RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 K7ENM7 598 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 VILLO15195 856 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 SUV39H1O43463 412 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 TSPAN3O60637 253 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 KRT38O76015 456 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 SEMA4FO95754 770 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 EPHX1P07099 455 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 PLCG1P19174 1290 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 CR2P20023 1033 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 SYKP43405 635 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 BCAT1P54687 386 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 TFAMQ00059 246 aaKnown RBP10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 MAPRE1Q15691 268 aaKnown RBP10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 ZRSR1Q15695 479 aaKnown RBP10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 KRT79Q5XKE5 535 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 CCDC81Q6ZN84 652 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 TOP6BLQ8N6T0 577 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 C1orf127Q8N9H9 656 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 PDZD8Q8NEN9 1154 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 FBXO32Q969P5 355 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 PCED1BQ96HM7 432 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 VCPIP1Q96JH7 1222 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 C8orf48Q96LL4 319 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 ANP32EQ9BTT0 268 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 NACA2Q9H009 215 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 BTBD1Q9H0C5 482 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 NUP62CLQ9H1M0 184 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 PLK2Q9NYY3 685 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 MARK1Q9P0L2 795 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 AGO2Q9UKV8 859 aaKnown RBP10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 CDH9Q9ULB4 789 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 LRRK2Q5S007 2527 aa10.25□□□□□ -0.77
SMARCB1-206ENST00000477836 PLXNA2O75051 1894 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 TISP43B9A030 160 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 ANKRD63C9JTQ0 380 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 NPC1O15118 1278 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 USP12O75317 370 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 DXOO77932 396 aaKnown RBP10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 KRT19P08727 400 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 PDGFRBP09619 1106 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 ACO1P21399 889 aaKnown RBP10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 PRKCHP24723 683 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 YWHAQP27348 245 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 EPHA8P29322 1005 aaPredicted RBP10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 UBA7P41226 1012 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 CACNA2D1P54289 1103 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 RACK1P63244 317 aaKnown RBP10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 BNIP3Q12983 259 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 ENPP2Q13822 863 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 IL17AQ16552 155 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 GEN1Q17RS7 908 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 SOWAHAQ2M3V2 549 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 HS2ST1Q7LGA3 356 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 NT5DC4Q86YG4 428 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 FMR1NBQ8N0W7 255 aaPredicted RBP10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 CSGALNACT2Q8N6G5 542 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 LRRC52Q8N7C0 313 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 IGSF22Q8N9C0 903 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 UCMAQ8WVF2 138 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 SKA1Q96BD8 255 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 SLC6A18Q96N87 628 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 MMS19Q96T76 1030 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 ARHGAP9Q9BRR9 750 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 GZF1Q9H116 711 aaPredicted RBP10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 LHX5Q9H2C1 402 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 CLSTN2Q9H4D0 955 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 THSD1Q9NS62 852 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 STARD5Q9NSY2 213 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 GDAP2Q9NXN4 497 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 TMEM63CQ9P1W3 806 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 HPSEQ9Y251 543 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 SSUH2Q9Y2M2 353 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 MYH10P35580 1976 aa10.24□□□□□ -0.77
SMARCB1-206ENST00000477836 YKT6O15498 198 aa10.23□□□□□ -0.77
SMARCB1-206ENST00000477836 IL18RAPO95256 599 aa10.23□□□□□ -0.77
SMARCB1-206ENST00000477836 ACP1P24666 158 aa10.23□□□□□ -0.77
SMARCB1-206ENST00000477836 CCR10P46092 362 aa10.23□□□□□ -0.77
SMARCB1-206ENST00000477836 LSSP48449 732 aa10.23□□□□□ -0.77
SMARCB1-206ENST00000477836 ARRB1P49407 418 aaPredicted RBP10.23□□□□□ -0.77
SMARCB1-206ENST00000477836 E2F1Q01094 437 aa10.23□□□□□ -0.77
SMARCB1-206ENST00000477836 TLE1Q04724 770 aa10.23□□□□□ -0.77
SMARCB1-206ENST00000477836 ZNF234Q14588 700 aa10.23□□□□□ -0.77
SMARCB1-206ENST00000477836 LINC00303Q3SY05 128 aa10.23□□□□□ -0.77
SMARCB1-206ENST00000477836 MDH1BQ5I0G3 518 aa10.23□□□□□ -0.77
SMARCB1-206ENST00000477836 CRELD2Q6UXH1 353 aaPredicted RBP10.23□□□□□ -0.77
SMARCB1-206ENST00000477836 HTR3DQ70Z44 454 aa10.23□□□□□ -0.77
SMARCB1-206ENST00000477836 NUP93Q8N1F7 819 aa10.23□□□□□ -0.77
SMARCB1-206ENST00000477836 SYT2Q8N9I0 419 aaPredicted RBP10.23□□□□□ -0.77
SMARCB1-206ENST00000477836 OR2T3Q8NH03 318 aa10.23□□□□□ -0.77
SMARCB1-206ENST00000477836 MYCBPAPQ8TBZ2 947 aa10.23□□□□□ -0.77
SMARCB1-206ENST00000477836 KBTBD7Q8WVZ9 684 aa10.23□□□□□ -0.77
SMARCB1-206ENST00000477836 OVCA2Q8WZ82 227 aa10.23□□□□□ -0.77
SMARCB1-206ENST00000477836 KCNN1Q92952 543 aa10.23□□□□□ -0.77
SMARCB1-206ENST00000477836 CCDC34Q96HJ3 373 aa10.23□□□□□ -0.77
SMARCB1-206ENST00000477836 FAM84AQ96KN4 292 aa10.23□□□□□ -0.77
SMARCB1-206ENST00000477836 ORAI3Q9BRQ5 295 aa10.23□□□□□ -0.77
SMARCB1-206ENST00000477836 TNMDQ9H2S6 317 aa10.23□□□□□ -0.77
SMARCB1-206ENST00000477836 POLR1BQ9H9Y6 1135 aa10.23□□□□□ -0.77
SMARCB1-206ENST00000477836 ASCL3Q9NQ33 180 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms