RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 CCPG1Q9ULG6 757 aa18.3■□□□□ 0.52
CCM2-207ENST00000475551 PCDHGB4Q9UN71 923 aa18.3■□□□□ 0.52
CCM2-207ENST00000475551 PCDHGB5Q9Y5G0 923 aa18.3■□□□□ 0.52
CCM2-207ENST00000475551 LTBP3Q9NS15 1303 aa18.3■□□□□ 0.52
CCM2-207ENST00000475551 ZNF195O14628 629 aa18.3■□□□□ 0.52
CCM2-207ENST00000475551 SERPINE1P05121 402 aa18.3■□□□□ 0.52
CCM2-207ENST00000475551 GHRHRQ02643 423 aa18.3■□□□□ 0.52
CCM2-207ENST00000475551 GPR162Q16538 588 aa18.3■□□□□ 0.52
CCM2-207ENST00000475551 NPNTQ6UXI9 565 aa18.3■□□□□ 0.52
CCM2-207ENST00000475551 EFCAB3Q8N7B9 438 aa18.3■□□□□ 0.52
CCM2-207ENST00000475551 ADCY4Q8NFM4 1077 aa18.3■□□□□ 0.52
CCM2-207ENST00000475551 OR5B17Q8NGF7 314 aa18.3■□□□□ 0.52
CCM2-207ENST00000475551 GSDMBQ8TAX9 411 aa18.3■□□□□ 0.52
CCM2-207ENST00000475551 PPP4R1Q8TF05 950 aa18.3■□□□□ 0.52
CCM2-207ENST00000475551 RTP4Q96DX8 246 aa18.3■□□□□ 0.52
CCM2-207ENST00000475551 SHCBP1LQ9BZQ2 653 aa18.3■□□□□ 0.52
CCM2-207ENST00000475551 STK39Q9UEW8 545 aa18.3■□□□□ 0.52
CCM2-207ENST00000475551 SCN9AQ15858 1988 aa18.3■□□□□ 0.52
CCM2-207ENST00000475551 NFIBO00712 420 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 DGAT1O75907 488 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 LDHAP00338 332 aaKnown RBP18.29■□□□□ 0.52
CCM2-207ENST00000475551 ICAM1P05362 532 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 FAM58BPP0C7Q3 252 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 COX4I1P13073 169 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 HSPA13P48723 471 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 RPL10AP62906 217 aaKnown RBP18.29■□□□□ 0.52
CCM2-207ENST00000475551 FKBP1AP62942 108 aaKnown RBP18.29■□□□□ 0.52
CCM2-207ENST00000475551 ADGRE1Q14246 886 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 DUS1LQ6P1R4 473 aaKnown RBP18.29■□□□□ 0.52
CCM2-207ENST00000475551 RSPH3Q86UC2 560 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 NIM1KQ8IY84 436 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 ACMSDQ8TDX5 336 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 CLEC4DQ8WXI8 215 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 CNBD2Q96M20 576 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 LRGUKQ96M69 825 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 CSRNP1Q96S65 589 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 SORT1Q99523 831 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 PRPF18Q99633 342 aaKnown RBP18.29■□□□□ 0.52
CCM2-207ENST00000475551 MRPL1Q9BYD6 325 aaKnown RBP18.29■□□□□ 0.52
CCM2-207ENST00000475551 HAPLN2Q9GZV7 340 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 VPS33BQ9H267 617 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 IFT122Q9HBG6 1241 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 XPNPEP1Q9NQW7 623 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 EMCNQ9ULC0 261 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 CEPT1Q9Y6K0 416 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 AK5Q9Y6K8 562 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 LOC100653049A0A140TA62 436 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 KRT34O76011 436 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 TOP3BO95985 862 aaKnown RBP18.29■□□□□ 0.52
CCM2-207ENST00000475551 ASS1P00966 412 aaKnown RBP18.29■□□□□ 0.52
CCM2-207ENST00000475551 GRK2P25098 689 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 GALK1P51570 392 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 PTPN20Q4JDL3 420 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 ZFP1Q6P2D0 407 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 MCF2L2Q86YR7 1114 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 ABTB1Q969K4 478 aaPredicted RBP18.29■□□□□ 0.52
CCM2-207ENST00000475551 CALN1Q9BXU9 219 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.29■□□□□ 0.52
CCM2-207ENST00000475551 FBXO28Q9NVF7 368 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 PNPOQ9NVS9 261 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 PCSK1NQ9UHG2 260 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 HERC5Q9UII4 1024 aaKnown RBP18.29■□□□□ 0.52
CCM2-207ENST00000475551 APPL1Q9UKG1 709 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 PRPF19Q9UMS4 504 aaKnown RBP18.29■□□□□ 0.52
CCM2-207ENST00000475551 CNTNAP2Q9UHC6 1331 aa18.29■□□□□ 0.52
CCM2-207ENST00000475551 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.28■□□□□ 0.52
CCM2-207ENST00000475551 GLRA3O75311 464 aa18.28■□□□□ 0.52
CCM2-207ENST00000475551 ENDOD1O94919 500 aa18.28■□□□□ 0.52
CCM2-207ENST00000475551 STBD1O95210 358 aa18.28■□□□□ 0.52
CCM2-207ENST00000475551 TRUB2O95900 331 aaKnown RBP18.28■□□□□ 0.52
CCM2-207ENST00000475551 CDH2P19022 906 aaPredicted RBP18.28■□□□□ 0.52
CCM2-207ENST00000475551 TMED1Q13445 227 aa18.28■□□□□ 0.52
CCM2-207ENST00000475551 FSCBQ5H9T9 825 aa18.28■□□□□ 0.52
CCM2-207ENST00000475551 FAM47CQ5HY64 1035 aa18.28■□□□□ 0.52
CCM2-207ENST00000475551 SLFN12LQ6IEE8 588 aa18.28■□□□□ 0.52
CCM2-207ENST00000475551 TSHZ1Q6ZSZ6 1077 aa18.28■□□□□ 0.52
CCM2-207ENST00000475551 MCUQ8NE86 351 aa18.28■□□□□ 0.52
CCM2-207ENST00000475551 HSPH1Q92598 858 aa18.28■□□□□ 0.52
CCM2-207ENST00000475551 SDCBP2Q9H190 292 aa18.28■□□□□ 0.52
CCM2-207ENST00000475551 COL2A1P02458 1487 aaPredicted RBP18.28■□□□□ 0.52
CCM2-207ENST00000475551 H7C0C1 242 aa18.28■□□□□ 0.52
CCM2-207ENST00000475551 RAD17O75943 681 aa18.28■□□□□ 0.52
CCM2-207ENST00000475551 CAPNS1P04632 268 aa18.28■□□□□ 0.52
CCM2-207ENST00000475551 HNRNPCP07910 306 aaKnown RBP eCLIP18.28■□□□□ 0.52
CCM2-207ENST00000475551 NCF2P19878 526 aaPredicted RBP18.28■□□□□ 0.52
CCM2-207ENST00000475551 MIPP30301 263 aa18.28■□□□□ 0.52
CCM2-207ENST00000475551 ATP5OP48047 213 aa18.28■□□□□ 0.52
CCM2-207ENST00000475551 PPIDQ08752 370 aaKnown RBP18.28■□□□□ 0.52
CCM2-207ENST00000475551 TAF5Q15542 800 aa18.28■□□□□ 0.52
CCM2-207ENST00000475551 TRMT10BQ6PF06 316 aaKnown RBP18.28■□□□□ 0.52
CCM2-207ENST00000475551 CEP70Q8NHQ1 597 aa18.28■□□□□ 0.52
CCM2-207ENST00000475551 TFAP2BQ92481 460 aa18.28■□□□□ 0.52
CCM2-207ENST00000475551 KLC2Q9H0B6 622 aa18.28■□□□□ 0.52
CCM2-207ENST00000475551 CISHQ9NSE2 258 aa18.28■□□□□ 0.52
CCM2-207ENST00000475551 TBCCD1Q9NVR7 557 aa18.28■□□□□ 0.52
CCM2-207ENST00000475551 RIMS3Q9UJD0 308 aa18.28■□□□□ 0.52
CCM2-207ENST00000475551 SERPINA10Q9UK55 444 aa18.28■□□□□ 0.52
CCM2-207ENST00000475551 PCDHA10Q9Y5I2 948 aa18.28■□□□□ 0.52
CCM2-207ENST00000475551 PLIN3O60664 434 aa18.27■□□□□ 0.52
CCM2-207ENST00000475551 ATG7O95352 703 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms