RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 TAF5Q15542 800 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 CLEC16AQ2KHT3 1053 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 TSR1Q2NL82 804 aaKnown RBP14.32□□□□□ -0.12
USF1-205ENST00000473969 TDRD12Q587J7 1177 aaKnown RBP14.32□□□□□ -0.12
USF1-205ENST00000473969 TMEM196Q5HYL7 178 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 SYPL2Q5VXT5 272 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 OLFML1Q6UWY5 402 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 MMS22LQ6ZRQ5 1243 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 SND1Q7KZF4 910 aaKnown RBP eCLIP14.32□□□□□ -0.12
USF1-205ENST00000473969 IRF2BP2Q7Z5L9 587 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 TAC4Q86UU9 113 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 VPS36Q86VN1 386 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 XYLT1Q86Y38 959 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 SLC30A5Q8TAD4 765 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 ADAM32Q8TC27 787 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 CHFRQ96EP1 664 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 SLC2A13Q96QE2 648 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 PNKPQ96T60 521 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 C11orf70Q9BRQ4 267 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 TMEM51Q9NW97 253 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.32□□□□□ -0.12
USF1-205ENST00000473969 ADAM22Q9P0K1 906 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 DEC1Q9P2X7 70 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 BZW2Q9Y6E2 419 aaKnown RBP14.32□□□□□ -0.12
USF1-205ENST00000473969 HELZP42694 1942 aaKnown RBP14.32□□□□□ -0.12
USF1-205ENST00000473969 SYNJ2BP-COX16A0A087WUM0 186 aa14.31□□□□□ -0.12
USF1-205ENST00000473969 TYW5A2RUC4 315 aaKnown RBP14.31□□□□□ -0.12
USF1-205ENST00000473969 SHISA7A6NL88 538 aa14.31□□□□□ -0.12
USF1-205ENST00000473969 TYRP14679 529 aa14.31□□□□□ -0.12
USF1-205ENST00000473969 ABCB4P21439 1286 aa14.31□□□□□ -0.12
USF1-205ENST00000473969 MMP8P22894 467 aa14.31□□□□□ -0.12
USF1-205ENST00000473969 MATKP42679 507 aa14.31□□□□□ -0.12
USF1-205ENST00000473969 MTA1Q13330 715 aa14.31□□□□□ -0.12
USF1-205ENST00000473969 ADGRF1Q5T601 910 aa14.31□□□□□ -0.12
USF1-205ENST00000473969 SPECC1LQ69YQ0 1117 aa14.31□□□□□ -0.12
USF1-205ENST00000473969 CPXM2Q8N436 756 aa14.31□□□□□ -0.12
USF1-205ENST00000473969 NAT16Q8N8M0 369 aa14.31□□□□□ -0.12
USF1-205ENST00000473969 ATP6V0D2Q8N8Y2 350 aa14.31□□□□□ -0.12
USF1-205ENST00000473969 DDI1Q8WTU0 396 aa14.31□□□□□ -0.12
USF1-205ENST00000473969 SYN2Q92777 582 aaPredicted RBP14.31□□□□□ -0.12
USF1-205ENST00000473969 BHMTQ93088 406 aa14.31□□□□□ -0.12
USF1-205ENST00000473969 PIWIL1Q96J94 861 aaKnown RBP14.31□□□□□ -0.12
USF1-205ENST00000473969 TRIM5Q9C035 493 aa14.31□□□□□ -0.12
USF1-205ENST00000473969 TTYH3Q9C0H2 523 aa14.31□□□□□ -0.12
USF1-205ENST00000473969 HAUS4Q9H6D7 363 aa14.31□□□□□ -0.12
USF1-205ENST00000473969 ARHGEF4Q9NR80 690 aa14.31□□□□□ -0.12
USF1-205ENST00000473969 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.31□□□□□ -0.12
USF1-205ENST00000473969 DDIT4Q9NX09 232 aa14.31□□□□□ -0.12
USF1-205ENST00000473969 COX16Q9P0S2 106 aa14.31□□□□□ -0.12
USF1-205ENST00000473969 CAPN11Q9UMQ6 739 aa14.31□□□□□ -0.12
USF1-205ENST00000473969 PAXBP1Q9Y5B6 917 aa14.31□□□□□ -0.12
USF1-205ENST00000473969 ITIH6Q6UXX5 1313 aa14.31□□□□□ -0.12
USF1-205ENST00000473969 ANKRD62A6NC57 917 aa14.3□□□□□ -0.12
USF1-205ENST00000473969 TBC1D3BA6NDS4 549 aa14.3□□□□□ -0.12
USF1-205ENST00000473969 M0QYT0 321 aa14.3□□□□□ -0.12
USF1-205ENST00000473969 IRAK2O43187 625 aa14.3□□□□□ -0.12
USF1-205ENST00000473969 ACSL4O60488 711 aa14.3□□□□□ -0.12
USF1-205ENST00000473969 ATG13O75143 517 aa14.3□□□□□ -0.12
USF1-205ENST00000473969 MOCS2O96007 188 aaPredicted RBP14.3□□□□□ -0.12
USF1-205ENST00000473969 F9P00740 461 aa14.3□□□□□ -0.12
USF1-205ENST00000473969 EGFP01133 1207 aa14.3□□□□□ -0.12
USF1-205ENST00000473969 UNGP13051 313 aaPredicted RBP14.3□□□□□ -0.12
USF1-205ENST00000473969 DESP17661 470 aa14.3□□□□□ -0.12
USF1-205ENST00000473969 CCR1P32246 355 aa14.3□□□□□ -0.12
USF1-205ENST00000473969 OPRD1P41143 372 aa14.3□□□□□ -0.12
USF1-205ENST00000473969 GRIA2P42262 883 aa14.3□□□□□ -0.12
USF1-205ENST00000473969 SLC6A11P48066 632 aa14.3□□□□□ -0.12
USF1-205ENST00000473969 PTPN5P54829 565 aa14.3□□□□□ -0.12
USF1-205ENST00000473969 CENPCQ03188 943 aa14.3□□□□□ -0.12
USF1-205ENST00000473969 NME3Q13232 169 aa14.3□□□□□ -0.12
USF1-205ENST00000473969 CCINQ13939 588 aa14.3□□□□□ -0.12
USF1-205ENST00000473969 MPPE1Q53F39 396 aa14.3□□□□□ -0.12
USF1-205ENST00000473969 C2CD6Q53TS8 623 aa14.3□□□□□ -0.12
USF1-205ENST00000473969 GRAMD4Q6IC98 578 aa14.3□□□□□ -0.12
USF1-205ENST00000473969 FSTL4Q6MZW2 842 aa14.3□□□□□ -0.12
USF1-205ENST00000473969 PHF13Q86YI8 300 aaPredicted RBP14.3□□□□□ -0.12
USF1-205ENST00000473969 C1orf210Q8IVY1 113 aa14.3□□□□□ -0.12
USF1-205ENST00000473969 CCDC117Q8IWD4 279 aaPredicted RBP14.3□□□□□ -0.12
USF1-205ENST00000473969 AZIN2Q96A70 460 aa14.3□□□□□ -0.12
USF1-205ENST00000473969 TMA16Q96EY4 203 aaKnown RBP14.3□□□□□ -0.12
USF1-205ENST00000473969 PCDHB18PQ96TA0 734 aa14.3□□□□□ -0.12
USF1-205ENST00000473969 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.3□□□□□ -0.12
USF1-205ENST00000473969 SELENOOQ9BVL4 669 aa14.3□□□□□ -0.12
USF1-205ENST00000473969 CHRDQ9H2X0 955 aa14.3□□□□□ -0.12
USF1-205ENST00000473969 RBM12Q9NTZ6 932 aaKnown RBP14.3□□□□□ -0.12
USF1-205ENST00000473969 DNAJC17Q9NVM6 304 aaKnown RBP14.3□□□□□ -0.12
USF1-205ENST00000473969 ZNHIT6Q9NWK9 470 aaKnown RBP14.3□□□□□ -0.12
USF1-205ENST00000473969 MARK1Q9P0L2 795 aa14.3□□□□□ -0.12
USF1-205ENST00000473969 DLGAP2Q9P1A6 1054 aa14.3□□□□□ -0.12
USF1-205ENST00000473969 TSPAN3O60637 253 aa14.29□□□□□ -0.12
USF1-205ENST00000473969 TULP3O75386 442 aa14.29□□□□□ -0.12
USF1-205ENST00000473969 KAT7O95251 611 aa14.29□□□□□ -0.12
USF1-205ENST00000473969 IGLV3-27P01718 113 aa14.29□□□□□ -0.12
USF1-205ENST00000473969 SKILP12757 684 aa14.29□□□□□ -0.12
USF1-205ENST00000473969 CASP14P31944 242 aa14.29□□□□□ -0.12
USF1-205ENST00000473969 PRKCIP41743 596 aa14.29□□□□□ -0.12
USF1-205ENST00000473969 SULT1E1P49888 294 aa14.29□□□□□ -0.12
USF1-205ENST00000473969 CCR3P51677 355 aa14.29□□□□□ -0.12
USF1-205ENST00000473969 KDSRQ06136 332 aa14.29□□□□□ -0.12
USF1-205ENST00000473969 C1QBPQ07021 282 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms