RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 MBD3L5A6NJ08 208 aaPredicted RBP6.1□□□□□ -1.43
SDHB-205ENST00000475506 A8MVJ9 347 aa6.1□□□□□ -1.43
SDHB-205ENST00000475506 VWC2LB2RUY7 222 aa6.1□□□□□ -1.43
SDHB-205ENST00000475506 CYP27B1O15528 508 aa6.1□□□□□ -1.43
SDHB-205ENST00000475506 DHX16O60231 1041 aaKnown RBP6.1□□□□□ -1.43
SDHB-205ENST00000475506 ZBED4O75132 1171 aa6.1□□□□□ -1.43
SDHB-205ENST00000475506 F9P00740 461 aa6.1□□□□□ -1.43
SDHB-205ENST00000475506 FESP07332 822 aa6.1□□□□□ -1.43
SDHB-205ENST00000475506 IL6RP08887 468 aaPredicted RBP6.1□□□□□ -1.43
SDHB-205ENST00000475506 NR4A1P22736 598 aa6.1□□□□□ -1.43
SDHB-205ENST00000475506 ITPKBP27987 946 aa6.1□□□□□ -1.43
SDHB-205ENST00000475506 DRG2P55039 364 aaKnown RBP6.1□□□□□ -1.43
SDHB-205ENST00000475506 NUCB1Q02818 461 aa6.1□□□□□ -1.43
SDHB-205ENST00000475506 CYP1B1Q16678 543 aa6.1□□□□□ -1.43
SDHB-205ENST00000475506 RABL3Q5HYI8 236 aa6.1□□□□□ -1.43
SDHB-205ENST00000475506 TREML2Q5T2D2 321 aa6.1□□□□□ -1.43
SDHB-205ENST00000475506 SNX30Q5VWJ9 437 aa6.1□□□□□ -1.43
SDHB-205ENST00000475506 ZNF280DQ6N043 979 aa6.1□□□□□ -1.43
SDHB-205ENST00000475506 TMTC3Q6ZXV5 915 aa6.1□□□□□ -1.43
SDHB-205ENST00000475506 B4GALNT4Q76KP1 1039 aa6.1□□□□□ -1.43
SDHB-205ENST00000475506 LRRC8DQ7L1W4 858 aa6.1□□□□□ -1.43
SDHB-205ENST00000475506 ARMC8Q8IUR7 673 aa6.1□□□□□ -1.43
SDHB-205ENST00000475506 OR8H2Q8N162 312 aa6.1□□□□□ -1.43
SDHB-205ENST00000475506 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.1□□□□□ -1.43
SDHB-205ENST00000475506 PTGR2Q8N8N7 351 aaPredicted RBP6.1□□□□□ -1.43
SDHB-205ENST00000475506 MYCBPAPQ8TBZ2 947 aa6.1□□□□□ -1.43
SDHB-205ENST00000475506 CREB3L4Q8TEY5 395 aa6.1□□□□□ -1.43
SDHB-205ENST00000475506 FUBP1Q96AE4 644 aaKnown RBP6.1□□□□□ -1.43
SDHB-205ENST00000475506 RSPRY1Q96DX4 576 aa6.1□□□□□ -1.43
SDHB-205ENST00000475506 SDF4Q9BRK5 362 aa6.1□□□□□ -1.43
SDHB-205ENST00000475506 PRKRIP1Q9H875 184 aaPredicted RBP6.1□□□□□ -1.43
SDHB-205ENST00000475506 DKK3Q9UBP4 350 aa6.1□□□□□ -1.43
SDHB-205ENST00000475506 DKK2Q9UBU2 259 aa6.1□□□□□ -1.43
SDHB-205ENST00000475506 SLC12A4Q9UP95 1085 aa6.1□□□□□ -1.43
SDHB-205ENST00000475506 PCDHB2Q9Y5E7 798 aa6.1□□□□□ -1.43
SDHB-205ENST00000475506 GAGE12BA1L429 117 aa6.09□□□□□ -1.43
SDHB-205ENST00000475506 GAGE12HA6NDE8 117 aa6.09□□□□□ -1.43
SDHB-205ENST00000475506 RNASET2O00584 256 aaKnown RBP6.09□□□□□ -1.43
SDHB-205ENST00000475506 SLC16A3O15427 465 aaKnown RBP6.09□□□□□ -1.43
SDHB-205ENST00000475506 SEPT4O43236 478 aa6.09□□□□□ -1.43
SDHB-205ENST00000475506 AHCYL1O43865 530 aa6.09□□□□□ -1.43
SDHB-205ENST00000475506 PRICKLE3O43900 615 aaPredicted RBP6.09□□□□□ -1.43
SDHB-205ENST00000475506 FAM20BO75063 409 aa6.09□□□□□ -1.43
SDHB-205ENST00000475506 ZNF623O75123 536 aa6.09□□□□□ -1.43
SDHB-205ENST00000475506 NDUFA10O95299 355 aa6.09□□□□□ -1.43
SDHB-205ENST00000475506 CYP3A4P08684 503 aa6.09□□□□□ -1.43
SDHB-205ENST00000475506 RRM1P23921 792 aa6.09□□□□□ -1.43
SDHB-205ENST00000475506 RGS2P41220 211 aa6.09□□□□□ -1.43
SDHB-205ENST00000475506 PNPLA4P41247 253 aa6.09□□□□□ -1.43
SDHB-205ENST00000475506 RAD52P43351 418 aa6.09□□□□□ -1.43
SDHB-205ENST00000475506 RCAN1P53805 252 aa6.09□□□□□ -1.43
SDHB-205ENST00000475506 CRHR2Q13324 411 aa6.09□□□□□ -1.43
SDHB-205ENST00000475506 FAM69AQ5T7M9 428 aa6.09□□□□□ -1.43
SDHB-205ENST00000475506 LIPMQ5VYY2 423 aa6.09□□□□□ -1.43
SDHB-205ENST00000475506 GALNT5Q7Z7M9 940 aa6.09□□□□□ -1.43
SDHB-205ENST00000475506 C1QL4Q86Z23 238 aa6.09□□□□□ -1.43
SDHB-205ENST00000475506 ANKRD44Q8N8A2 993 aa6.09□□□□□ -1.43
SDHB-205ENST00000475506 CPEB3Q8NE35 698 aaKnown RBP6.09□□□□□ -1.43
SDHB-205ENST00000475506 ARRDC3Q96B67 414 aa6.09□□□□□ -1.43
SDHB-205ENST00000475506 FAM89AQ96GI7 184 aa6.09□□□□□ -1.43
SDHB-205ENST00000475506 MASTLQ96GX5 879 aa6.09□□□□□ -1.43
SDHB-205ENST00000475506 PRR25Q96S07 402 aa6.09□□□□□ -1.43
SDHB-205ENST00000475506 PIGSQ96S52 555 aa6.09□□□□□ -1.43
SDHB-205ENST00000475506 DPCDQ9BVM2 203 aaPredicted RBP6.09□□□□□ -1.43
SDHB-205ENST00000475506 KLC2Q9H0B6 622 aa6.09□□□□□ -1.43
SDHB-205ENST00000475506 TTYH1Q9H313 450 aaPredicted RBP6.09□□□□□ -1.43
SDHB-205ENST00000475506 GHITMQ9H3K2 345 aa6.09□□□□□ -1.43
SDHB-205ENST00000475506 TDRD9Q8NDG6 1382 aaKnown RBP6.08□□□□□ -1.44
SDHB-205ENST00000475506 ADGRA2Q96PE1 1338 aa6.08□□□□□ -1.44
SDHB-205ENST00000475506 TBC1D3DA0A087WVF3 549 aa6.08□□□□□ -1.44
SDHB-205ENST00000475506 TBC1D3IA0A087WXS9 549 aa6.08□□□□□ -1.44
SDHB-205ENST00000475506 TBC1D3EA0A087X179 549 aa6.08□□□□□ -1.44
SDHB-205ENST00000475506 TBC1D3KA0A087X1G2 549 aa6.08□□□□□ -1.44
SDHB-205ENST00000475506 TBC1D3BA6NDS4 549 aa6.08□□□□□ -1.44
SDHB-205ENST00000475506 TBC1D3FA6NER0 549 aaPredicted RBP6.08□□□□□ -1.44
SDHB-205ENST00000475506 OTOL1A6NHN0 477 aaPredicted RBP6.08□□□□□ -1.44
SDHB-205ENST00000475506 FAM90A7PA6NKC0 464 aa6.08□□□□□ -1.44
SDHB-205ENST00000475506 FAM90A22PA8MWA6 464 aa6.08□□□□□ -1.44
SDHB-205ENST00000475506 FAM90A12PA8MX19 464 aa6.08□□□□□ -1.44
SDHB-205ENST00000475506 FAM90A23PA8MXZ1 464 aa6.08□□□□□ -1.44
SDHB-205ENST00000475506 TBC1D3LB9A6J9 549 aa6.08□□□□□ -1.44
SDHB-205ENST00000475506 HNRNPRO43390 633 aaKnown RBP6.08□□□□□ -1.44
SDHB-205ENST00000475506 PTP4A3O75365 173 aa6.08□□□□□ -1.44
SDHB-205ENST00000475506 PMPCBO75439 489 aa6.08□□□□□ -1.44
SDHB-205ENST00000475506 CDKL5O76039 1030 aa6.08□□□□□ -1.44
SDHB-205ENST00000475506 TBC1D3HP0C7X1 549 aa6.08□□□□□ -1.44
SDHB-205ENST00000475506 LYL1P12980 280 aa6.08□□□□□ -1.44
SDHB-205ENST00000475506 GKP32189 559 aa6.08□□□□□ -1.44
SDHB-205ENST00000475506 DGKQP52824 942 aa6.08□□□□□ -1.44
SDHB-205ENST00000475506 TAS2R50P59544 299 aa6.08□□□□□ -1.44
SDHB-205ENST00000475506 RPP30P78346 268 aaKnown RBP6.08□□□□□ -1.44
SDHB-205ENST00000475506 FZD5Q13467 585 aa6.08□□□□□ -1.44
SDHB-205ENST00000475506 DNASE1L3Q13609 305 aa6.08□□□□□ -1.44
SDHB-205ENST00000475506 ICAM4Q14773 271 aa6.08□□□□□ -1.44
SDHB-205ENST00000475506 SF3B3Q15393 1217 aaKnown RBP6.08□□□□□ -1.44
SDHB-205ENST00000475506 TBCCQ15814 346 aa6.08□□□□□ -1.44
SDHB-205ENST00000475506 NFIL3Q16649 462 aa6.08□□□□□ -1.44
SDHB-205ENST00000475506 ST3GAL2Q16842 350 aa6.08□□□□□ -1.44
SDHB-205ENST00000475506 FAM187BQ17R55 369 aa6.08□□□□□ -1.44
SDHB-205ENST00000475506 SPDYE7PQ495Y7 208 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms