RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 MAGEB3O15480 346 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 TLR2O60603 784 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 ATP2C2O75185 946 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 JRKO75564 520 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 WISP1O95388 367 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 POP4O95707 220 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 NPPAP01160 153 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 CYP1A1P04798 512 aaPredicted RBP6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 CYP17A1P05093 508 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 GSTM1P09488 218 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 DRD2P14416 443 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 ITGAXP20702 1163 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 KRT2P35908 639 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 ME1P48163 572 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 P2RX3P56373 397 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 KCNJ2P63252 427 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 GSTO1P78417 241 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 DSG1Q02413 1049 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 PPP2R5CQ13362 524 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 ZNF792Q3KQV3 632 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 FUT11Q495W5 492 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 GALNTL6Q49A17 601 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 AARS2Q5JTZ9 985 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 TTC22Q5TAA0 569 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 C12orf60Q5U649 245 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 OR7E24Q6IFN5 339 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 CXorf57Q6NSI4 855 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 RWDD4Q6NW29 188 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 PLBD1Q6P4A8 553 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 SPOCD1Q6ZMY3 1216 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 STOX1Q6ZVD7 989 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 TMTC3Q6ZXV5 915 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 FKBP9P1Q75LS8 142 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 RHOUQ7L0Q8 258 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 ASRGL1Q7L266 308 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 PEX26Q7Z412 305 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 RALYLQ86SE5 291 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 MTDHQ86UE4 582 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 KIF18BQ86Y91 864 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 TMTC1Q8IUR5 882 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 VSTM4Q8IW00 320 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 CDH26Q8IXH8 852 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 PALM2Q8IXS6 379 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 ALLCQ8N6M5 410 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 NKAIN3Q8N8D7 197 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 MFSD2AQ8NA29 543 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 OR8H1Q8NGG4 311 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 OR52K2Q8NGK3 314 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 DCAF4Q8WV16 495 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 MRPS27Q92552 414 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 SLC9A6Q92581 669 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 TIFAQ96CG3 184 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 SLC47A1Q96FL8 570 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 LTV1Q96GA3 475 aaPredicted RBP6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 TMEM237Q96Q45 408 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 PSD2Q9BQI7 771 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 ISCA1Q9BUE6 129 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 MENTQ9BUN1 341 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 ASCC2Q9H1I8 757 aaPredicted RBP6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 KCNN2Q9H2S1 579 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 SH2D4AQ9H788 454 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 TMEM206Q9H813 350 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 CD209Q9NNX6 404 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 NMRK1Q9NWW6 199 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 PAQR5Q9NXK6 330 aaPredicted RBP6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 STK32BQ9NY57 414 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 SLC12A6Q9UHW9 1150 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 ADGRE2Q9UHX3 823 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 DMTF1Q9Y222 760 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 EPN1Q9Y6I3 576 aaPredicted RBP6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 IQGAP3Q86VI3 1631 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 SETD1AO15047 1707 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 EIF4E1BA6NMX2 242 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 STX16-NPEPL1H3BU86 382 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 RBAK-RBAKDNI3L0D1 243 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 ZBTB14O43829 449 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 PEX11AO75192 247 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 LRIG2O94898 1065 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 MED26O95402 600 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 MT-CO1P00395 513 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 P4HA1P13674 534 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 PDCP20941 246 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 ACAT1P24752 427 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 GTF2H1P32780 548 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 GPD2P43304 727 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 PTPN9P43378 593 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 IFNAR2P48551 515 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 LIMK1P53667 647 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 AMPD2Q01433 879 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 OCA2Q04671 838 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 TGFBIQ15582 683 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 TSC22D1Q15714 1073 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 NPTX1Q15818 432 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 RGS21Q2M5E4 152 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 DPY19L1Q2PZI1 675 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 ATP13A4Q4VNC1 1196 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 KCNT1Q5JUK3 1230 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 AGBL2Q5U5Z8 902 aa6.2□□□□□ -1.42
ECHDC1-215ENST00000475319 SLFN13Q68D06 897 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms