RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 FAM57BQ71RH2 274 aa4.48□□□□□ -1.69
RBM39-228ENST00000471635 MEPCEQ7L2J0 689 aaKnown RBP4.48□□□□□ -1.69
RBM39-228ENST00000471635 C14orf80Q86SX3 495 aa4.48□□□□□ -1.69
RBM39-228ENST00000471635 TSR2Q969E8 191 aaKnown RBP4.48□□□□□ -1.69
RBM39-228ENST00000471635 IQCDQ96DY2 449 aa4.48□□□□□ -1.69
RBM39-228ENST00000471635 LRRC46Q96FV0 321 aa4.48□□□□□ -1.69
RBM39-228ENST00000471635 NLRP4Q96MN2 994 aa4.48□□□□□ -1.69
RBM39-228ENST00000471635 OBP2AQ9NY56 170 aa4.48□□□□□ -1.69
RBM39-228ENST00000471635 LRP12Q9Y561 859 aa4.48□□□□□ -1.69
RBM39-228ENST00000471635 A0A087WZ62 844 aa4.47□□□□□ -1.69
RBM39-228ENST00000471635 IGLV5-39A0A0G2JS06 123 aa4.47□□□□□ -1.69
RBM39-228ENST00000471635 THAP12O43422 761 aa4.47□□□□□ -1.69
RBM39-228ENST00000471635 ARP10275 920 aa4.47□□□□□ -1.69
RBM39-228ENST00000471635 KRT10P13645 584 aa4.47□□□□□ -1.69
RBM39-228ENST00000471635 RPL17P18621 184 aaKnown RBP4.47□□□□□ -1.69
RBM39-228ENST00000471635 TNFRSF1BP20333 461 aa4.47□□□□□ -1.69
RBM39-228ENST00000471635 RPS6KB1P23443 525 aa4.47□□□□□ -1.69
RBM39-228ENST00000471635 IDUAP35475 653 aa4.47□□□□□ -1.69
RBM39-228ENST00000471635 SLC12A2P55011 1212 aa4.47□□□□□ -1.69
RBM39-228ENST00000471635 GAB1Q13480 694 aa4.47□□□□□ -1.69
RBM39-228ENST00000471635 BFSP2Q13515 415 aa4.47□□□□□ -1.69
RBM39-228ENST00000471635 DAG1Q14118 895 aa4.47□□□□□ -1.69
RBM39-228ENST00000471635 MANEAQ5SRI9 462 aa4.47□□□□□ -1.69
RBM39-228ENST00000471635 DAB2IPQ5VWQ8 1189 aa4.47□□□□□ -1.69
RBM39-228ENST00000471635 CRTC1Q6UUV9 634 aa4.47□□□□□ -1.69
RBM39-228ENST00000471635 RBM44Q6ZP01 1051 aaKnown RBP4.47□□□□□ -1.69
RBM39-228ENST00000471635 ADGRF4Q8IZF3 695 aa4.47□□□□□ -1.69
RBM39-228ENST00000471635 SLC25A28Q96A46 364 aa4.47□□□□□ -1.69
RBM39-228ENST00000471635 UNKQ9C0B0 810 aaKnown RBP4.47□□□□□ -1.69
RBM39-228ENST00000471635 NUP62CLQ9H1M0 184 aa4.47□□□□□ -1.69
RBM39-228ENST00000471635 PNPLA8Q9NP80 782 aa4.47□□□□□ -1.69
RBM39-228ENST00000471635 SEMA4BQ9NPR2 832 aaPredicted RBP4.47□□□□□ -1.69
RBM39-228ENST00000471635 ASNSD1Q9NWL6 643 aa4.47□□□□□ -1.69
RBM39-228ENST00000471635 COG5Q9UP83 839 aa4.47□□□□□ -1.69
RBM39-228ENST00000471635 TCF20Q9UGU0 1960 aaKnown RBP4.47□□□□□ -1.69
RBM39-228ENST00000471635 FAM90A8PA6NJQ4 464 aa4.46□□□□□ -1.7
RBM39-228ENST00000471635 RHPN2P1A8MT19 583 aa4.46□□□□□ -1.7
RBM39-228ENST00000471635 CCNT2O60583 730 aaKnown RBP4.46□□□□□ -1.7
RBM39-228ENST00000471635 USP12O75317 370 aa4.46□□□□□ -1.7
RBM39-228ENST00000471635 SLC3A2P08195 630 aaKnown RBP4.46□□□□□ -1.7
RBM39-228ENST00000471635 FAM90A13PP0C7W8 464 aa4.46□□□□□ -1.7
RBM39-228ENST00000471635 FAM90A24PP0C7X0 464 aa4.46□□□□□ -1.7
RBM39-228ENST00000471635 KCNJ12Q14500 433 aa4.46□□□□□ -1.7
RBM39-228ENST00000471635 SEMA3AQ14563 771 aa4.46□□□□□ -1.7
RBM39-228ENST00000471635 ABLIM2Q6H8Q1 611 aa4.46□□□□□ -1.7
RBM39-228ENST00000471635 KRT28Q7Z3Y7 464 aa4.46□□□□□ -1.7
RBM39-228ENST00000471635 UEVLDQ8IX04 471 aa4.46□□□□□ -1.7
RBM39-228ENST00000471635 PELI3Q8N2H9 469 aa4.46□□□□□ -1.7
RBM39-228ENST00000471635 ABHD5Q8WTS1 349 aa4.46□□□□□ -1.7
RBM39-228ENST00000471635 AKAP1Q92667 903 aaKnown RBP eCLIP4.46□□□□□ -1.7
RBM39-228ENST00000471635 PHKBQ93100 1093 aa4.46□□□□□ -1.7
RBM39-228ENST00000471635 LYZL4Q96KX0 146 aa4.46□□□□□ -1.7
RBM39-228ENST00000471635 CAMK1GQ96NX5 476 aa4.46□□□□□ -1.7
RBM39-228ENST00000471635 HIPK2Q9H2X6 1198 aa4.46□□□□□ -1.7
RBM39-228ENST00000471635 MOV10Q9HCE1 1003 aaKnown RBP4.46□□□□□ -1.7
RBM39-228ENST00000471635 PRDM11Q9NQV5 511 aa4.46□□□□□ -1.7
RBM39-228ENST00000471635 A0A1W2PPC1 479 aa4.45□□□□□ -1.7
RBM39-228ENST00000471635 TTC34A8MYJ7 566 aa4.45□□□□□ -1.7
RBM39-228ENST00000471635 F8W810 466 aa4.45□□□□□ -1.7
RBM39-228ENST00000471635 PRYO14603 147 aa4.45□□□□□ -1.7
RBM39-228ENST00000471635 UGDHO60701 494 aa4.45□□□□□ -1.7
RBM39-228ENST00000471635 CBFA2T3O75081 653 aa4.45□□□□□ -1.7
RBM39-228ENST00000471635 COQ9O75208 318 aa4.45□□□□□ -1.7
RBM39-228ENST00000471635 IL18RAPO95256 599 aa4.45□□□□□ -1.7
RBM39-228ENST00000471635 SYF2O95926 243 aaKnown RBP4.45□□□□□ -1.7
RBM39-228ENST00000471635 ATF3P18847 181 aa4.45□□□□□ -1.7
RBM39-228ENST00000471635 NDUFS1P28331 727 aa4.45□□□□□ -1.7
RBM39-228ENST00000471635 DUSP1P28562 367 aa4.45□□□□□ -1.7
RBM39-228ENST00000471635 IGHMBP2P38935 993 aaKnown RBP4.45□□□□□ -1.7
RBM39-228ENST00000471635 IL6STP40189 918 aaPredicted RBP4.45□□□□□ -1.7
RBM39-228ENST00000471635 CDKN2AP42771 156 aaKnown RBP4.45□□□□□ -1.7
RBM39-228ENST00000471635 PRTGQ2VWP7 1150 aa4.45□□□□□ -1.7
RBM39-228ENST00000471635 TMEM196Q5HYL7 178 aa4.45□□□□□ -1.7
RBM39-228ENST00000471635 FAXCQ5TGI0 409 aa4.45□□□□□ -1.7
RBM39-228ENST00000471635 KLHDC7AQ5VTJ3 777 aa4.45□□□□□ -1.7
RBM39-228ENST00000471635 LVRNQ6Q4G3 990 aa4.45□□□□□ -1.7
RBM39-228ENST00000471635 TTC8Q8TAM2 541 aa4.45□□□□□ -1.7
RBM39-228ENST00000471635 BCAS4Q8TDM0 211 aa4.45□□□□□ -1.7
RBM39-228ENST00000471635 CELF1Q92879 486 aaKnown RBP4.45□□□□□ -1.7
RBM39-228ENST00000471635 TIFAQ96CG3 184 aa4.45□□□□□ -1.7
RBM39-228ENST00000471635 WDR24Q96S15 920 aa4.45□□□□□ -1.7
RBM39-228ENST00000471635 SENP7Q9BQF6 1050 aa4.45□□□□□ -1.7
RBM39-228ENST00000471635 TUBB6Q9BUF5 446 aa4.45□□□□□ -1.7
RBM39-228ENST00000471635 RNF26Q9BY78 433 aaPredicted RBP4.45□□□□□ -1.7
RBM39-228ENST00000471635 VPS33BQ9H267 617 aa4.45□□□□□ -1.7
RBM39-228ENST00000471635 ZBTB26Q9HCK0 441 aa4.45□□□□□ -1.7
RBM39-228ENST00000471635 WWOXQ9NZC7 414 aa4.45□□□□□ -1.7
RBM39-228ENST00000471635 MSRB1Q9NZV6 116 aa4.45□□□□□ -1.7
RBM39-228ENST00000471635 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.44□□□□□ -1.7
RBM39-228ENST00000471635 ERVV-2B6SEH9 535 aa4.44□□□□□ -1.7
RBM39-228ENST00000471635 ZNF814B7Z6K7 855 aa4.44□□□□□ -1.7
RBM39-228ENST00000471635 SMAD6O43541 496 aaKnown RBP4.44□□□□□ -1.7
RBM39-228ENST00000471635 PQBP1O60828 265 aaKnown RBP4.44□□□□□ -1.7
RBM39-228ENST00000471635 NDUFB8O95169 186 aa4.44□□□□□ -1.7
RBM39-228ENST00000471635 FGF2P09038 288 aa4.44□□□□□ -1.7
RBM39-228ENST00000471635 TFEBP19484 476 aa4.44□□□□□ -1.7
RBM39-228ENST00000471635 HOXD12P35452 270 aa4.44□□□□□ -1.7
RBM39-228ENST00000471635 ERV3-1Q14264 604 aa4.44□□□□□ -1.7
RBM39-228ENST00000471635 CYB5RLQ6IPT4 315 aa4.44□□□□□ -1.7
RBM39-228ENST00000471635 RFX8Q6ZV50 586 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms