RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 PRAMEF14Q5SWL7 426 aa12.58□□□□□ -0.4
HDAC6-219ENST00000476625 SV2AQ7L0J3 742 aa12.58□□□□□ -0.4
HDAC6-219ENST00000476625 GLRX5Q86SX6 157 aa12.58□□□□□ -0.4
HDAC6-219ENST00000476625 DENND1CQ8IV53 801 aa12.58□□□□□ -0.4
HDAC6-219ENST00000476625 C12orf56Q8IXR9 622 aa12.58□□□□□ -0.4
HDAC6-219ENST00000476625 ZC3H3Q8IXZ2 948 aaKnown RBP12.58□□□□□ -0.4
HDAC6-219ENST00000476625 RHBDD1Q8TEB9 315 aa12.58□□□□□ -0.4
HDAC6-219ENST00000476625 FOXJ1Q92949 421 aa12.58□□□□□ -0.4
HDAC6-219ENST00000476625 CYFIP2Q96F07 1278 aa12.58□□□□□ -0.4
HDAC6-219ENST00000476625 SIPA1Q96FS4 1042 aa12.58□□□□□ -0.4
HDAC6-219ENST00000476625 CIPCQ9C0C6 399 aa12.58□□□□□ -0.4
HDAC6-219ENST00000476625 FBXO44Q9H4M3 255 aa12.58□□□□□ -0.4
HDAC6-219ENST00000476625 COMMD8Q9NX08 183 aa12.58□□□□□ -0.4
HDAC6-219ENST00000476625 DNMT3LQ9UJW3 386 aa12.58□□□□□ -0.4
HDAC6-219ENST00000476625 AGO1Q9UL18 857 aaKnown RBP12.58□□□□□ -0.4
HDAC6-219ENST00000476625 APOBEC2Q9Y235 224 aaKnown RBP12.58□□□□□ -0.4
HDAC6-219ENST00000476625 SHROOM3Q8TF72 1996 aa12.58□□□□□ -0.4
HDAC6-219ENST00000476625 TRABD2BA6NFA1 517 aa12.57□□□□□ -0.4
HDAC6-219ENST00000476625 GFRA2O00451 464 aa12.57□□□□□ -0.4
HDAC6-219ENST00000476625 EPHX1P07099 455 aa12.57□□□□□ -0.4
HDAC6-219ENST00000476625 PLA2G4AP47712 749 aa12.57□□□□□ -0.4
HDAC6-219ENST00000476625 KIF11P52732 1056 aa12.57□□□□□ -0.4
HDAC6-219ENST00000476625 ENPP2Q13822 863 aa12.57□□□□□ -0.4
HDAC6-219ENST00000476625 HNRNPDQ14103 355 aaKnown RBP12.57□□□□□ -0.4
HDAC6-219ENST00000476625 PPP1R26Q5T8A7 1209 aaPredicted RBP12.57□□□□□ -0.4
HDAC6-219ENST00000476625 CNNM4Q6P4Q7 775 aa12.57□□□□□ -0.4
HDAC6-219ENST00000476625 TMPRSS7Q7RTY8 843 aa12.57□□□□□ -0.4
HDAC6-219ENST00000476625 PRCCQ92733 491 aaPredicted RBP12.57□□□□□ -0.4
HDAC6-219ENST00000476625 DCBLD2Q96PD2 775 aa12.57□□□□□ -0.4
HDAC6-219ENST00000476625 HNRNPABQ99729 332 aaKnown RBP12.57□□□□□ -0.4
HDAC6-219ENST00000476625 DMAC2Q9NW81 257 aa12.57□□□□□ -0.4
HDAC6-219ENST00000476625 SERTAD1Q9UHV2 236 aa12.57□□□□□ -0.4
HDAC6-219ENST00000476625 MORC2Q9Y6X9 1032 aaPredicted RBP12.57□□□□□ -0.4
HDAC6-219ENST00000476625 BPTFQ12830 3046 aa12.56□□□□□ -0.4
HDAC6-219ENST00000476625 IGSF10Q6WRI0 2623 aa12.56□□□□□ -0.4
HDAC6-219ENST00000476625 SLC12A8A0AV02 714 aa12.56□□□□□ -0.4
HDAC6-219ENST00000476625 H0Y8X5 98 aa12.56□□□□□ -0.4
HDAC6-219ENST00000476625 TULP2O00295 520 aa12.56□□□□□ -0.4
HDAC6-219ENST00000476625 STX6O43752 255 aa12.56□□□□□ -0.4
HDAC6-219ENST00000476625 ASS1P00966 412 aaKnown RBP12.56□□□□□ -0.4
HDAC6-219ENST00000476625 PDCP20941 246 aa12.56□□□□□ -0.4
HDAC6-219ENST00000476625 PPP3CAQ08209 521 aa12.56□□□□□ -0.4
HDAC6-219ENST00000476625 GOLGA8FQ08AF8 430 aa12.56□□□□□ -0.4
HDAC6-219ENST00000476625 GOLGA8DPQ0D2H9 430 aa12.56□□□□□ -0.4
HDAC6-219ENST00000476625 CAMK2BQ13554 666 aa12.56□□□□□ -0.4
HDAC6-219ENST00000476625 SGSM1Q2NKQ1 1148 aa12.56□□□□□ -0.4
HDAC6-219ENST00000476625 ERICH6BQ5W0A0 696 aa12.56□□□□□ -0.4
HDAC6-219ENST00000476625 CEP135Q66GS9 1140 aa12.56□□□□□ -0.4
HDAC6-219ENST00000476625 DHRS13Q6UX07 377 aa12.56□□□□□ -0.4
HDAC6-219ENST00000476625 ANKS1BQ7Z6G8 1248 aa12.56□□□□□ -0.4
HDAC6-219ENST00000476625 IQUBQ8NA54 791 aa12.56□□□□□ -0.4
HDAC6-219ENST00000476625 WFDC5Q8TCV5 224 aa12.56□□□□□ -0.4
HDAC6-219ENST00000476625 TAS1R2Q8TE23 839 aa12.56□□□□□ -0.4
HDAC6-219ENST00000476625 ARID3AQ99856 593 aa12.56□□□□□ -0.4
HDAC6-219ENST00000476625 KCTD10Q9H3F6 313 aa12.56□□□□□ -0.4
HDAC6-219ENST00000476625 CUEDC2Q9H467 287 aa12.56□□□□□ -0.4
HDAC6-219ENST00000476625 ELOVL2Q9NXB9 296 aa12.56□□□□□ -0.4
HDAC6-219ENST00000476625 SLC27A6Q9Y2P4 619 aa12.56□□□□□ -0.4
HDAC6-219ENST00000476625 SMG1Q96Q15 3661 aaKnown RBP12.56□□□□□ -0.4
HDAC6-219ENST00000476625 SYNCRIPO60506 623 aaKnown RBP12.55□□□□□ -0.4
HDAC6-219ENST00000476625 CUTAO60888 179 aa12.55□□□□□ -0.4
HDAC6-219ENST00000476625 PPP6R2O75170 966 aa12.55□□□□□ -0.4
HDAC6-219ENST00000476625 DKK1O94907 266 aa12.55□□□□□ -0.4
HDAC6-219ENST00000476625 CER1O95813 267 aa12.55□□□□□ -0.4
HDAC6-219ENST00000476625 NR3C1P04150 777 aa12.55□□□□□ -0.4
HDAC6-219ENST00000476625 ITPKBP27987 946 aa12.55□□□□□ -0.4
HDAC6-219ENST00000476625 GCLMP48507 274 aa12.55□□□□□ -0.4
HDAC6-219ENST00000476625 NUMBP49757 651 aa12.55□□□□□ -0.4
HDAC6-219ENST00000476625 INCA1Q0VD86 236 aa12.55□□□□□ -0.4
HDAC6-219ENST00000476625 KMT5BQ4FZB7 885 aa12.55□□□□□ -0.4
HDAC6-219ENST00000476625 SERPINA13PQ6UXR4 307 aa12.55□□□□□ -0.4
HDAC6-219ENST00000476625 BHLHA9Q7RTU4 235 aa12.55□□□□□ -0.4
HDAC6-219ENST00000476625 CCDC186Q7Z3E2 898 aa12.55□□□□□ -0.4
HDAC6-219ENST00000476625 METTL3Q86U44 580 aaKnown RBP12.55□□□□□ -0.4
HDAC6-219ENST00000476625 GATAD2AQ86YP4 633 aa12.55□□□□□ -0.4
HDAC6-219ENST00000476625 CADM4Q8NFZ8 388 aa12.55□□□□□ -0.4
HDAC6-219ENST00000476625 PIP4K2CQ8TBX8 421 aa12.55□□□□□ -0.4
HDAC6-219ENST00000476625 DDI1Q8WTU0 396 aa12.55□□□□□ -0.4
HDAC6-219ENST00000476625 ORAI3Q9BRQ5 295 aa12.55□□□□□ -0.4
HDAC6-219ENST00000476625 LRRC27Q9C0I9 530 aa12.55□□□□□ -0.4
HDAC6-219ENST00000476625 TM9SF3Q9HD45 589 aa12.55□□□□□ -0.4
HDAC6-219ENST00000476625 PCDHA5Q9Y5H7 936 aa12.55□□□□□ -0.4
HDAC6-219ENST00000476625 PLK4O00444 970 aa12.54□□□□□ -0.4
HDAC6-219ENST00000476625 MSI1O43347 362 aaKnown RBP12.54□□□□□ -0.4
HDAC6-219ENST00000476625 C1QL1O75973 258 aa12.54□□□□□ -0.4
HDAC6-219ENST00000476625 FSBPO95073 299 aa12.54□□□□□ -0.4
HDAC6-219ENST00000476625 IGLV3-19P01714 112 aa12.54□□□□□ -0.4
HDAC6-219ENST00000476625 PRR29P0C7W0 189 aa12.54□□□□□ -0.4
HDAC6-219ENST00000476625 ACADMP11310 421 aa12.54□□□□□ -0.4
HDAC6-219ENST00000476625 HOXD9P28356 352 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-219ENST00000476625 HLA-FP30511 346 aa12.54□□□□□ -0.4
HDAC6-219ENST00000476625 AMPD3Q01432 767 aa12.54□□□□□ -0.4
HDAC6-219ENST00000476625 DNAJC3Q13217 504 aa12.54□□□□□ -0.4
HDAC6-219ENST00000476625 KLHDC10Q6PID8 442 aa12.54□□□□□ -0.4
HDAC6-219ENST00000476625 DBX2Q6ZNG2 339 aa12.54□□□□□ -0.4
HDAC6-219ENST00000476625 UNC93AQ86WB7 457 aa12.54□□□□□ -0.4
HDAC6-219ENST00000476625 ADAM32Q8TC27 787 aa12.54□□□□□ -0.4
HDAC6-219ENST00000476625 SEMA4DQ92854 862 aa12.54□□□□□ -0.4
HDAC6-219ENST00000476625 BIRC7Q96CA5 298 aa12.54□□□□□ -0.4
HDAC6-219ENST00000476625 NUP58Q9BVL2 599 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms