RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 CPNE8Q86YQ8 564 aa16.84■□□□□ 0.29
VHL-203ENST00000477538 ARFGAP1Q8N6T3 406 aa16.84■□□□□ 0.29
VHL-203ENST00000477538 RNF34Q969K3 372 aa16.84■□□□□ 0.29
VHL-203ENST00000477538 PLD4Q96BZ4 506 aa16.84■□□□□ 0.29
VHL-203ENST00000477538 ZFRQ96KR1 1074 aaKnown RBP16.84■□□□□ 0.29
VHL-203ENST00000477538 MYADMQ96S97 322 aa16.84■□□□□ 0.29
VHL-203ENST00000477538 NCAPGQ9BPX3 1015 aa16.84■□□□□ 0.29
VHL-203ENST00000477538 SMG9Q9H0W8 520 aaKnown RBP16.84■□□□□ 0.29
VHL-203ENST00000477538 GKN1Q9NS71 199 aa16.84■□□□□ 0.29
VHL-203ENST00000477538 TDP1Q9NUW8 608 aa16.84■□□□□ 0.29
VHL-203ENST00000477538 TMEM51Q9NW97 253 aa16.84■□□□□ 0.29
VHL-203ENST00000477538 ARHGAP26Q9UNA1 814 aa16.84■□□□□ 0.29
VHL-203ENST00000477538 LRCH4O75427 683 aa16.83■□□□□ 0.28
VHL-203ENST00000477538 PRAMEF12O95522 483 aa16.83■□□□□ 0.28
VHL-203ENST00000477538 IGLV3-27P01718 113 aa16.83■□□□□ 0.28
VHL-203ENST00000477538 IRF1P10914 325 aa16.83■□□□□ 0.28
VHL-203ENST00000477538 WEE1P30291 646 aa16.83■□□□□ 0.28
VHL-203ENST00000477538 PCK1P35558 622 aa16.83■□□□□ 0.28
VHL-203ENST00000477538 SLC1A1P43005 524 aa16.83■□□□□ 0.28
VHL-203ENST00000477538 SSR1P43307 286 aaKnown RBP16.83■□□□□ 0.28
VHL-203ENST00000477538 CXCR3P49682 368 aa16.83■□□□□ 0.28
VHL-203ENST00000477538 RING1Q06587 406 aa16.83■□□□□ 0.28
VHL-203ENST00000477538 ZC3H12AQ5D1E8 599 aaKnown RBP16.83■□□□□ 0.28
VHL-203ENST00000477538 CC2D1AQ6P1N0 951 aaPredicted RBP16.83■□□□□ 0.28
VHL-203ENST00000477538 SCYL2Q6P3W7 929 aa16.83■□□□□ 0.28
VHL-203ENST00000477538 FAM131BQ86XD5 332 aa16.83■□□□□ 0.28
VHL-203ENST00000477538 ARID3BQ8IVW6 561 aaPredicted RBP16.83■□□□□ 0.28
VHL-203ENST00000477538 SYCE1Q8N0S2 351 aa16.83■□□□□ 0.28
VHL-203ENST00000477538 LRRC57Q8N9N7 239 aa16.83■□□□□ 0.28
VHL-203ENST00000477538 USP13Q92995 863 aaPredicted RBP16.83■□□□□ 0.28
VHL-203ENST00000477538 SLC39A13Q96H72 371 aa16.83■□□□□ 0.28
VHL-203ENST00000477538 FCRL2Q96LA5 508 aaPredicted RBP16.83■□□□□ 0.28
VHL-203ENST00000477538 ALS2CR12Q96Q35 445 aa16.83■□□□□ 0.28
VHL-203ENST00000477538 IRX2Q9BZI1 471 aaPredicted RBP16.83■□□□□ 0.28
VHL-203ENST00000477538 HYOU1Q9Y4L1 999 aa16.83■□□□□ 0.28
VHL-203ENST00000477538 ALG6Q9Y672 507 aa16.83■□□□□ 0.28
VHL-203ENST00000477538 NUP205Q92621 2012 aa16.82■□□□□ 0.28
VHL-203ENST00000477538 C5orf42Q9H799 3197 aa16.82■□□□□ 0.28
VHL-203ENST00000477538 SPOPO43791 374 aa16.82■□□□□ 0.28
VHL-203ENST00000477538 STC2O76061 302 aa16.82■□□□□ 0.28
VHL-203ENST00000477538 APOEP02649 317 aa16.82■□□□□ 0.28
VHL-203ENST00000477538 SLC2A3P11169 496 aa16.82■□□□□ 0.28
VHL-203ENST00000477538 COMTP21964 271 aa16.82■□□□□ 0.28
VHL-203ENST00000477538 MIPP30301 263 aa16.82■□□□□ 0.28
VHL-203ENST00000477538 CCR1P32246 355 aa16.82■□□□□ 0.28
VHL-203ENST00000477538 KCNQ1P51787 676 aa16.82■□□□□ 0.28
VHL-203ENST00000477538 ZXDBP98169 803 aa16.82■□□□□ 0.28
VHL-203ENST00000477538 PPP2R5DQ14738 602 aa16.82■□□□□ 0.28
VHL-203ENST00000477538 FAM78AQ5JUQ0 283 aa16.82■□□□□ 0.28
VHL-203ENST00000477538 BRMS1LQ5PSV4 323 aa16.82■□□□□ 0.28
VHL-203ENST00000477538 NUGGCQ68CJ6 796 aa16.82■□□□□ 0.28
VHL-203ENST00000477538 PTCRAQ6ISU1 281 aaPredicted RBP16.82■□□□□ 0.28
VHL-203ENST00000477538 OTOP3Q7RTS5 596 aa16.82■□□□□ 0.28
VHL-203ENST00000477538 SLFN11Q7Z7L1 901 aa16.82■□□□□ 0.28
VHL-203ENST00000477538 DDX42Q86XP3 938 aaKnown RBP eCLIP16.82■□□□□ 0.28
VHL-203ENST00000477538 TTC16Q8NEE8 873 aa16.82■□□□□ 0.28
VHL-203ENST00000477538 TRIM58Q8NG06 486 aa16.82■□□□□ 0.28
VHL-203ENST00000477538 ADAMTS19Q8TE59 1207 aa16.82■□□□□ 0.28
VHL-203ENST00000477538 SMARCD2Q92925 531 aa16.82■□□□□ 0.28
VHL-203ENST00000477538 ASB16Q96NS5 453 aa16.82■□□□□ 0.28
VHL-203ENST00000477538 WDCPQ9H6R7 721 aa16.82■□□□□ 0.28
VHL-203ENST00000477538 KIF9Q9HAQ2 790 aa16.82■□□□□ 0.28
VHL-203ENST00000477538 PRDM6Q9NQX0 595 aa16.82■□□□□ 0.28
VHL-203ENST00000477538 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.82■□□□□ 0.28
VHL-203ENST00000477538 PCSK1NQ9UHG2 260 aa16.82■□□□□ 0.28
VHL-203ENST00000477538 USP18Q9UMW8 372 aa16.82■□□□□ 0.28
VHL-203ENST00000477538 CCL26Q9Y258 94 aa16.82■□□□□ 0.28
VHL-203ENST00000477538 ZFP37Q9Y6Q3 630 aaPredicted RBP16.82■□□□□ 0.28
VHL-203ENST00000477538 TICRRQ7Z2Z1 1910 aa16.82■□□□□ 0.28
VHL-203ENST00000477538 LEFTY2O00292 366 aa16.81■□□□□ 0.28
VHL-203ENST00000477538 PRPSAP2O60256 369 aa16.81■□□□□ 0.28
VHL-203ENST00000477538 KIF5CO60282 957 aa16.81■□□□□ 0.28
VHL-203ENST00000477538 LAMP2P13473 410 aa16.81■□□□□ 0.28
VHL-203ENST00000477538 TCF4P15884 667 aa16.81■□□□□ 0.28
VHL-203ENST00000477538 SP100P23497 879 aaPredicted RBP16.81■□□□□ 0.28
VHL-203ENST00000477538 TFF2Q03403 129 aa16.81■□□□□ 0.28
VHL-203ENST00000477538 USP4Q13107 963 aa16.81■□□□□ 0.28
VHL-203ENST00000477538 SMAD2Q15796 467 aaKnown RBP16.81■□□□□ 0.28
VHL-203ENST00000477538 HADHQ16836 314 aaKnown RBP16.81■□□□□ 0.28
VHL-203ENST00000477538 PUS10Q3MIT2 529 aaKnown RBP16.81■□□□□ 0.28
VHL-203ENST00000477538 UNC45BQ8IWX7 931 aa16.81■□□□□ 0.28
VHL-203ENST00000477538 CELF5Q8N6W0 485 aaKnown RBP16.81■□□□□ 0.28
VHL-203ENST00000477538 CCDC185Q8N715 623 aa16.81■□□□□ 0.28
VHL-203ENST00000477538 SH3RF2Q8TEC5 729 aa16.81■□□□□ 0.28
VHL-203ENST00000477538 WBP2Q969T9 261 aa16.81■□□□□ 0.28
VHL-203ENST00000477538 ACSF2Q96CM8 615 aaPredicted RBP16.81■□□□□ 0.28
VHL-203ENST00000477538 PEBP4Q96S96 227 aa16.81■□□□□ 0.28
VHL-203ENST00000477538 TKTL2Q9H0I9 626 aa16.81■□□□□ 0.28
VHL-203ENST00000477538 ARHGEF38Q9NXL2 777 aa16.81■□□□□ 0.28
VHL-203ENST00000477538 CFAP97Q9P2B7 532 aa16.81■□□□□ 0.28
VHL-203ENST00000477538 SH3BP1Q9Y3L3 701 aa16.81■□□□□ 0.28
VHL-203ENST00000477538 KCNU1A8MYU2 1149 aa16.8■□□□□ 0.28
VHL-203ENST00000477538 FTCDO95954 541 aa16.8■□□□□ 0.28
VHL-203ENST00000477538 MOCS2O96007 188 aaPredicted RBP16.8■□□□□ 0.28
VHL-203ENST00000477538 TCF3P15923 654 aa16.8■□□□□ 0.28
VHL-203ENST00000477538 CORO1AP31146 461 aaKnown RBP16.8■□□□□ 0.28
VHL-203ENST00000477538 GJC1P36383 396 aa16.8■□□□□ 0.28
VHL-203ENST00000477538 HARS2P49590 506 aaKnown RBP16.8■□□□□ 0.28
VHL-203ENST00000477538 TAS2R40P59535 323 aa16.8■□□□□ 0.28
VHL-203ENST00000477538 SLC25A11Q02978 314 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms