RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 KANSL1LA0AUZ9 987 aa12.92□□□□□ -0.34
DDX56-209ENST00000473924 PRR33A8MZF0 331 aa12.92□□□□□ -0.34
DDX56-209ENST00000473924 M0QYT0 321 aa12.92□□□□□ -0.34
DDX56-209ENST00000473924 IRAK2O43187 625 aa12.92□□□□□ -0.34
DDX56-209ENST00000473924 ADCY5O95622 1261 aa12.92□□□□□ -0.34
DDX56-209ENST00000473924 APOEP02649 317 aa12.92□□□□□ -0.34
DDX56-209ENST00000473924 KLKB1P03952 638 aa12.92□□□□□ -0.34
DDX56-209ENST00000473924 CYP17A1P05093 508 aa12.92□□□□□ -0.34
DDX56-209ENST00000473924 ADH5P11766 374 aa12.92□□□□□ -0.34
DDX56-209ENST00000473924 CTHP32929 405 aa12.92□□□□□ -0.34
DDX56-209ENST00000473924 GJA4P35212 333 aa12.92□□□□□ -0.34
DDX56-209ENST00000473924 CHKAP35790 457 aa12.92□□□□□ -0.34
DDX56-209ENST00000473924 FLT3P36888 993 aa12.92□□□□□ -0.34
DDX56-209ENST00000473924 EIF4A3P38919 411 aaKnown RBP12.92□□□□□ -0.34
DDX56-209ENST00000473924 SLC11A2P49281 568 aa12.92□□□□□ -0.34
DDX56-209ENST00000473924 PITX1P78337 314 aaPredicted RBP12.92□□□□□ -0.34
DDX56-209ENST00000473924 GAD2Q05329 585 aa12.92□□□□□ -0.34
DDX56-209ENST00000473924 ARID5BQ14865 1188 aa12.92□□□□□ -0.34
DDX56-209ENST00000473924 UBXN2BQ14CS0 331 aa12.92□□□□□ -0.34
DDX56-209ENST00000473924 DNAJC24Q6P3W2 148 aa12.92□□□□□ -0.34
DDX56-209ENST00000473924 RHBDF2Q6PJF5 856 aa12.92□□□□□ -0.34
DDX56-209ENST00000473924 TPGS1Q6ZTW0 290 aa12.92□□□□□ -0.34
DDX56-209ENST00000473924 SND1Q7KZF4 910 aaKnown RBP eCLIP12.92□□□□□ -0.34
DDX56-209ENST00000473924 SUGP1Q8IWZ8 645 aaKnown RBP12.92□□□□□ -0.34
DDX56-209ENST00000473924 C3orf20Q8ND61 904 aa12.92□□□□□ -0.34
DDX56-209ENST00000473924 OLIG1Q8TAK6 271 aa12.92□□□□□ -0.34
DDX56-209ENST00000473924 TRIM11Q96F44 468 aa12.92□□□□□ -0.34
DDX56-209ENST00000473924 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.92□□□□□ -0.34
DDX56-209ENST00000473924 SLC12A6Q9UHW9 1150 aa12.92□□□□□ -0.34
DDX56-209ENST00000473924 TMEM59LQ9UK28 342 aa12.92□□□□□ -0.34
DDX56-209ENST00000473924 NDRG2Q9UN36 371 aaKnown RBP12.92□□□□□ -0.34
DDX56-209ENST00000473924 MUC3AQ02505 3323 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 COL4A2P08572 1712 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 CUL9Q8IWT3 2517 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 A0A087X0T9 212 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 SIGLEC16A6NMB1 481 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 AKR1B10O60218 316 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 GJB6O95452 261 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 LATS1O95835 1130 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 MOCS2O96007 188 aaPredicted RBP12.91□□□□□ -0.34
DDX56-209ENST00000473924 IGLV3-27P01718 113 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 FAM228BP0C875 321 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 SLC2A3P11169 496 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 PDGFRAP16234 1089 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 ABCB4P21439 1286 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 RRM1P23921 792 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 SDC4P31431 198 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 VCPP55072 806 aaKnown RBP12.91□□□□□ -0.34
DDX56-209ENST00000473924 GSCP56915 257 aaPredicted RBP12.91□□□□□ -0.34
DDX56-209ENST00000473924 DEUP1Q05D60 604 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 SLC25A52Q3SY17 297 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 ZC3H12AQ5D1E8 599 aaKnown RBP12.91□□□□□ -0.34
DDX56-209ENST00000473924 CCDC122Q5T0U0 273 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 DCUN1D2Q6PH85 259 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 WDR59Q6PJI9 974 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 ARCQ7LC44 396 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 BMP8AQ7Z5Y6 402 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 DNAAF5Q86Y56 855 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 TMEM25Q86YD3 366 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 FBXL6Q8N531 539 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 EMC1Q8N766 993 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 ATP6V0D2Q8N8Y2 350 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 RXFP2Q8WXD0 754 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 ZNF653Q96CK0 615 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 SLC39A13Q96H72 371 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 FCRL2Q96LA5 508 aaPredicted RBP12.91□□□□□ -0.34
DDX56-209ENST00000473924 CCDC42Q96M95 316 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 CFAP57Q96MR6 1250 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 NELL2Q99435 816 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 NPY6RQ99463 290 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 DDX23Q9BUQ8 820 aaKnown RBP12.91□□□□□ -0.34
DDX56-209ENST00000473924 BBS2Q9BXC9 721 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 FOXQ1Q9C009 403 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 LTB4R2Q9NPC1 389 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 C11orf16Q9NQ32 467 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 PARVAQ9NVD7 372 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 TECTAO75443 2155 aa12.91□□□□□ -0.34
DDX56-209ENST00000473924 SSU72P8A0A1W2PR75 194 aa12.9□□□□□ -0.34
DDX56-209ENST00000473924 FAM170BA6NMN3 283 aa12.9□□□□□ -0.34
DDX56-209ENST00000473924 NEDD8-MDP1E9PL57 170 aa12.9□□□□□ -0.34
DDX56-209ENST00000473924 NCAM2O15394 837 aa12.9□□□□□ -0.34
DDX56-209ENST00000473924 ACSL4O60488 711 aa12.9□□□□□ -0.34
DDX56-209ENST00000473924 F9P00740 461 aa12.9□□□□□ -0.34
DDX56-209ENST00000473924 IGLV3-25P01717 112 aa12.9□□□□□ -0.34
DDX56-209ENST00000473924 CYBBP04839 570 aa12.9□□□□□ -0.34
DDX56-209ENST00000473924 MYBL1P10243 752 aa12.9□□□□□ -0.34
DDX56-209ENST00000473924 DESP17661 470 aa12.9□□□□□ -0.34
DDX56-209ENST00000473924 CCR1P32246 355 aa12.9□□□□□ -0.34
DDX56-209ENST00000473924 RFC1P35251 1148 aaPredicted RBP12.9□□□□□ -0.34
DDX56-209ENST00000473924 ATP11AP98196 1134 aa12.9□□□□□ -0.34
DDX56-209ENST00000473924 GFPT1Q06210 699 aaPredicted RBP12.9□□□□□ -0.34
DDX56-209ENST00000473924 PON2Q15165 354 aa12.9□□□□□ -0.34
DDX56-209ENST00000473924 ADGRF1Q5T601 910 aa12.9□□□□□ -0.34
DDX56-209ENST00000473924 ASTLQ6HA08 431 aaPredicted RBP12.9□□□□□ -0.34
DDX56-209ENST00000473924 ALKBH5Q6P6C2 394 aaKnown RBP12.9□□□□□ -0.34
DDX56-209ENST00000473924 TXNDC11Q6PKC3 985 aa12.9□□□□□ -0.34
DDX56-209ENST00000473924 PJA1Q8NG27 643 aa12.9□□□□□ -0.34
DDX56-209ENST00000473924 JOSD2Q8TAC2 188 aa12.9□□□□□ -0.34
DDX56-209ENST00000473924 BHMTQ93088 406 aa12.9□□□□□ -0.34
DDX56-209ENST00000473924 MCEEQ96PE7 176 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms