RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 ANKRD6Q9Y2G4 727 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 NLRP1Q9C000 1473 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 MTMR11A4FU01 709 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 B4E1Z4 1266 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 E7ENQ6 273 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 H0YJX3 145 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 MAP2K7O14733 419 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 FANCGO15287 622 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 TBX10O75333 385 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 SPAG6O75602 509 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 GGPS1O95749 300 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 CFBP00751 764 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 LTFP02788 710 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 NR2F1P10589 423 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 MAGEA11P43364 429 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 YWHAZP63104 245 aaKnown RBP3.61□□□□□ -1.83
UBR3-208ENST00000474426 ZMYND11Q15326 602 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 CHRNA6Q15825 494 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 KCNA10Q16322 511 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 SGSM1Q2NKQ1 1148 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 FLYWCH1Q4VC44 716 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 ODF2Q5BJF6 829 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 GNASQ5JWF2 1037 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 ADGRF1Q5T601 910 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 TMC5Q6UXY8 1006 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 BTLAQ7Z6A9 289 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 GPR149Q86SP6 731 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 ILDR1Q86SU0 546 aaPredicted RBP3.61□□□□□ -1.83
UBR3-208ENST00000474426 DENND6AQ8IWF6 608 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 MCEMP1Q8IX19 187 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 TCP11L2Q8N4U5 519 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 CEP112Q8N8E3 955 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 GALNT11Q8NCW6 608 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 GSTCDQ8NEC7 633 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 TPCN2Q8NHX9 752 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 PTERQ96BW5 349 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 LRRC39Q96DD0 335 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 SGF29Q96ES7 293 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 PDLIM5Q96HC4 596 aaKnown RBP3.61□□□□□ -1.83
UBR3-208ENST00000474426 ERO1AQ96HE7 468 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 FUBP3Q96I24 572 aaKnown RBP eCLIP3.61□□□□□ -1.832e-6■■■□□ 18.9
UBR3-208ENST00000474426 PANX2Q96RD6 677 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 SPXQ9BT56 116 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 CCDC28BQ9BUN5 200 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 IFIH1Q9BYX4 1025 aaKnown RBP3.61□□□□□ -1.83
UBR3-208ENST00000474426 SLC26A1Q9H2B4 701 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 DPH5Q9H2P9 285 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 KCNN2Q9H2S1 579 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 MID1IP1Q9NPA3 183 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 RMND1Q9NWS8 449 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 H2AFY2Q9P0M6 372 aaPredicted RBP3.61□□□□□ -1.83
UBR3-208ENST00000474426 LIMA1Q9UHB6 759 aaKnown RBP3.61□□□□□ -1.83
UBR3-208ENST00000474426 ZNHIT2Q9UHR6 403 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 RNF24Q9Y225 148 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 PCDHGB2Q9Y5G2 931 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 PCDHGA5Q9Y5G8 931 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 CCNB3Q8WWL7 1395 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 DNAJC25-GNG10A0A024R161 153 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 PTPDC1A2A3K4 754 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 WDR91A4D1P6 747 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 A8MXE2 369 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 OPLAHO14841 1288 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 TADA2AO75478 443 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 PRKD3O94806 890 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 STAU1O95793 577 aaKnown RBP3.6□□□□□ -1.83
UBR3-208ENST00000474426 ZBED1O96006 694 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 RHOQP17081 205 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 TUBG1P23258 451 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 PIK3CBP42338 1070 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 SLC1A1P43005 524 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 SLC9A3P48764 834 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 SLC11A1P49279 550 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 SLC7A2P52569 658 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 PRRX1P54821 245 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 PSMC6P62333 389 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 CHRNEQ04844 493 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 POLD3Q15054 466 aaPredicted RBP3.6□□□□□ -1.83
UBR3-208ENST00000474426 RPS6KA2Q15349 733 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 PFKFB4Q16877 469 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 RGS21Q2M5E4 152 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 CCDC58Q4VC31 144 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 MARCH8Q5T0T0 291 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 TMTC3Q6ZXV5 915 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 TRPM8Q7Z2W7 1104 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 CACNA2D3Q8IZS8 1091 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 TBC1D19Q8N5T2 526 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 EFCAB3Q8N7B9 438 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 RBBP8NLQ8NC74 664 aaPredicted RBP3.6□□□□□ -1.83
UBR3-208ENST00000474426 SCFD1Q8WVM8 642 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 DACT3Q96B18 629 aaPredicted RBP3.6□□□□□ -1.83
UBR3-208ENST00000474426 MTFMTQ96DP5 389 aaKnown RBP3.6□□□□□ -1.83
UBR3-208ENST00000474426 TBC1D32Q96NH3 1257 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 SH3GL2Q99962 352 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 RNF39Q9H2S5 420 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 TUBG2Q9NRH3 451 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 DNAJB4Q9UDY4 337 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 ATP6V1HQ9UI12 483 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 MINPP1Q9UNW1 487 aa3.6□□□□□ -1.83
UBR3-208ENST00000474426 SRPRBQ9Y5M8 271 aaKnown RBP3.6□□□□□ -1.83
UBR3-208ENST00000474426 FPGT-TNNI3KV9GXZ4 949 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms