.96□□□□□ -0.49
CBWD3-206ENST00000478048 REXO2Q9Y3B8 237 aaKnown RBP11.96□□□□□ -0.49
CBWD3-206ENST00000478048 SOBPA7XYQ1 873 aa11.95□□□□□ -0.5
CBWD3-206ENST00000478048 CYP1A2P05177 515 aa11.95□□□□□ -0.5
CBWD3-206ENST00000478048 MYBL1P10243 752 aa11.95□□□□□ -0.5
CBWD3-206ENST00000478048 PFKLP17858 780 aa11.95□□□□□ -0.5
CBWD3-206ENST00000478048 MATKP42679 507 aa11.95□□□□□ -0.5
CBWD3-206ENST00000478048 MAGEA1P43355 309 aa11.95□□□□□ -0.5
CBWD3-206ENST00000478048 GPC5P78333 572 aa11.95□□□□□ -0.5
CBWD3-206ENST00000478048 SLC7A9P82251 487 aa11.95□□□□□ -0.5
CBWD3-206ENST00000478048 OTUD1Q5VV17 481 aaPredicted RBP11.95□□□□□ -0.5
CBWD3-206ENST00000478048 MSANTD2Q6P1R3 559 aa11.95□□□□□ -0.5
CBWD3-206ENST00000478048 KLHDC10Q6PID8 442 aa11.95□□□□□ -0.5
CBWD3-206ENST00000478048 BEND5Q7L4P6 421 aa11.95□□□□□ -0.5
CBWD3-206ENST00000478048 TAC4Q86UU9 113 aa11.95□□□□□ -0.5
CBWD3-206ENST00000478048 RXFP2Q8WXD0 754 aa11.95□□□□□ -0.5
CBWD3-206ENST00000478048 RSAD2Q8WXG1 361 aa11.95□□□□□ -0.5
CBWD3-206ENST00000478048 CFAP57Q96MR6 1250 aa11.95□□□□□ -0.5
CBWD3-206ENST00000478048 DESI2Q9BSY9 194 aa11.95□□□□□ -0.5
CBWD3-206ENST00000478048 DDX23Q9BUQ8 820 aaKnown RBP11.95□□□□□ -0.5
CBWD3-206ENST00000478048 KLF16Q9BXK1 252 aaPredicted RBP11.95□□□□□ -0.5
CBWD3-206ENST00000478048 PLA2G2FQ9BZM2 168 aa11.95□□□□□ -0.5
CBWD3-206ENST00000478048 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.95□□□□□ -0.5
CBWD3-206ENST00000478048 MARCH2Q9P0N8 246 aa11.95□□□□□ -0.5
CBWD3-206ENST00000478048 LIMD1Q9UGP4 676 aa11.95□□□□□ -0.5
CBWD3-206ENST00000478048 DNMT3LQ9UJW3 386 aa11.95□□□□□ -0.5
CBWD3-206ENST00000478048 ARHGAP26Q9UNA1 814 aa11.95□□□□□ -0.5
CBWD3-206ENST00000478048 NR2E1Q9Y466 385 aa11.95□□□□□ -0.5
CBWD3-206ENST00000478048 PCDHA13Q9Y5I0 950 aa11.95□□□□□ -0.5
CBWD3-206ENST00000478048 ZFP37Q9Y6Q3 630 aaPredicted RBP11.95□□□□□ -0.5
CBWD3-206ENST00000478048 SYNJ2BP-COX16A0A087WUM0 186 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 SLC12A8A0AV02 714 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 C2CD4BA6NLJ0 364 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 LOC730098B7Z3J9 87 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 LEFTY2O00292 366 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 SCAMP3O14828 347 aaKnown RBP11.94□□□□□ -0.5
CBWD3-206ENST00000478048 PTMAP06454 111 aaKnown RBP11.94□□□□□ -0.5
CBWD3-206ENST00000478048 HMBSP08397 361 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 IRF1P10914 325 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 WEE1P30291 646 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 NOS2P35228 1153 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 OGDHQ02218 1023 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 ZP2Q05996 745 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 CCDC173Q0VFZ6 552 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 C15orf59Q2T9L4 293 aaPredicted RBP11.94□□□□□ -0.5
CBWD3-206ENST00000478048 RAB6CQ53S08 254 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 TADA2BQ86TJ2 420 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 ADHFE1Q8IWW8 467 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 CCDC112Q8NEF3 446 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 SH3RF2Q8TEC5 729 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 TRIM11Q96F44 468 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 PPP1R9BQ96SB3 815 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 CDK5RAP1Q96SZ6 601 aaKnown RBP11.94□□□□□ -0.5
CBWD3-206ENST00000478048 NPY6RQ99463 290 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 KXD1Q9BQD3 176 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 RAB6CQ9H0N0 254 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 KCNF1Q9H3M0 494 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 SMOC2Q9H3U7 446 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 TRPV4Q9HBA0 871 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 ZFP14Q9HCL3 533 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 OLA1Q9NTK5 396 aaKnown RBP11.94□□□□□ -0.5
CBWD3-206ENST00000478048 PARVAQ9NVD7 372 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 COX16Q9P0S2 106 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 ZMYM5Q9UJ78 669 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 NUMBLQ9Y6R0 609 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 NCOR1O75376 2440 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 A0A0U1RQJ8 604 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 HEPACAM2A8MVW5 462 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 ANHXE9PGG2 379 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 TRUB2O95900 331 aaKnown RBP11.94□□□□□ -0.5
CBWD3-206ENST00000478048 TMEM253P0C7T8 217 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 PDGFRAP16234 1089 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 ATXN1P54253 815 aaKnown RBP11.94□□□□□ -0.5
CBWD3-206ENST00000478048 HTR4Q13639 388 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 SPA17Q15506 151 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 CCDC14Q49A88 953 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 SH3PXD2AQ5TCZ1 1133 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 DCUN1D2Q6PH85 259 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 VITQ6UXI7 678 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 ARCQ7LC44 396 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.94□□□□□ -0.5
CBWD3-206ENST00000478048 ZDHHC14Q8IZN3 488 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 ATRIPQ8WXE1 791 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 CTNNBL1Q8WYA6 563 aaPredicted RBP11.94□□□□□ -0.5
CBWD3-206ENST00000478048 NT5C3BQ969T7 300 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 BTBD6Q96KE9 485 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 TBCBQ99426 244 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 TRIM62Q9BVG3 475 aa11.94□□□□□ -0.5
CBWD3-206ENST00000478048 NUP85Q9BW27 656 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms