RNA–Protein interactions for RNA: ENST00000477487.5

TNRC6A-206, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 2,740 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-206ENST00000477487 ZNF771Q7L3S4 317 aaPredicted RBP12.28□□□□□ -0.44
TNRC6A-206ENST00000477487 RUBCNQ92622 972 aa12.28□□□□□ -0.44
TNRC6A-206ENST00000477487 ZNF689Q96CS4 500 aaPredicted RBP12.28□□□□□ -0.44
TNRC6A-206ENST00000477487 ZIM3Q96PE6 472 aa12.28□□□□□ -0.44
TNRC6A-206ENST00000477487 CSPG4P5Q96PW8 444 aa12.28□□□□□ -0.44
TNRC6A-206ENST00000477487 SEZ6LQ9BYH1 1024 aa12.28□□□□□ -0.44
TNRC6A-206ENST00000477487 ADAM7Q9H2U9 754 aa12.28□□□□□ -0.44
TNRC6A-206ENST00000477487 ACBD3Q9H3P7 528 aa12.28□□□□□ -0.44
TNRC6A-206ENST00000477487 CYLDQ9NQC7 956 aa12.28□□□□□ -0.44
TNRC6A-206ENST00000477487 RYDENQ9NUL5 291 aaKnown RBP12.28□□□□□ -0.44
TNRC6A-206ENST00000477487 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.28□□□□□ -0.44
TNRC6A-206ENST00000477487 TCRBV7S3A2A0A539 114 aa12.27□□□□□ -0.44
TNRC6A-206ENST00000477487 FAM187AA6NFU0 413 aa12.27□□□□□ -0.44
TNRC6A-206ENST00000477487 GOLGA8MH3BSY2 632 aa12.27□□□□□ -0.44
TNRC6A-206ENST00000477487 SGK1O00141 431 aa12.27□□□□□ -0.44
TNRC6A-206ENST00000477487 TRAPPC3O43617 180 aa12.27□□□□□ -0.44
TNRC6A-206ENST00000477487 ATF6P18850 670 aa12.27□□□□□ -0.44
TNRC6A-206ENST00000477487 ADCY8P40145 1251 aa12.27□□□□□ -0.44
TNRC6A-206ENST00000477487 VCPP55072 806 aaKnown RBP12.27□□□□□ -0.44
TNRC6A-206ENST00000477487 BTG3Q14201 252 aaPredicted RBP12.27□□□□□ -0.44
TNRC6A-206ENST00000477487 ACAP1Q15027 740 aa12.27□□□□□ -0.44
TNRC6A-206ENST00000477487 HSP90B2PQ58FF3 399 aa12.27□□□□□ -0.44
TNRC6A-206ENST00000477487 FAXCQ5TGI0 409 aa12.27□□□□□ -0.44
TNRC6A-206ENST00000477487 RASIP1Q5U651 963 aa12.27□□□□□ -0.44
TNRC6A-206ENST00000477487 MFSD5Q6N075 450 aa12.27□□□□□ -0.44
TNRC6A-206ENST00000477487 DEPDC1BQ8WUY9 529 aa12.27□□□□□ -0.44
TNRC6A-206ENST00000477487 CLSTN3Q9BQT9 956 aa12.27□□□□□ -0.44
TNRC6A-206ENST00000477487 TMEM106CQ9BVX2 250 aa12.27□□□□□ -0.44
TNRC6A-206ENST00000477487 EPB41L4BQ9H329 900 aa12.27□□□□□ -0.44
TNRC6A-206ENST00000477487 VIPAS39Q9H9C1 493 aa12.27□□□□□ -0.44
TNRC6A-206ENST00000477487 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.27□□□□□ -0.44
TNRC6A-206ENST00000477487 VPS18Q9P253 973 aa12.27□□□□□ -0.44
TNRC6A-206ENST00000477487 MAGED2Q9UNF1 606 aaPredicted RBP12.27□□□□□ -0.44
TNRC6A-206ENST00000477487 SYN3O14994 580 aa12.27□□□□□ -0.45
TNRC6A-206ENST00000477487 SYF2O95926 243 aaKnown RBP12.27□□□□□ -0.45
TNRC6A-206ENST00000477487 EFEMP2O95967 443 aa12.27□□□□□ -0.45
TNRC6A-206ENST00000477487 HSD17B3P37058 310 aa12.27□□□□□ -0.45
TNRC6A-206ENST00000477487 EIF3EP60228 445 aaKnown RBP12.27□□□□□ -0.45
TNRC6A-206ENST00000477487 YWHAGP61981 247 aaKnown RBP eCLIP12.27□□□□□ -0.45
TNRC6A-206ENST00000477487 ROR1Q01973 937 aa12.27□□□□□ -0.45
TNRC6A-206ENST00000477487 P3H1Q32P28 736 aa12.27□□□□□ -0.45
TNRC6A-206ENST00000477487 ANKRD22Q5VYY1 191 aa12.27□□□□□ -0.45
TNRC6A-206ENST00000477487 FBXO22Q8NEZ5 403 aa12.27□□□□□ -0.45
TNRC6A-206ENST00000477487 FAM204AQ9H8W3 233 aa12.27□□□□□ -0.45
TNRC6A-206ENST00000477487 PRUNE2Q8WUY3 3088 aa12.27□□□□□ -0.45
TNRC6A-206ENST00000477487 KIAA0355O15063 1070 aa12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 ARHGEF15O94989 841 aa12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 SHBGP04278 402 aa12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 RBP3P10745 1247 aa12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 PTPN7P35236 360 aa12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 RDXP35241 583 aaKnown RBP12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 COPS2P61201 443 aa12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 DPYSL2Q16555 572 aa12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 BOLA3Q53S33 107 aa12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 C4orf50Q6ZRC1 276 aa12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 STRADAQ7RTN6 431 aa12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 TMC3Q7Z5M5 1100 aa12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 ALLCQ8N6M5 410 aa12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 CAVIN3Q969G5 261 aa12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 SIK2Q9H0K1 926 aa12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 RAB17Q9H0T7 212 aa12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 SEMA4AQ9H3S1 761 aa12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 ZMYND8Q9ULU4 1186 aaPredicted RBP12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 PCDHB5Q9Y5E4 795 aa12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 SHROOM3Q8TF72 1996 aa12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 SCAMP3O14828 347 aaKnown RBP12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 MFSD11O43934 449 aa12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 PIAS1O75925 651 aa12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 MOCS2O96007 188 aaPredicted RBP12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 RBL1P28749 1068 aa12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 IRAK1P51617 712 aa12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 GPS1Q13098 491 aa12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 PTK6Q13882 451 aa12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 NCBP2-AS2Q69YL0 99 aa12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 UBE2Q1Q7Z7E8 422 aa12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 C7orf61Q8IZ16 206 aa12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 ARL8AQ96BM9 186 aa12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 FMO2Q99518 471 aa12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 LGMNQ99538 433 aa12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 MAK16Q9BXY0 300 aaKnown RBP12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 MRPL9Q9BYD2 267 aaKnown RBP12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 TKTL2Q9H0I9 626 aa12.26□□□□□ -0.45
TNRC6A-206ENST00000477487 NRG2O14511 850 aaPredicted RBP12.25□□□□□ -0.45
TNRC6A-206ENST00000477487 FBXO21O94952 628 aa12.25□□□□□ -0.45
TNRC6A-206ENST00000477487 HMBSP08397 361 aa12.25□□□□□ -0.45
TNRC6A-206ENST00000477487 LINC00271P0C7V0 271 aa12.25□□□□□ -0.45
TNRC6A-206ENST00000477487 MYOGP15173 224 aa12.25□□□□□ -0.45
TNRC6A-206ENST00000477487 ADRA1BP35368 520 aa12.25□□□□□ -0.45
TNRC6A-206ENST00000477487 SCNN1AP37088 669 aa12.25□□□□□ -0.45
TNRC6A-206ENST00000477487 SNX16P57768 344 aa12.25□□□□□ -0.45
TNRC6A-206ENST00000477487 CUL1Q13616 776 aa12.25□□□□□ -0.45
TNRC6A-206ENST00000477487 FASTKD3Q14CZ7 662 aaKnown RBP12.25□□□□□ -0.45
TNRC6A-206ENST00000477487 ZKSCAN8Q15776 578 aaPredicted RBP12.25□□□□□ -0.45
TNRC6A-206ENST00000477487 PSMD5Q16401 504 aa12.25□□□□□ -0.45
TNRC6A-206ENST00000477487 SKIDA1Q1XH10 827 aa12.25□□□□□ -0.45
TNRC6A-206ENST00000477487 EMBQ6PCB8 327 aa12.25□□□□□ -0.45
TNRC6A-206ENST00000477487 DCP1BQ8IZD4 617 aaKnown RBP12.25□□□□□ -0.45
TNRC6A-206ENST00000477487 RNF139Q8WU17 664 aa12.25□□□□□ -0.45
TNRC6A-206ENST00000477487 UBLCP1Q8WVY7 318 aaPredicted RBP12.25□□□□□ -0.45
TNRC6A-206ENST00000477487 ART4Q93070 314 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms