RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 TP53INP2Q8IXH6 220 aa18.67■□□□□ 0.58
VARS2-206ENST00000473916 FAM76AQ8TAV0 307 aa18.67■□□□□ 0.58
VARS2-206ENST00000473916 DQX1Q8TE96 717 aaKnown RBP18.67■□□□□ 0.58
VARS2-206ENST00000473916 RBM15Q96T37 977 aaKnown RBP eCLIP18.67■□□□□ 0.58
VARS2-206ENST00000473916 PNPLA8Q9NP80 782 aa18.67■□□□□ 0.58
VARS2-206ENST00000473916 DTLQ9NZJ0 730 aa18.67■□□□□ 0.58
VARS2-206ENST00000473916 BCCIPQ9P287 314 aaKnown RBP eCLIP18.67■□□□□ 0.58
VARS2-206ENST00000473916 MYO18AQ92614 2054 aaKnown RBP18.67■□□□□ 0.58
VARS2-206ENST00000473916 NUP205Q92621 2012 aa18.66■□□□□ 0.58
VARS2-206ENST00000473916 MFSD11O43934 449 aa18.66■□□□□ 0.58
VARS2-206ENST00000473916 TMEM63AO94886 807 aa18.66■□□□□ 0.58
VARS2-206ENST00000473916 ITGB8P26012 769 aa18.66■□□□□ 0.58
VARS2-206ENST00000473916 SLCO1A2P46721 670 aa18.66■□□□□ 0.58
VARS2-206ENST00000473916 SCD5Q86SK9 330 aa18.66■□□□□ 0.58
VARS2-206ENST00000473916 DCP1BQ8IZD4 617 aaKnown RBP18.66■□□□□ 0.58
VARS2-206ENST00000473916 IRGQQ8WZA9 623 aa18.66■□□□□ 0.58
VARS2-206ENST00000473916 TOX2Q96NM4 488 aa18.66■□□□□ 0.58
VARS2-206ENST00000473916 COLEC11Q9BWP8 271 aa18.66■□□□□ 0.58
VARS2-206ENST00000473916 CRISPLD1Q9H336 500 aa18.66■□□□□ 0.58
VARS2-206ENST00000473916 NMUR1Q9HB89 426 aa18.66■□□□□ 0.58
VARS2-206ENST00000473916 FBXW11Q9UKB1 542 aa18.66■□□□□ 0.58
VARS2-206ENST00000473916 GREB1Q4ZG55 1949 aa18.66■□□□□ 0.58
VARS2-206ENST00000473916 VNN2O95498 520 aa18.66■□□□□ 0.58
VARS2-206ENST00000473916 ARL4AP40617 200 aa18.66■□□□□ 0.58
VARS2-206ENST00000473916 YWHAGP61981 247 aaKnown RBP eCLIP18.66■□□□□ 0.58
VARS2-206ENST00000473916 USP46P62068 366 aa18.66■□□□□ 0.58
VARS2-206ENST00000473916 MORF4L2Q15014 288 aa18.66■□□□□ 0.58
VARS2-206ENST00000473916 EFHC2Q5JST6 749 aa18.66■□□□□ 0.58
VARS2-206ENST00000473916 PRSS55Q6UWB4 352 aaPredicted RBP18.66■□□□□ 0.58
VARS2-206ENST00000473916 TRMT10CQ7L0Y3 403 aaKnown RBP18.66■□□□□ 0.58
VARS2-206ENST00000473916 SAYSD1Q9NPB0 183 aa18.66■□□□□ 0.58
VARS2-206ENST00000473916 OSER1Q9NX31 292 aa18.66■□□□□ 0.58
VARS2-206ENST00000473916 SLC27A5Q9Y2P5 690 aa18.66■□□□□ 0.58
VARS2-206ENST00000473916 SF3B1O75533 1304 aaKnown RBP eCLIP18.65■□□□□ 0.58
VARS2-206ENST00000473916 TLDC2A0PJX2 215 aa18.65■□□□□ 0.58
VARS2-206ENST00000473916 GOLGA6L10A6NI86 522 aa18.65■□□□□ 0.58
VARS2-206ENST00000473916 MSI1O43347 362 aaKnown RBP18.65■□□□□ 0.58
VARS2-206ENST00000473916 TTC4O95801 387 aa18.65■□□□□ 0.58
VARS2-206ENST00000473916 BASP1P80723 227 aaKnown RBP18.65■□□□□ 0.58
VARS2-206ENST00000473916 LRRC26Q2I0M4 334 aa18.65■□□□□ 0.58
VARS2-206ENST00000473916 FAXCQ5TGI0 409 aa18.65■□□□□ 0.58
VARS2-206ENST00000473916 KCNT2Q6UVM3 1135 aa18.65■□□□□ 0.58
VARS2-206ENST00000473916 NAT8LQ8N9F0 302 aa18.65■□□□□ 0.58
VARS2-206ENST00000473916 PGAP3Q96FM1 320 aaPredicted RBP18.65■□□□□ 0.58
VARS2-206ENST00000473916 TMEM39AQ9NV64 488 aa18.65■□□□□ 0.58
VARS2-206ENST00000473916 SFMBT1Q9UHJ3 866 aa18.65■□□□□ 0.58
VARS2-206ENST00000473916 LTBP2Q14767 1821 aa18.65■□□□□ 0.58
VARS2-206ENST00000473916 ATP1A2P50993 1020 aa18.64■□□□□ 0.58
VARS2-206ENST00000473916 DPYSQ14117 519 aa18.64■□□□□ 0.58
VARS2-206ENST00000473916 MSS51Q4VC12 460 aa18.64■□□□□ 0.58
VARS2-206ENST00000473916 ZNF280DQ6N043 979 aa18.64■□□□□ 0.58
VARS2-206ENST00000473916 PSTKQ8IV42 348 aaKnown RBP18.64■□□□□ 0.58
VARS2-206ENST00000473916 SCML4Q8N228 414 aa18.64■□□□□ 0.58
VARS2-206ENST00000473916 CCDC110Q8TBZ0 833 aa18.64■□□□□ 0.58
VARS2-206ENST00000473916 TKTL2Q9H0I9 626 aa18.64■□□□□ 0.58
VARS2-206ENST00000473916 SHOC2Q9UQ13 582 aa18.64■□□□□ 0.58
VARS2-206ENST00000473916 SHROOM3Q8TF72 1996 aa18.64■□□□□ 0.57
VARS2-206ENST00000473916 A0A1W2PQH9 124 aa18.64■□□□□ 0.57
VARS2-206ENST00000473916 EEF2KO00418 725 aaKnown RBP18.64■□□□□ 0.57
VARS2-206ENST00000473916 HOXA2O43364 376 aa18.64■□□□□ 0.57
VARS2-206ENST00000473916 VAV1P15498 845 aa18.64■□□□□ 0.57
VARS2-206ENST00000473916 MAGEA4P43358 317 aa18.64■□□□□ 0.57
VARS2-206ENST00000473916 LMAN1P49257 510 aa18.64■□□□□ 0.57
VARS2-206ENST00000473916 CXCR3P49682 368 aa18.64■□□□□ 0.57
VARS2-206ENST00000473916 EIF3BP55884 814 aaKnown RBP18.64■□□□□ 0.57
VARS2-206ENST00000473916 SCAPQ12770 1279 aa18.64■□□□□ 0.57
VARS2-206ENST00000473916 SEMA3BQ13214 749 aa18.64■□□□□ 0.57
VARS2-206ENST00000473916 FNBP1LQ5T0N5 605 aa18.64■□□□□ 0.57
VARS2-206ENST00000473916 TTC19Q6DKK2 380 aaPredicted RBP18.64■□□□□ 0.57
VARS2-206ENST00000473916 FAM117BQ6P1L5 589 aa18.64■□□□□ 0.57
VARS2-206ENST00000473916 RNF19BQ6ZMZ0 732 aa18.64■□□□□ 0.57
VARS2-206ENST00000473916 RFX8Q6ZV50 586 aa18.64■□□□□ 0.57
VARS2-206ENST00000473916 PPIL6Q8IXY8 311 aa18.64■□□□□ 0.57
VARS2-206ENST00000473916 LRRC43Q8N309 656 aa18.64■□□□□ 0.57
VARS2-206ENST00000473916 EXOC4Q96A65 974 aa18.64■□□□□ 0.57
VARS2-206ENST00000473916 NTAN1Q96AB6 310 aa18.64■□□□□ 0.57
VARS2-206ENST00000473916 PAWRQ96IZ0 340 aaKnown RBP18.64■□□□□ 0.57
VARS2-206ENST00000473916 LGMNQ99538 433 aa18.64■□□□□ 0.57
VARS2-206ENST00000473916 VN1R3Q9BXE9 311 aa18.64■□□□□ 0.57
VARS2-206ENST00000473916 MRPL9Q9BYD2 267 aaKnown RBP18.64■□□□□ 0.57
VARS2-206ENST00000473916 NOVA2Q9UNW9 492 aaKnown RBP18.64■□□□□ 0.57
VARS2-206ENST00000473916 PCDHB5Q9Y5E4 795 aa18.64■□□□□ 0.57
VARS2-206ENST00000473916 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.64■□□□□ 0.57
VARS2-206ENST00000473916 BCLAF3A2AJT9 711 aaKnown RBP18.63■□□□□ 0.57
VARS2-206ENST00000473916 H3BRJ5 948 aa18.63■□□□□ 0.57
VARS2-206ENST00000473916 ADAM12O43184 909 aa18.63■□□□□ 0.57
VARS2-206ENST00000473916 IGLV3-25P01717 112 aa18.63■□□□□ 0.57
VARS2-206ENST00000473916 CPB1P15086 417 aa18.63■□□□□ 0.57
VARS2-206ENST00000473916 RPL17P18621 184 aaKnown RBP18.63■□□□□ 0.57
VARS2-206ENST00000473916 STIP1P31948 543 aaKnown RBP18.63■□□□□ 0.57
VARS2-206ENST00000473916 HPDP32754 393 aaPredicted RBP18.63■□□□□ 0.57
VARS2-206ENST00000473916 NFE2Q16621 373 aaPredicted RBP18.63■□□□□ 0.57
VARS2-206ENST00000473916 LONRF1Q17RB8 773 aa18.63■□□□□ 0.57
VARS2-206ENST00000473916 CAPN12Q6ZSI9 719 aa18.63■□□□□ 0.57
VARS2-206ENST00000473916 CCDC13Q8IYE1 715 aa18.63■□□□□ 0.57
VARS2-206ENST00000473916 CASP10Q92851 521 aa18.63■□□□□ 0.57
VARS2-206ENST00000473916 RTP4Q96DX8 246 aa18.63■□□□□ 0.57
VARS2-206ENST00000473916 OLFM3Q96PB7 478 aa18.63■□□□□ 0.57
VARS2-206ENST00000473916 SLC9A7Q96T83 725 aa18.63■□□□□ 0.57
VARS2-206ENST00000473916 WDR83Q9BRX9 315 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms