RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 PTPRJQ12913 1337 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 ANK1P16157 1881 aa7.75□□□□□ -1.17
SPTLC1-205ENST00000477888 ANAPC1Q9H1A4 1944 aa7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 MYOFQ9NZM1 2061 aa7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 A0A1W2PNU3 283 aaPredicted RBP7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 A0A1W2PR77 199 aa7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 FAM92AA1XBS5 289 aa7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 C10orf142B7Z368 130 aa7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 WNT9AO14904 365 aa7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 USP12O75317 370 aa7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 TBX18O95935 607 aa7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 PENKP01210 267 aaPredicted RBP7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 EPHX1P07099 455 aa7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 IRF1P10914 325 aa7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 ARRB1P49407 418 aaPredicted RBP7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 ZNF131P52739 623 aa7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 ASIC1P78348 528 aa7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 RBP5P82980 135 aa7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 TFAMQ00059 246 aaKnown RBP7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 IFRD2Q12894 506 aaPredicted RBP7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 SCAMP5Q8TAC9 235 aa7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 UCMAQ8WVF2 138 aa7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 BHMTQ93088 406 aa7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 FBXO32Q969P5 355 aa7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 SKA1Q96BD8 255 aa7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 PIWIL1Q96J94 861 aaKnown RBP7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 SLC6A18Q96N87 628 aa7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 SLC46A1Q96NT5 459 aa7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 LHX5Q9H2C1 402 aa7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 ERVMER34-1Q9H9K5 563 aa7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 SGK2Q9HBY8 427 aa7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.74□□□□□ -1.179e-15■■■■■ 186.3
SPTLC1-205ENST00000477888 PDRG1Q9NUG6 133 aa7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 ELOVL2Q9NXB9 296 aa7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 PAXBP1Q9Y5B6 917 aa7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 NME7Q9Y5B8 376 aa7.74□□□□□ -1.17
SPTLC1-205ENST00000477888 K7ENM7 598 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 TRIM38O00635 465 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 OPA1O60313 960 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 RTN3O95197 1032 aaPredicted RBP7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 ITGB2P05107 769 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 PLA2G4BP0C869 781 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 WARSP23381 471 aaKnown RBP7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 INHBCP55103 352 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 NXPH1P58417 271 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 RPS14P62263 151 aaKnown RBP7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 ZBTB16Q05516 673 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 CLN3Q13286 438 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 ZNF211Q13398 564 aaPredicted RBP7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 KCNJ12Q14500 433 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 MDH1BQ5I0G3 518 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 TTC38Q5R3I4 469 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 HYIQ5T013 277 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 FYB2Q5VWT5 728 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 TMEM215Q68D42 235 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 KIAA0895LQ68EN5 471 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 Q6ZNB5 142 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 HS2ST1Q7LGA3 356 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 SKAP1Q86WV1 359 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 KCTD17Q8N5Z5 321 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 MYCT1Q8N699 235 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 NSUN7Q8NE18 718 aaKnown RBP7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 ZSWIM2Q8NEG5 633 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 CACTINQ8WUQ7 758 aaKnown RBP7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 SORCS1Q8WY21 1168 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 CCDC97Q96F63 343 aaPredicted RBP7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 PRR11Q96HE9 360 aaPredicted RBP7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 KCNK16Q96T55 309 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 REEP2Q9BRK0 252 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 RAB34Q9BZG1 259 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 ZNF518BQ9C0D4 1074 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 IKZF4Q9H2S9 585 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 TMEM245Q9H330 911 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 GDF3Q9NR23 364 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 ITGA11Q9UKX5 1188 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 ODF2LQ9ULJ1 636 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 CLEC4EQ9ULY5 219 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 SRPK3Q9UPE1 567 aa7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 TLN1Q9Y490 2541 aaKnown RBP7.73□□□□□ -1.17
SPTLC1-205ENST00000477888 DOPEY1Q5JWR5 2465 aa7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 CDRT15L2A8MXV6 281 aa7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 TLR4O00206 839 aa7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 TIMM44O43615 452 aa7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 SIGLEC6O43699 453 aa7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 LZTS3O60299 673 aaPredicted RBP7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 TLR5O60602 858 aa7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 CSO75390 466 aaKnown RBP7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 KRT19P08727 400 aa7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 FAM87AP0C7U9 286 aa7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 SFTPCP11686 197 aa7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 PTPN1P18031 435 aaKnown RBP7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 CD38P28907 300 aa7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 GNL1P36915 607 aaPredicted RBP7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 TRAPPC10P48553 1259 aa7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 FOSBP53539 338 aa7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 DSG2Q14126 1118 aa7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 TRIM29Q14134 588 aa7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 EIF4HQ15056 248 aaKnown RBP7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 E2F5Q15329 346 aa7.72□□□□□ -1.17
SPTLC1-205ENST00000477888 HIST2H2BCQ6DN03 193 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms