RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 IL19Q9UHD0 177 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 BAG5Q9UL15 447 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 CORO1CQ9ULV4 474 aaPredicted RBP3.06□□□□□ -1.92
HMGN4-202ENST00000477243 HSF4Q9ULV5 492 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 CAPN11Q9UMQ6 739 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 DAPP1Q9UN19 280 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 MINPP1Q9UNW1 487 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.06□□□□□ -1.92
HMGN4-202ENST00000477243 SESN1Q9Y6P5 492 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 NBEAL1Q6ZS30 2694 aa3.06□□□□□ -1.92
HMGN4-202ENST00000477243 MROH2AA6NES4 1674 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 CFAP74Q9C0B2 1584 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 PRDM15P57071 1507 aaPredicted RBP3.05□□□□□ -1.92
HMGN4-202ENST00000477243 CAMSAP2Q08AD1 1489 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 KDM3AQ9Y4C1 1321 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 ELOA3CA0A087WX78 387 aaPredicted RBP3.05□□□□□ -1.92
HMGN4-202ENST00000477243 hCG_1809904A0A1W2PP81 198 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 A0A1W2PPE2 198 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 A0A1W2PR64 198 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 GAGE10A6NGK3 116 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 LIPT2A6NK58 231 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 ELOA3DA6NLF2 546 aaPredicted RBP3.05□□□□□ -1.92
HMGN4-202ENST00000477243 FAM90A27PA6NNH2 459 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 A8MV72 311 aaPredicted RBP3.05□□□□□ -1.92
HMGN4-202ENST00000477243 NUDT19A8MXV4 375 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 STX16-NPEPL1H3BU86 382 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 K7EPI3 171 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 STX16O14662 325 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 TP73O15350 636 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 BCAT2O15382 392 aaPredicted RBP3.05□□□□□ -1.92
HMGN4-202ENST00000477243 PRPF4O43172 522 aaKnown RBP eCLIP3.05□□□□□ -1.92
HMGN4-202ENST00000477243 RIPK2O43353 540 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 NEMFO60524 1076 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 KLHL41O60662 606 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 ADAM11O75078 769 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 ENTPD3O75355 529 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 DDHD2O94830 711 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 ABHD16AO95870 558 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 OLFM2O95897 454 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 PRLP01236 227 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 VIPP01282 170 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 FYNP06241 537 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 ANXA6P08133 673 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 TOP1P11387 765 aaKnown RBP3.05□□□□□ -1.92
HMGN4-202ENST00000477243 BMP4P12644 408 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 XRCC6P12956 609 aaKnown RBP eCLIP3.05□□□□□ -1.92
HMGN4-202ENST00000477243 FDPSP14324 419 aaKnown RBP3.05□□□□□ -1.92
HMGN4-202ENST00000477243 SYN1P17600 705 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 PTAFRP25105 342 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 SERPINA4P29622 427 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 ADSSP30520 456 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 ASMTP46597 345 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 PIP4K2AP48426 406 aaPredicted RBP3.05□□□□□ -1.92
HMGN4-202ENST00000477243 LIG4P49917 911 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 PER3P56645 1201 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 DDR1Q08345 913 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 DMTNQ08495 405 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 GOLGA8DPQ0D2H9 430 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 NFE2L1Q14494 772 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 TRADDQ15628 312 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 TBCCQ15814 346 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 SKIDA1Q1XH10 827 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 TYSND1Q2T9J0 566 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 ELOA3BQ3SY89 546 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 TBRG1Q3YBR2 411 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 NRN1LQ496H8 165 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 ZNF805Q5CZA5 627 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 TEX35Q5T0J7 233 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 CCDC183Q5T5S1 534 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 TTC22Q5TAA0 569 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 HLA-DQA1Q5Y7H0 255 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 ADALQ6DHV7 355 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 WDR93Q6P2C0 686 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 MTFR2Q6P444 385 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 FDX2Q6P4F2 183 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 FAM111BQ6SJ93 734 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 LINC00696Q6ZRV3 163 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 RGS9BPQ6ZS82 235 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 RABEPKQ7Z6M1 372 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 FAM90A1Q86YD7 464 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 CILP2Q8IUL8 1156 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 PEX5LQ8IYB4 626 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 MPP5Q8N3R9 675 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 C12orf50Q8NA57 414 aaPredicted RBP3.05□□□□□ -1.92
HMGN4-202ENST00000477243 POC5Q8NA72 575 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 ELOA3Q8NG57 546 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 OR2I1PQ8NGU4 316 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 CCDC110Q8TBZ0 833 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 KIAA1524Q8TCG1 905 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 HASPINQ8TF76 798 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 PRPF31Q8WWY3 499 aaKnown RBP3.05□□□□□ -1.92
HMGN4-202ENST00000477243 ZNF75CPQ92670 426 aaPredicted RBP3.05□□□□□ -1.92
HMGN4-202ENST00000477243 TNPO1Q92973 898 aaKnown RBP3.05□□□□□ -1.92
HMGN4-202ENST00000477243 SPSB4Q96A44 273 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 CFAP36Q96G28 342 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 TOE1Q96GM8 510 aaKnown RBP3.05□□□□□ -1.92
HMGN4-202ENST00000477243 PDLIM5Q96HC4 596 aaKnown RBP3.05□□□□□ -1.92
HMGN4-202ENST00000477243 TMX3Q96JJ7 454 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 GCNAQ96QF7 691 aa3.05□□□□□ -1.92
HMGN4-202ENST00000477243 SLX1AQ9BQ83 275 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms