RNA–Protein interactions for RNA: ENST00000474852.1

TPR-205, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 1 (best)

Gene TPR, Length 2,757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-205ENST00000474852 PCDH19Q8TAB3 1148 aa16.86■□□□□ 0.29
TPR-205ENST00000474852 MCRS1Q96EZ8 462 aa16.86■□□□□ 0.29
TPR-205ENST00000474852 SIGLEC10Q96LC7 697 aa16.86■□□□□ 0.29
TPR-205ENST00000474852 FAM210AQ96ND0 272 aa16.86■□□□□ 0.29
TPR-205ENST00000474852 STK32BQ9NY57 414 aa16.86■□□□□ 0.29
TPR-205ENST00000474852 CDH22Q9UJ99 828 aa16.86■□□□□ 0.29
TPR-205ENST00000474852 TPP1O14773 563 aa16.85■□□□□ 0.29
TPR-205ENST00000474852 CSDE1O75534 798 aaKnown RBP16.85■□□□□ 0.29
TPR-205ENST00000474852 GSRP00390 522 aa16.85■□□□□ 0.29
TPR-205ENST00000474852 VCLP18206 1134 aa16.85■□□□□ 0.29
TPR-205ENST00000474852 FAM183BPQ6ZVS7 135 aa16.85■□□□□ 0.29
TPR-205ENST00000474852 ZNF534Q76KX8 674 aa16.85■□□□□ 0.29
TPR-205ENST00000474852 GCNAQ96QF7 691 aa16.85■□□□□ 0.29
TPR-205ENST00000474852 EBNA1BP2Q99848 306 aaKnown RBP16.85■□□□□ 0.29
TPR-205ENST00000474852 CNPY3Q9BT09 278 aa16.85■□□□□ 0.29
TPR-205ENST00000474852 DNAJB4Q9UDY4 337 aa16.85■□□□□ 0.29
TPR-205ENST00000474852 ZNF214Q9UL59 606 aaPredicted RBP16.85■□□□□ 0.29
TPR-205ENST00000474852 EMCNQ9ULC0 261 aa16.85■□□□□ 0.29
TPR-205ENST00000474852 RPS6KL1Q9Y6S9 549 aa16.85■□□□□ 0.29
TPR-205ENST00000474852 LTBP4Q8N2S1 1624 aa16.85■□□□□ 0.29
TPR-205ENST00000474852 INO80B-WBP1J3KQ70 363 aa16.85■□□□□ 0.29
TPR-205ENST00000474852 ITGB3P05106 788 aa16.85■□□□□ 0.29
TPR-205ENST00000474852 NFICP08651 508 aa16.85■□□□□ 0.29
TPR-205ENST00000474852 FGF3P11487 239 aaPredicted RBP16.85■□□□□ 0.29
TPR-205ENST00000474852 UQCRBP14927 111 aa16.85■□□□□ 0.29
TPR-205ENST00000474852 GBE1Q04446 702 aa16.85■□□□□ 0.29
TPR-205ENST00000474852 PPM1JQ5JR12 505 aa16.85■□□□□ 0.29
TPR-205ENST00000474852 EEF1DP3Q658K8 133 aa16.85■□□□□ 0.29
TPR-205ENST00000474852 TRIM50Q86XT4 487 aa16.85■□□□□ 0.29
TPR-205ENST00000474852 C10orf107Q8IVU9 208 aa16.85■□□□□ 0.29
TPR-205ENST00000474852 ARHGAP18Q8N392 663 aa16.85■□□□□ 0.29
TPR-205ENST00000474852 PHTF2Q8N3S3 785 aa16.85■□□□□ 0.29
TPR-205ENST00000474852 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.85■□□□□ 0.29
TPR-205ENST00000474852 NLRP4Q96MN2 994 aa16.85■□□□□ 0.29
TPR-205ENST00000474852 PCYT2Q99447 389 aa16.85■□□□□ 0.29
TPR-205ENST00000474852 INO80BQ9C086 356 aaPredicted RBP16.85■□□□□ 0.29
TPR-205ENST00000474852 VCX3BQ9H321 246 aa16.85■□□□□ 0.29
TPR-205ENST00000474852 IFT122Q9HBG6 1241 aa16.85■□□□□ 0.29
TPR-205ENST00000474852 VCX3AQ9NNX9 186 aa16.85■□□□□ 0.29
TPR-205ENST00000474852 SIX4Q9UIU6 781 aa16.85■□□□□ 0.29
TPR-205ENST00000474852 WDR27A2RRH5 827 aa16.84■□□□□ 0.29
TPR-205ENST00000474852 FAM159BA6NKW6 160 aa16.84■□□□□ 0.29
TPR-205ENST00000474852 DCXO43602 365 aa16.84■□□□□ 0.29
TPR-205ENST00000474852 ARRB2P32121 409 aa16.84■□□□□ 0.29
TPR-205ENST00000474852 GPD2P43304 727 aa16.84■□□□□ 0.29
TPR-205ENST00000474852 SCNN1BP51168 640 aa16.84■□□□□ 0.29
TPR-205ENST00000474852 FRMD7Q6ZUT3 714 aa16.84■□□□□ 0.29
TPR-205ENST00000474852 ATXN7L3BQ96GX2 97 aa16.84■□□□□ 0.29
TPR-205ENST00000474852 PGLYRP2Q96PD5 576 aa16.84■□□□□ 0.29
TPR-205ENST00000474852 ZNF358Q9NW07 568 aa16.84■□□□□ 0.29
TPR-205ENST00000474852 BTBD7Q9P203 1132 aa16.84■□□□□ 0.29
TPR-205ENST00000474852 POMPQ9Y244 141 aa16.84■□□□□ 0.29
TPR-205ENST00000474852 COL11A1P12107 1806 aaPredicted RBP16.84■□□□□ 0.29
TPR-205ENST00000474852 CAPN8A6NHC0 703 aa16.84■□□□□ 0.29
TPR-205ENST00000474852 C2CD4BA6NLJ0 364 aa16.84■□□□□ 0.29
TPR-205ENST00000474852 BIRC5O15392 142 aa16.84■□□□□ 0.29
TPR-205ENST00000474852 ONECUT3O60422 494 aaPredicted RBP16.84■□□□□ 0.29
TPR-205ENST00000474852 ENDOD1O94919 500 aa16.84■□□□□ 0.29
TPR-205ENST00000474852 ALDOAP04075 364 aaKnown RBP16.84■□□□□ 0.29
TPR-205ENST00000474852 FKBP1CQ5VVH2 108 aa16.84■□□□□ 0.29
TPR-205ENST00000474852 PDPK2PQ6A1A2 396 aa16.84■□□□□ 0.29
TPR-205ENST00000474852 FBXL19Q6PCT2 694 aa16.84■□□□□ 0.29
TPR-205ENST00000474852 ARCQ7LC44 396 aa16.84■□□□□ 0.29
TPR-205ENST00000474852 KRT27Q7Z3Y8 459 aa16.84■□□□□ 0.29
TPR-205ENST00000474852 SESTD1Q86VW0 696 aa16.84■□□□□ 0.29
TPR-205ENST00000474852 MAP7D3Q8IWC1 876 aa16.84■□□□□ 0.29
TPR-205ENST00000474852 PPP1R16BQ96T49 567 aa16.84■□□□□ 0.29
TPR-205ENST00000474852 OXCT2Q9BYC2 517 aaPredicted RBP16.84■□□□□ 0.29
TPR-205ENST00000474852 RNPEPQ9H4A4 650 aa16.84■□□□□ 0.29
TPR-205ENST00000474852 PSAT1Q9Y617 370 aa16.84■□□□□ 0.29
TPR-205ENST00000474852 MGAMO43451 1857 aa16.84■□□□□ 0.29
TPR-205ENST00000474852 TRIP11Q15643 1979 aa16.84■□□□□ 0.29
TPR-205ENST00000474852 E9PBE3 544 aa16.83■□□□□ 0.29
TPR-205ENST00000474852 KLHL41O60662 606 aa16.83■□□□□ 0.29
TPR-205ENST00000474852 IDH3AP50213 366 aa16.83■□□□□ 0.29
TPR-205ENST00000474852 SESN2P58004 480 aaPredicted RBP16.83■□□□□ 0.29
TPR-205ENST00000474852 LAMTOR4Q0VGL1 99 aa16.83■□□□□ 0.29
TPR-205ENST00000474852 PDE1CQ14123 709 aaPredicted RBP16.83■□□□□ 0.29
TPR-205ENST00000474852 PDK3Q15120 406 aa16.83■□□□□ 0.29
TPR-205ENST00000474852 AAGABQ6PD74 315 aa16.83■□□□□ 0.29
TPR-205ENST00000474852 C12orf29Q8N999 325 aa16.83■□□□□ 0.29
TPR-205ENST00000474852 C1orf127Q8N9H9 656 aa16.83■□□□□ 0.29
TPR-205ENST00000474852 TMEM176AQ96HP8 235 aa16.83■□□□□ 0.29
TPR-205ENST00000474852 PPP1R36Q96LQ0 422 aa16.83■□□□□ 0.29
TPR-205ENST00000474852 CEP41Q9BYV8 373 aa16.83■□□□□ 0.29
TPR-205ENST00000474852 PCDH18Q9HCL0 1135 aa16.83■□□□□ 0.29
TPR-205ENST00000474852 CD1EP15812 388 aa16.83■□□□□ 0.28
TPR-205ENST00000474852 HSPA1LP34931 641 aa16.83■□□□□ 0.28
TPR-205ENST00000474852 STAT5BP51692 787 aa16.83■□□□□ 0.28
TPR-205ENST00000474852 TBL3Q12788 808 aaKnown RBP16.83■□□□□ 0.28
TPR-205ENST00000474852 HNRNPDQ14103 355 aaKnown RBP16.83■□□□□ 0.28
TPR-205ENST00000474852 SPATA24Q86W54 205 aa16.83■□□□□ 0.28
TPR-205ENST00000474852 NAT14Q8WUY8 206 aa16.83■□□□□ 0.28
TPR-205ENST00000474852 CLMNQ96JQ2 1002 aa16.83■□□□□ 0.28
TPR-205ENST00000474852 OLFM3Q96PB7 478 aa16.83■□□□□ 0.28
TPR-205ENST00000474852 SNRNP25Q9BV90 132 aaKnown RBP16.83■□□□□ 0.28
TPR-205ENST00000474852 ACSS2Q9NR19 701 aa16.83■□□□□ 0.28
TPR-205ENST00000474852 MKS1Q9NXB0 559 aa16.83■□□□□ 0.28
TPR-205ENST00000474852 COL4A5P29400 1685 aa16.83■□□□□ 0.28
TPR-205ENST00000474852 ADCY6O43306 1168 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms