RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 TPPPO94811 219 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 PLA2G4BP0C869 781 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 PCK1P35558 622 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 NEK2P51955 445 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 GCNT1Q02742 428 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 ZNF211Q13398 564 aaPredicted RBP4.24□□□□□ -1.73
USP16-205ENST00000474835 PDAP1Q13442 181 aaKnown RBP4.24□□□□□ -1.73
USP16-205ENST00000474835 C1orf141Q5JVX7 400 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 HS2ST1Q7LGA3 356 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 LILRB4Q8NHJ6 448 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 SDR42E1Q8WUS8 393 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 DLG3Q92796 817 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 GPKOWQ92917 476 aaPredicted RBP eCLIP4.24□□□□□ -1.737e-6■■■■■ 33.4
USP16-205ENST00000474835 C12orf43Q96C57 262 aaKnown RBP4.24□□□□□ -1.73
USP16-205ENST00000474835 NSMCE3Q96MG7 304 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 NTPCRQ9BSD7 190 aaKnown RBP4.24□□□□□ -1.73
USP16-205ENST00000474835 CCDC113Q9H0I3 377 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 AGPAT3Q9NRZ7 376 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.24□□□□□ -1.73
USP16-205ENST00000474835 FKBP14Q9NWM8 211 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 EIF3LQ9Y262 564 aaKnown RBP4.24□□□□□ -1.73
USP16-205ENST00000474835 DENND4AQ7Z401 1863 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 PCM1Q15154 2024 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 FAM237BA0A1B0GVD1 139 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 TCRBV7S3A2A0A539 114 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 CYP26A1O43174 497 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 SUPT7LO94864 414 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 POLR2EP19388 210 aaKnown RBP4.24□□□□□ -1.73
USP16-205ENST00000474835 GABRB2P47870 512 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 GSSP48637 474 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 DYNLL1P63167 89 aaKnown RBP4.24□□□□□ -1.73
USP16-205ENST00000474835 NFATC3Q12968 1075 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 PARP10Q53GL7 1025 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 RALGPS1Q5JS13 557 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 RAP1GAP2Q684P5 730 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 PRR23CQ6ZRP0 262 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 ENOSF1Q7L5Y1 443 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 BTLAQ7Z6A9 289 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 SLC51BQ86UW2 128 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 SLC7A5P1Q8MH63 180 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 TTC39CQ8N584 583 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 OR52E4Q8NGH9 312 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 HAUS1Q96CS2 278 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 SIGLEC10Q96LC7 697 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 GBP5Q96PP8 586 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 PKP2Q99959 881 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 SELENOSQ9BQE4 189 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 EBF4Q9BQW3 602 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 NACA2Q9H009 215 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 RMND5AQ9H871 391 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 C8orf4Q9NR00 106 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 NDE1Q9NXR1 346 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 HACD3Q9P035 362 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 GCNT4Q9P109 453 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 PAIP2BQ9ULR5 123 aaKnown RBP4.24□□□□□ -1.73
USP16-205ENST00000474835 SLC8A2Q9UPR5 921 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 CHMP2BQ9UQN3 213 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 NIP7Q9Y221 180 aaKnown RBP eCLIP4.24□□□□□ -1.73
USP16-205ENST00000474835 AP4B1Q9Y6B7 739 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 USP3Q9Y6I4 520 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 CSNK1G3Q9Y6M4 447 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 A3GALT2U3KPV4 340 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 TP53BP1Q12888 1972 aaPredicted RBP4.24□□□□□ -1.73
USP16-205ENST00000474835 hCG_1642624A0A1W2PR95 340 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 TMEM191CA6NGB0 347 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 C2orf71A6NGG8 1288 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 POTEMA6NI47 508 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 TRDMT1O14717 391 aaKnown RBP4.24□□□□□ -1.73
USP16-205ENST00000474835 CA12O43570 354 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 LGR5O75473 907 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 KCNK2O95069 426 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 KLHL2O95198 593 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 PROCP04070 461 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 TMEM191BP0C7N4 346 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 PGM1P36871 562 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 ALDH7A1P49419 539 aaKnown RBP4.24□□□□□ -1.73
USP16-205ENST00000474835 ASIC1P78348 528 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 OGDHQ02218 1023 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 MAMLD1Q13495 774 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 MED21Q13503 144 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 DLG2Q15700 870 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 INSCQ1MX18 579 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 YIF1BQ5BJH7 314 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 RINT1Q6NUQ1 792 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 LETMD1Q6P1Q0 360 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 RSBN1LQ6PCB5 846 aaPredicted RBP4.24□□□□□ -1.73
USP16-205ENST00000474835 ALKAL1Q6UXT8 129 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 CCDC117Q8IWD4 279 aaPredicted RBP4.24□□□□□ -1.73
USP16-205ENST00000474835 MCUQ8NE86 351 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 ACMSDQ8TDX5 336 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 PHF10Q8WUB8 498 aaKnown RBP4.24□□□□□ -1.73
USP16-205ENST00000474835 MUL1Q969V5 352 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 SH3YL1Q96HL8 342 aaPredicted RBP4.24□□□□□ -1.73
USP16-205ENST00000474835 C1orf74Q96LT6 269 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 TCF12Q99081 682 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 ACAD9Q9H845 621 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 JMJD4Q9H9V9 463 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 NPHS2Q9NP85 383 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 OSGIN1Q9UJX0 560 aa4.24□□□□□ -1.73
USP16-205ENST00000474835 MAGEB6P1A0A0J9YX57 407 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms