RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 CHPFQ8IZ52 775 aa12.03□□□□□ -0.48
CPNE1-222ENST00000473373 CLEC4CQ8WTT0 213 aa12.03□□□□□ -0.48
CPNE1-222ENST00000473373 HMGB4Q8WW32 186 aa12.03□□□□□ -0.48
CPNE1-222ENST00000473373 RNF34Q969K3 372 aa12.03□□□□□ -0.48
CPNE1-222ENST00000473373 ERLEC1Q96DZ1 483 aa12.03□□□□□ -0.48
CPNE1-222ENST00000473373 SPACA7Q96KW9 195 aa12.03□□□□□ -0.48
CPNE1-222ENST00000473373 MED15Q96RN5 788 aa12.03□□□□□ -0.48
CPNE1-222ENST00000473373 NAT10Q9H0A0 1025 aaKnown RBP12.03□□□□□ -0.48
CPNE1-222ENST00000473373 OTOGLQ3ZCN5 2332 aa12.02□□□□□ -0.49
CPNE1-222ENST00000473373 SYNJ2BP-COX16A0A087WUM0 186 aa12.02□□□□□ -0.49
CPNE1-222ENST00000473373 TCRBV21S2A2A0A5A6 115 aa12.02□□□□□ -0.49
CPNE1-222ENST00000473373 E5RJQ4 531 aa12.02□□□□□ -0.49
CPNE1-222ENST00000473373 MAP3K13O43283 966 aa12.02□□□□□ -0.49
CPNE1-222ENST00000473373 HRO43593 1189 aa12.02□□□□□ -0.49
CPNE1-222ENST00000473373 CACNG3O60359 315 aa12.02□□□□□ -0.49
CPNE1-222ENST00000473373 MOCS2O96007 188 aaPredicted RBP12.02□□□□□ -0.49
CPNE1-222ENST00000473373 APOEP02649 317 aa12.02□□□□□ -0.49
CPNE1-222ENST00000473373 TDGF1P13385 188 aa12.02□□□□□ -0.49
CPNE1-222ENST00000473373 HOXB2P14652 356 aa12.02□□□□□ -0.49
CPNE1-222ENST00000473373 SLC11A2P49281 568 aa12.02□□□□□ -0.49
CPNE1-222ENST00000473373 GAB4Q2WGN9 574 aa12.02□□□□□ -0.49
CPNE1-222ENST00000473373 MPPE1Q53F39 396 aa12.02□□□□□ -0.49
CPNE1-222ENST00000473373 EMC10Q5UCC4 262 aa12.02□□□□□ -0.49
CPNE1-222ENST00000473373 NUGGCQ68CJ6 796 aa12.02□□□□□ -0.49
CPNE1-222ENST00000473373 OR6B2Q6IFH4 312 aa12.02□□□□□ -0.49
CPNE1-222ENST00000473373 Q6ZNB5 142 aa12.02□□□□□ -0.49
CPNE1-222ENST00000473373 CACNA2D4Q7Z3S7 1137 aa12.02□□□□□ -0.49
CPNE1-222ENST00000473373 SFTPA1Q8IWL2 248 aa12.02□□□□□ -0.49
CPNE1-222ENST00000473373 SCML4Q8N228 414 aa12.02□□□□□ -0.49
CPNE1-222ENST00000473373 GPR161Q8N6U8 529 aaKnown RBP12.02□□□□□ -0.49
CPNE1-222ENST00000473373 ENOX1Q8TC92 643 aaKnown RBP12.02□□□□□ -0.49
CPNE1-222ENST00000473373 GAB3Q8WWW8 586 aa12.02□□□□□ -0.49
CPNE1-222ENST00000473373 SHC3Q92529 594 aa12.02□□□□□ -0.49
CPNE1-222ENST00000473373 EZH1Q92800 747 aaPredicted RBP12.02□□□□□ -0.49
CPNE1-222ENST00000473373 NELL1Q92832 810 aa12.02□□□□□ -0.49
CPNE1-222ENST00000473373 SERPINB11Q96P15 392 aa12.02□□□□□ -0.49
CPNE1-222ENST00000473373 DDX50Q9BQ39 737 aaKnown RBP12.02□□□□□ -0.49
CPNE1-222ENST00000473373 ZSWIM1Q9BR11 485 aa12.02□□□□□ -0.49
CPNE1-222ENST00000473373 ACP6Q9NPH0 428 aa12.02□□□□□ -0.49
CPNE1-222ENST00000473373 COX16Q9P0S2 106 aa12.02□□□□□ -0.49
CPNE1-222ENST00000473373 CDV3Q9UKY7 258 aaKnown RBP12.02□□□□□ -0.49
CPNE1-222ENST00000473373 AGO1Q9UL18 857 aaKnown RBP12.02□□□□□ -0.49
CPNE1-222ENST00000473373 INVSQ9Y283 1065 aa12.02□□□□□ -0.49
CPNE1-222ENST00000473373 ABCA7Q8IZY2 2146 aa12.02□□□□□ -0.49
CPNE1-222ENST00000473373 CCDC163A0A0D9SF12 145 aa12.01□□□□□ -0.49
CPNE1-222ENST00000473373 TRIM24O15164 1050 aa12.01□□□□□ -0.49
CPNE1-222ENST00000473373 RHOBTB1O94844 696 aa12.01□□□□□ -0.49
CPNE1-222ENST00000473373 KLKB1P03952 638 aa12.01□□□□□ -0.49
CPNE1-222ENST00000473373 PNMA6AP0CW24 399 aaPredicted RBP12.01□□□□□ -0.49
CPNE1-222ENST00000473373 SDHBP21912 280 aa12.01□□□□□ -0.49
CPNE1-222ENST00000473373 NTSR1P30989 418 aa12.01□□□□□ -0.49
CPNE1-222ENST00000473373 HOXA6P31267 233 aa12.01□□□□□ -0.49
CPNE1-222ENST00000473373 HOXC13P31276 330 aa12.01□□□□□ -0.49
CPNE1-222ENST00000473373 GPD2P43304 727 aa12.01□□□□□ -0.49
CPNE1-222ENST00000473373 ZNF445P59923 1031 aa12.01□□□□□ -0.49
CPNE1-222ENST00000473373 MYL5Q02045 173 aa12.01□□□□□ -0.49
CPNE1-222ENST00000473373 SPEM2Q0P670 501 aa12.01□□□□□ -0.49
CPNE1-222ENST00000473373 DRAP1Q14919 205 aaPredicted RBP12.01□□□□□ -0.49
CPNE1-222ENST00000473373 E2F5Q15329 346 aa12.01□□□□□ -0.49
CPNE1-222ENST00000473373 TRIP4Q15650 581 aaPredicted RBP12.01□□□□□ -0.49
CPNE1-222ENST00000473373 CRY1Q16526 586 aa12.01□□□□□ -0.49
CPNE1-222ENST00000473373 MIIPQ5JXC2 388 aa12.01□□□□□ -0.49
CPNE1-222ENST00000473373 C11orf57Q6ZUT1 292 aaPredicted RBP12.01□□□□□ -0.49
CPNE1-222ENST00000473373 TOGARAM2Q6ZUX3 1019 aa12.01□□□□□ -0.49
CPNE1-222ENST00000473373 ANKS1BQ7Z6G8 1248 aa12.01□□□□□ -0.49
CPNE1-222ENST00000473373 ETFBKMTQ8IXQ9 262 aa12.01□□□□□ -0.49
CPNE1-222ENST00000473373 IL17RCQ8NAC3 791 aa12.01□□□□□ -0.49
CPNE1-222ENST00000473373 MSANTD4Q8NCY6 345 aa12.01□□□□□ -0.49
CPNE1-222ENST00000473373 TMA16Q96EY4 203 aaKnown RBP12.01□□□□□ -0.49
CPNE1-222ENST00000473373 PPP1R13BQ96KQ4 1090 aa12.01□□□□□ -0.49
CPNE1-222ENST00000473373 SPAG5Q96R06 1193 aa12.01□□□□□ -0.49
CPNE1-222ENST00000473373 CIPCQ9C0C6 399 aa12.01□□□□□ -0.49
CPNE1-222ENST00000473373 FAM204AQ9H8W3 233 aa12.01□□□□□ -0.49
CPNE1-222ENST00000473373 PARD6AQ9NPB6 346 aa12.01□□□□□ -0.49
CPNE1-222ENST00000473373 MARK1Q9P0L2 795 aa12.01□□□□□ -0.49
CPNE1-222ENST00000473373 SLC12A6Q9UHW9 1150 aa12.01□□□□□ -0.49
CPNE1-222ENST00000473373 CNTN6Q9UQ52 1028 aa12.01□□□□□ -0.49
CPNE1-222ENST00000473373 FHOD1Q9Y613 1164 aa12.01□□□□□ -0.49
CPNE1-222ENST00000473373 CEP250Q9BV73 2442 aa12□□□□□ -0.49
CPNE1-222ENST00000473373 FAM170AA1A519 330 aa12□□□□□ -0.49
CPNE1-222ENST00000473373 BECN2A8MW95 431 aa12□□□□□ -0.49
CPNE1-222ENST00000473373 PRR5-ARHGAP8B1AHC4 643 aa12□□□□□ -0.49
CPNE1-222ENST00000473373 SGK1O00141 431 aa12□□□□□ -0.49
CPNE1-222ENST00000473373 FOXN3O00409 490 aaPredicted RBP12□□□□□ -0.49
CPNE1-222ENST00000473373 RETP07949 1114 aa12□□□□□ -0.49
CPNE1-222ENST00000473373 TGM1P22735 817 aa12□□□□□ -0.49
CPNE1-222ENST00000473373 ARHGAP8P85298 464 aa12□□□□□ -0.49
CPNE1-222ENST00000473373 LMNB2Q03252 620 aa12□□□□□ -0.49
CPNE1-222ENST00000473373 MESP2Q0VG99 397 aa12□□□□□ -0.49
CPNE1-222ENST00000473373 PDCLQ13371 301 aa12□□□□□ -0.49
CPNE1-222ENST00000473373 BYSLQ13895 437 aaKnown RBP12□□□□□ -0.49
CPNE1-222ENST00000473373 STARD3Q14849 445 aa12□□□□□ -0.49
CPNE1-222ENST00000473373 KRT31Q15323 416 aa12□□□□□ -0.49
CPNE1-222ENST00000473373 SYCP1Q15431 976 aa12□□□□□ -0.49
CPNE1-222ENST00000473373 MEA1Q16626 185 aa12□□□□□ -0.49
CPNE1-222ENST00000473373 DCAF6Q58WW2 860 aa12□□□□□ -0.49
CPNE1-222ENST00000473373 TAF3Q5VWG9 929 aa12□□□□□ -0.49
CPNE1-222ENST00000473373 EGFLAMQ63HQ2 1017 aa12□□□□□ -0.49
CPNE1-222ENST00000473373 CAVIN1Q6NZI2 390 aaKnown RBP12□□□□□ -0.49
CPNE1-222ENST00000473373 SLC47A2Q86VL8 602 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms