RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	TMEM150B	A6NC51	233 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	TRIM43B	A6NCK2	446 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	PRAMEF25	A6NGN4	478 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CDC14B	O60729	498 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CLASP2	O75122	1294 aa	Known RBP	4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	GCNT3	O95395	438 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CRTAM	O95727	393 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	PRKCB	P05771	671 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	DARS	P14868	501 aa	Known RBP	4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CSF2RA	P15509	400 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	IBSP	P21815	317 aa	Predicted RBP	4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	HOXC8	P31273	242 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	LIG4	P49917	911 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	GPC3	P51654	580 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	KCNQ1	P51787	676 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	NDUFA8	P51970	172 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	SLC12A3	P55017	1021 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	ABHD18	Q0P651	414 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	PRPF4B	Q13523	1007 aa	Known RBP	4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	EIF4H	Q15056	248 aa	Known RBP	4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	POSTN	Q15063	836 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CRY1	Q16526	586 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	KYAT1	Q16773	422 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	NRN1L	Q496H8	165 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	TM4SF20	Q53R12	229 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	NAALADL2	Q58DX5	795 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	FBXO47	Q5MNV8	452 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	MARCH8	Q5T0T0	291 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	KANK2	Q63ZY3	851 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	TRIM68	Q6AZZ1	485 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	TWF2	Q6IBS0	349 aa	Known RBP	4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	SLFN12L	Q6IEE8	588 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	FSTL4	Q6MZW2	842 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	NOTUM	Q6P988	496 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	LRSAM1	Q6UWE0	723 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	KRBA2	Q6ZNG9	492 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	C1orf186	Q6ZWK4	172 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	DBF4B	Q8NFT6	615 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	RSPH1	Q8WYR4	309 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	SMARCE1	Q969G3	411 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	HVCN1	Q96D96	273 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CCDC51	Q96ER9	411 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	TIGD1	Q96MW7	591 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CEP89	Q96ST8	783 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	MRPL4	Q9BYD3	311 aa	Known RBP	4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	IKZF4	Q9H2S9	585 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	TMEM206	Q9H813	350 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	UBN1	Q9NPG3	1134 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	WRAP73	Q9P2S5	460 aa	Predicted RBP	4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	MSRA	Q9UJ68	235 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	PIN4	Q9Y237	131 aa	Known RBP	4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	PCDHB7	Q9Y5E2	793 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	SCN10A	Q9Y5Y9	1956 aa		4.9	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	LOXHD1	Q8IVV2	1947 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289		A0A1W2PPC1	479 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289		H0YGN5	161 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	ACKR2	O00590	384 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	SLC16A4	O15374	487 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	ARHGAP6	O43182	974 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	XPOT	O43592	962 aa	Known RBP	4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	LETM1	O95202	739 aa	Predicted RBP	4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	STBD1	O95210	358 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	LDHA	P00338	332 aa	Known RBP	4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CHRNA1	P02708	482 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	GLRA2	P23416	452 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CD52	P31358	61 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	ARL2	P36404	184 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	PTEN	P60484	403 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	GABRE	P78334	506 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	DGCR2	P98153	550 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CD83	Q01151	205 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CAPS	Q13938	189 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	GIT2	Q14161	759 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	BMS1	Q14692	1282 aa	Known RBP	4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	RAB30	Q15771	203 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	TRIM71	Q2Q1W2	868 aa	Known RBP	4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	DCAF4L1	Q3SXM0	396 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	SPOUT1	Q5T280	376 aa	Known RBP	4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	CLEC17A	Q6ZS10	378 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	USP49	Q70CQ1	688 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	UNC13D	Q70J99	1090 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	ZNF365	Q70YC5	407 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	SLC24A5	Q71RS6	500 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	OTOP2	Q7RTS6	562 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	KCNK18	Q7Z418	384 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	HAUS6	Q7Z4H7	955 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	POLN	Q7Z5Q5	900 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	USP37	Q86T82	979 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	TDH	Q8IZJ6	230 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	MYOCD	Q8IZQ8	938 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	RNF169	Q8NCN4	708 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	GOLGA5	Q8TBA6	731 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	PHOSPHO2	Q8TCD6	241 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	URGCP	Q8TCY9	931 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	NOC3L	Q8WTT2	800 aa	Known RBP	4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	STAM	Q92783	540 aa		4.89	□□□□□ -1.63
NSMCE4A-208	ENST00000477289	ZNF668	Q96K58	619 aa	Predicted RBP	4.89	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms