RNA–Protein interactions for RNA: ENST00000474094.1

CD109-204, Transcript of CD109 molecule, humanhuman

TSL 3

Gene CD109, Length 341 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD109-204ENST00000474094 NTHL1P78549 312 aa3□□□□□ -1.93
CD109-204ENST00000474094 FAM189BP81408 668 aa3□□□□□ -1.93
CD109-204ENST00000474094 PPFIA1Q13136 1202 aa3□□□□□ -1.93
CD109-204ENST00000474094 SEMA3BQ13214 749 aa3□□□□□ -1.93
CD109-204ENST00000474094 SERINC3Q13530 473 aa3□□□□□ -1.93
CD109-204ENST00000474094 ELF2Q15723 593 aa3□□□□□ -1.93
CD109-204ENST00000474094 CCDC142Q17RM4 750 aa3□□□□□ -1.93
CD109-204ENST00000474094 CCDC96Q2M329 555 aa3□□□□□ -1.93
CD109-204ENST00000474094 KLHL40Q2TBA0 621 aa3□□□□□ -1.93
CD109-204ENST00000474094 KRTAP21-3Q3LHN1 58 aa3□□□□□ -1.93
CD109-204ENST00000474094 USH1GQ495M9 461 aa3□□□□□ -1.93
CD109-204ENST00000474094 ARHGEF16Q5VV41 709 aa3□□□□□ -1.93
CD109-204ENST00000474094 BTBD8Q5XKL5 378 aa3□□□□□ -1.93
CD109-204ENST00000474094 HIST2H2BCQ6DN03 193 aa3□□□□□ -1.93
CD109-204ENST00000474094 KCNV1Q6PIU1 500 aa3□□□□□ -1.93
CD109-204ENST00000474094 SPATA31D4Q6ZUB0 917 aa3□□□□□ -1.93
CD109-204ENST00000474094 USP53Q70EK8 1073 aa3□□□□□ -1.93
CD109-204ENST00000474094 GRASPQ7Z6J2 395 aaPredicted RBP3□□□□□ -1.93
CD109-204ENST00000474094 NT5DC4Q86YG4 428 aa3□□□□□ -1.93
CD109-204ENST00000474094 MARCH9Q86YJ5 346 aa3□□□□□ -1.93
CD109-204ENST00000474094 FMNL3Q8IVF7 1028 aa3□□□□□ -1.93
CD109-204ENST00000474094 RBM12BQ8IXT5 1001 aaKnown RBP3□□□□□ -1.93
CD109-204ENST00000474094 RNF169Q8NCN4 708 aa3□□□□□ -1.93
CD109-204ENST00000474094 WDR48Q8TAF3 677 aa3□□□□□ -1.93
CD109-204ENST00000474094 CFHR4Q92496 578 aa3□□□□□ -1.93
CD109-204ENST00000474094 DNASE1L2Q92874 299 aa3□□□□□ -1.93
CD109-204ENST00000474094 LPPQ93052 612 aa3□□□□□ -1.93
CD109-204ENST00000474094 CLIP3Q96DZ5 547 aa3□□□□□ -1.93
CD109-204ENST00000474094 IGSF21Q96ID5 467 aa3□□□□□ -1.93
CD109-204ENST00000474094 RMDN3Q96TC7 470 aa3□□□□□ -1.93
CD109-204ENST00000474094 BTBD2Q9BX70 525 aa3□□□□□ -1.93
CD109-204ENST00000474094 VN1R3Q9BXE9 311 aa3□□□□□ -1.93
CD109-204ENST00000474094 CELF4Q9BZC1 486 aaKnown RBP3□□□□□ -1.93
CD109-204ENST00000474094 LRRCC1Q9C099 1032 aa3□□□□□ -1.93
CD109-204ENST00000474094 GRPEL1Q9HAV7 217 aa3□□□□□ -1.93
CD109-204ENST00000474094 SLC39A2Q9NP94 309 aa3□□□□□ -1.93
CD109-204ENST00000474094 ARHGAP28Q9P2N2 729 aa3□□□□□ -1.93
CD109-204ENST00000474094 ARPP21Q9UBL0 812 aaPredicted RBP3□□□□□ -1.93
CD109-204ENST00000474094 DPP7Q9UHL4 492 aa3□□□□□ -1.93
CD109-204ENST00000474094 DBNLQ9UJU6 430 aaKnown RBP3□□□□□ -1.93
CD109-204ENST00000474094 ZNF215Q9UL58 517 aaPredicted RBP3□□□□□ -1.93
CD109-204ENST00000474094 ST3GAL5Q9UNP4 418 aa3□□□□□ -1.93
CD109-204ENST00000474094 GINS2Q9Y248 185 aa3□□□□□ -1.93
CD109-204ENST00000474094 INPP5FQ9Y2H2 1132 aa3□□□□□ -1.93
CD109-204ENST00000474094 REXO2Q9Y3B8 237 aaKnown RBP3□□□□□ -1.93
CD109-204ENST00000474094 NOC2LQ9Y3T9 749 aaKnown RBP3□□□□□ -1.93
CD109-204ENST00000474094 TELO2Q9Y4R8 837 aa3□□□□□ -1.93
CD109-204ENST00000474094 SLC4A4Q9Y6R1 1079 aa3□□□□□ -1.93
CD109-204ENST00000474094 TNRC6BQ9UPQ9 1833 aaKnown RBP3□□□□□ -1.93
CD109-204ENST00000474094 KNTC1P50748 2209 aa3□□□□□ -1.93
CD109-204ENST00000474094 BSNQ9UPA5 3926 aa3□□□□□ -1.93
CD109-204ENST00000474094 ICE1Q9Y2F5 2266 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 KDM3AQ9Y4C1 1321 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 CCDC163A0A0D9SF12 145 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 A0A1W2PQU0 124 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 MBLAC1A4D2B0 266 aaPredicted RBP2.99□□□□□ -1.93
CD109-204ENST00000474094 CAPN14A8MX76 684 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 TEX28O15482 410 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 SLC26A4O43511 780 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 EXTL3O43909 919 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 RAB11FIP3O75154 756 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 ECI2O75521 394 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 AKAP3O75969 853 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 MBD4O95243 580 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 BAG4O95429 457 aaKnown RBP2.99□□□□□ -1.93
CD109-204ENST00000474094 MBD3O95983 291 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 SOD2P04179 222 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 RPLP2P05387 115 aaKnown RBP2.99□□□□□ -1.93
CD109-204ENST00000474094 TSPY3P0CV98 308 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 TSPY8P0CW00 308 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 TGFB3P10600 412 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 XRCC6P12956 609 aaKnown RBP eCLIP2.99□□□□□ -1.93
CD109-204ENST00000474094 MYF5P13349 255 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 ATF4P18848 351 aaPredicted RBP2.99□□□□□ -1.93
CD109-204ENST00000474094 CCNE1P24864 410 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 LMO1P25800 156 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 MARK3P27448 753 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 PTGS2P35354 604 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 IL12RB1P42701 662 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 PDE1AP54750 535 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 AK2P54819 239 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 CXADRP78310 365 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 SP4Q02446 784 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 CCDC173Q0VFZ6 552 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 LMAN2Q12907 356 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 HNRNPDQ14103 355 aaKnown RBP2.99□□□□□ -1.93
CD109-204ENST00000474094 LRRC32Q14392 662 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 NOLC1Q14978 699 aaKnown RBP eCLIP2.99□□□□□ -1.93
CD109-204ENST00000474094 TRIP6Q15654 476 aaKnown RBP2.99□□□□□ -1.93
CD109-204ENST00000474094 GPR19Q15760 415 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 HSP90AB4PQ58FF6 505 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 TRIM61Q5EBN2 209 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 CLLU1OSQ5K130 101 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 MARCH8Q5T0T0 291 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 BTNL9Q6UXG8 535 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 ZNF627Q7L945 461 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 PALB2Q86YC2 1186 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 ZNF280BQ86YH2 543 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 D2HGDHQ8N465 521 aa2.99□□□□□ -1.93
CD109-204ENST00000474094 HDDC3Q8N4P3 179 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms