RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 PCDHGA8Q9Y5G5 932 aa2.38□□□□□ -2.03
CCDC39-203ENST00000473854 PCDHGA7Q9Y5G6 932 aa2.38□□□□□ -2.03
CCDC39-203ENST00000473854 PCDHGA6Q9Y5G7 932 aa2.38□□□□□ -2.03
CCDC39-203ENST00000473854 PCDHGA3Q9Y5H0 932 aa2.38□□□□□ -2.03
CCDC39-203ENST00000473854 CDY1Q9Y6F8 540 aa2.38□□□□□ -2.03
CCDC39-203ENST00000473854 WDR81Q562E7 1941 aa2.38□□□□□ -2.03
CCDC39-203ENST00000473854 SHROOM4Q9ULL8 1493 aa2.38□□□□□ -2.03
CCDC39-203ENST00000473854 DPPA5A6NC42 116 aa2.37□□□□□ -2.03
CCDC39-203ENST00000473854 TTC34A8MYJ7 566 aa2.37□□□□□ -2.03
CCDC39-203ENST00000473854 SPRY3O43610 288 aa2.37□□□□□ -2.03
CCDC39-203ENST00000473854 RGS10O43665 173 aa2.37□□□□□ -2.03
CCDC39-203ENST00000473854 BUB3O43684 328 aa2.37□□□□□ -2.03
CCDC39-203ENST00000473854 F7P08709 466 aaPredicted RBP2.37□□□□□ -2.03
CCDC39-203ENST00000473854 MYBL2P10244 700 aa2.37□□□□□ -2.03
CCDC39-203ENST00000473854 PDCP20941 246 aa2.37□□□□□ -2.03
CCDC39-203ENST00000473854 GATMP50440 423 aa2.37□□□□□ -2.03
CCDC39-203ENST00000473854 EEF1A2Q05639 463 aaKnown RBP2.37□□□□□ -2.03
CCDC39-203ENST00000473854 CNGA3Q16281 694 aa2.37□□□□□ -2.03
CCDC39-203ENST00000473854 TTLL5Q6EMB2 1281 aa2.37□□□□□ -2.03
CCDC39-203ENST00000473854 ZNF783Q6ZMS7 281 aa2.37□□□□□ -2.03
CCDC39-203ENST00000473854 ARMC9Q7Z3E5 817 aa2.37□□□□□ -2.03
CCDC39-203ENST00000473854 TFAP2DQ7Z6R9 452 aa2.37□□□□□ -2.03
CCDC39-203ENST00000473854 CLMNQ96JQ2 1002 aa2.37□□□□□ -2.03
CCDC39-203ENST00000473854 ERVK-5Q9HDB9 667 aa2.37□□□□□ -2.03
CCDC39-203ENST00000473854 MLXIPLQ9NP71 852 aa2.37□□□□□ -2.03
CCDC39-203ENST00000473854 XPNPEP3Q9NQH7 507 aa2.37□□□□□ -2.03
CCDC39-203ENST00000473854 SLC5A4Q9NY91 659 aa2.37□□□□□ -2.03
CCDC39-203ENST00000473854 FZD10Q9ULW2 581 aa2.37□□□□□ -2.03
CCDC39-203ENST00000473854 PCDHA6Q9UN73 950 aa2.37□□□□□ -2.03
CCDC39-203ENST00000473854 DTX4Q9Y2E6 619 aa2.37□□□□□ -2.03
CCDC39-203ENST00000473854 HEMK1Q9Y5R4 338 aaPredicted RBP2.37□□□□□ -2.03
CCDC39-203ENST00000473854 SMAD5-AS1Q9Y6J3 95 aa2.37□□□□□ -2.03
CCDC39-203ENST00000473854 NACADO15069 1562 aa2.36□□□□□ -2.03
CCDC39-203ENST00000473854 BMPR1BO00238 502 aa2.36□□□□□ -2.03
CCDC39-203ENST00000473854 CCP110O43303 1012 aa2.36□□□□□ -2.03
CCDC39-203ENST00000473854 SLC3A2P08195 630 aaKnown RBP2.36□□□□□ -2.03
CCDC39-203ENST00000473854 SNRNP70P08621 437 aaKnown RBP2.36□□□□□ -2.03
CCDC39-203ENST00000473854 CHRNB1P11230 501 aa2.36□□□□□ -2.03
CCDC39-203ENST00000473854 GLIPR1P48060 266 aa2.36□□□□□ -2.03
CCDC39-203ENST00000473854 RASSF2P50749 326 aa2.36□□□□□ -2.03
CCDC39-203ENST00000473854 PGDP52209 483 aa2.36□□□□□ -2.03
CCDC39-203ENST00000473854 ACSM2AQ08AH3 577 aa2.36□□□□□ -2.03
CCDC39-203ENST00000473854 RAB32Q13637 225 aa2.36□□□□□ -2.03
CCDC39-203ENST00000473854 KIF19Q2TAC6 998 aa2.36□□□□□ -2.03
CCDC39-203ENST00000473854 GLE1Q53GS7 698 aaKnown RBP2.36□□□□□ -2.03
CCDC39-203ENST00000473854 OTUD1Q5VV17 481 aaPredicted RBP2.36□□□□□ -2.03
CCDC39-203ENST00000473854 EGFLAMQ63HQ2 1017 aa2.36□□□□□ -2.03
CCDC39-203ENST00000473854 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.36□□□□□ -2.03
CCDC39-203ENST00000473854 USP45Q70EL2 814 aa2.36□□□□□ -2.03
CCDC39-203ENST00000473854 KRT26Q7Z3Y9 468 aa2.36□□□□□ -2.03
CCDC39-203ENST00000473854 PRR18Q8N4B5 295 aa2.36□□□□□ -2.03
CCDC39-203ENST00000473854 ZNF485Q8NCK3 441 aa2.36□□□□□ -2.03
CCDC39-203ENST00000473854 PPP1R9BQ96SB3 815 aa2.36□□□□□ -2.03
CCDC39-203ENST00000473854 EPYCQ99645 322 aa2.36□□□□□ -2.03
CCDC39-203ENST00000473854 TTLL2Q9BWV7 592 aa2.36□□□□□ -2.03
CCDC39-203ENST00000473854 ISCUQ9H1K1 167 aa2.36□□□□□ -2.03
CCDC39-203ENST00000473854 DDX31Q9H8H2 851 aaKnown RBP2.36□□□□□ -2.03
CCDC39-203ENST00000473854 PLAC1Q9HBJ0 212 aa2.36□□□□□ -2.03
CCDC39-203ENST00000473854 A6NNC1 897 aa2.35□□□□□ -2.03
CCDC39-203ENST00000473854 PRAMEF2O60811 474 aa2.35□□□□□ -2.03
CCDC39-203ENST00000473854 RASAL1O95294 804 aa2.35□□□□□ -2.03
CCDC39-203ENST00000473854 TBX6O95947 436 aaPredicted RBP2.35□□□□□ -2.03
CCDC39-203ENST00000473854 CYP1A2P05177 515 aa2.35□□□□□ -2.03
CCDC39-203ENST00000473854 MASP1P48740 699 aa2.35□□□□□ -2.03
CCDC39-203ENST00000473854 CLCN5P51795 746 aa2.35□□□□□ -2.03
CCDC39-203ENST00000473854 EIF4A1P60842 406 aaKnown RBP2.35□□□□□ -2.03
CCDC39-203ENST00000473854 DEUP1Q05D60 604 aa2.35□□□□□ -2.03
CCDC39-203ENST00000473854 CLCA4Q14CN2 919 aa2.35□□□□□ -2.03
CCDC39-203ENST00000473854 Q5PR19 223 aa2.35□□□□□ -2.03
CCDC39-203ENST00000473854 SYDE2Q5VT97 1194 aa2.35□□□□□ -2.03
CCDC39-203ENST00000473854 CACHD1Q5VU97 1274 aa2.35□□□□□ -2.03
CCDC39-203ENST00000473854 DCUN1D3Q8IWE4 304 aa2.35□□□□□ -2.03
CCDC39-203ENST00000473854 CHPFQ8IZ52 775 aa2.35□□□□□ -2.03
CCDC39-203ENST00000473854 WDSUB1Q8N9V3 476 aa2.35□□□□□ -2.03
CCDC39-203ENST00000473854 LMNTD1Q8N9Z9 388 aa2.35□□□□□ -2.03
CCDC39-203ENST00000473854 OR6B3Q8NGW1 331 aa2.35□□□□□ -2.03
CCDC39-203ENST00000473854 KBTBD7Q8WVZ9 684 aa2.35□□□□□ -2.03
CCDC39-203ENST00000473854 RAPGEF4Q8WZA2 1011 aa2.35□□□□□ -2.03
CCDC39-203ENST00000473854 INPP5DQ92835 1189 aa2.35□□□□□ -2.03
CCDC39-203ENST00000473854 IGSF21Q96ID5 467 aa2.35□□□□□ -2.03
CCDC39-203ENST00000473854 DRC1Q96MC2 740 aa2.35□□□□□ -2.03
CCDC39-203ENST00000473854 DUX3Q96PT4 197 aa2.35□□□□□ -2.03
CCDC39-203ENST00000473854 TMX1Q9H3N1 280 aa2.35□□□□□ -2.03
CCDC39-203ENST00000473854 ASAP1Q9ULH1 1129 aa2.35□□□□□ -2.03
CCDC39-203ENST00000473854 SPATA31A5Q5VU36 1347 aa2.35□□□□□ -2.03
CCDC39-203ENST00000473854 SPATA31A7Q8IWB4 1347 aa2.35□□□□□ -2.03
CCDC39-203ENST00000473854 RB1CC1Q8TDY2 1594 aa2.35□□□□□ -2.03
CCDC39-203ENST00000473854 INAFM1C9JVW0 142 aa2.34□□□□□ -2.03
CCDC39-203ENST00000473854 SGPL1O95470 568 aa2.34□□□□□ -2.03
CCDC39-203ENST00000473854 ZBTB11O95625 1053 aaPredicted RBP2.34□□□□□ -2.03
CCDC39-203ENST00000473854 VIL1P09327 827 aaKnown RBP2.34□□□□□ -2.03
CCDC39-203ENST00000473854 TMIGD3P0DMS9 266 aaPredicted RBP2.34□□□□□ -2.03
CCDC39-203ENST00000473854 AKR1A1P14550 325 aa2.34□□□□□ -2.03
CCDC39-203ENST00000473854 GALNSP34059 522 aa2.34□□□□□ -2.03
CCDC39-203ENST00000473854 IDUAP35475 653 aa2.34□□□□□ -2.03
CCDC39-203ENST00000473854 FCN2Q15485 313 aa2.34□□□□□ -2.03
CCDC39-203ENST00000473854 SLC1A5Q15758 541 aa2.34□□□□□ -2.03
CCDC39-203ENST00000473854 HLFQ16534 295 aa2.34□□□□□ -2.03
CCDC39-203ENST00000473854 PGS1Q32NB8 556 aa2.34□□□□□ -2.03
CCDC39-203ENST00000473854 DNTTIP2Q5QJE6 756 aaKnown RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms