RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 VCPIP1Q96JH7 1222 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 ZFYVE19Q96K21 471 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 SCNM1Q9BWG6 230 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 RNF26Q9BY78 433 aaPredicted RBP1.7□□□□□ -2.14
UBXN4-207ENST00000471246 MAGEB5Q9BZ81 275 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 EBF3Q9H4W6 596 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 MLXIPLQ9NP71 852 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 DDX21Q9NR30 783 aaKnown RBP eCLIP1.7□□□□□ -2.14
UBXN4-207ENST00000471246 ZBTB40Q9NUA8 1239 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 ABHD10Q9NUJ1 306 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 SEMA5BQ9P283 1151 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 HEY2Q9UBP5 337 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 VPS4AQ9UN37 437 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 FAM50BQ9Y247 325 aa1.7□□□□□ -2.14
UBXN4-207ENST00000471246 SIRT4Q9Y6E7 314 aaPredicted RBP1.7□□□□□ -2.14
UBXN4-207ENST00000471246 SLC22A23A1A5C7 686 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 FAM90A10PA6NDY2 464 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 H3BNX3 289 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 PRYO14603 147 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 INSIG1O15503 277 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 CCNT2O60583 730 aaKnown RBP1.69□□□□□ -2.14
UBXN4-207ENST00000471246 SLC3A2P08195 630 aaKnown RBP1.69□□□□□ -2.14
UBXN4-207ENST00000471246 PSG1P11464 419 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 SLC5A1P13866 664 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 ST6GAL1P15907 406 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 PECAM1P16284 738 aaPredicted RBP1.69□□□□□ -2.14
UBXN4-207ENST00000471246 TNFRSF1BP20333 461 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 MATN1P21941 496 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 RPS6KB1P23443 525 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 HOXA7P31268 230 aaPredicted RBP1.69□□□□□ -2.14
UBXN4-207ENST00000471246 IDUAP35475 653 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 IGHMBP2P38935 993 aaKnown RBP1.69□□□□□ -2.14
UBXN4-207ENST00000471246 STT3AP46977 705 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 CPA2P48052 419 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 PRIM2P49643 509 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 VPS41P49754 854 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 SLC12A2P55011 1212 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 MTA1Q13330 715 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 MTX1Q13505 466 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 STIM1Q13586 685 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 PMS2P11Q13670 270 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 RAPGEF1Q13905 1077 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 KCNJ12Q14500 433 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 TWIST1Q15672 202 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 CNGA3Q16281 694 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 LEXMQ3ZCV2 418 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 ARHGAP15Q53QZ3 475 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 TMEM196Q5HYL7 178 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 FAM90A2PQ658T7 463 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 USP17L6PQ6QN14 398 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 RBM44Q6ZP01 1051 aaKnown RBP1.69□□□□□ -2.14
UBXN4-207ENST00000471246 CLASRPQ8N2M8 674 aaKnown RBP1.69□□□□□ -2.14
UBXN4-207ENST00000471246 ATP11CQ8NB49 1132 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 ABHD5Q8WTS1 349 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 PIGKQ92643 395 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 AKAP1Q92667 903 aaKnown RBP eCLIP1.69□□□□□ -2.14
UBXN4-207ENST00000471246 TRMT61AQ96FX7 289 aaKnown RBP1.69□□□□□ -2.14
UBXN4-207ENST00000471246 TRMOQ9BU70 441 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 ZBTB26Q9HCK0 441 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 AGO4Q9HCK5 861 aaKnown RBP1.69□□□□□ -2.14
UBXN4-207ENST00000471246 TMEM8AQ9HCN3 771 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 GJB4Q9NTQ9 266 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 POT1Q9NUX5 634 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 TMEM45AQ9NWC5 275 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 ASNSD1Q9NWL6 643 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 TMOD4Q9NZQ9 345 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 MYO1AQ9UBC5 1043 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 ZSCAN21Q9Y5A6 473 aaPredicted RBP1.69□□□□□ -2.14
UBXN4-207ENST00000471246 HS3ST3B1Q9Y662 390 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 SQORQ9Y6N5 450 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 NOTCH2Q04721 2471 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 NOTCH4Q99466 2003 aa1.69□□□□□ -2.14
UBXN4-207ENST00000471246 TTBK1Q5TCY1 1321 aaPredicted RBP1.68□□□□□ -2.14
UBXN4-207ENST00000471246 CCDC187A0A096LP49 1063 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP1.68□□□□□ -2.14
UBXN4-207ENST00000471246 B4DGG1 531 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 F8W810 466 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 APOL1O14791 398 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 AREL1O15033 823 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 PMM2O15305 246 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 ZSCAN9O15535 394 aaPredicted RBP1.68□□□□□ -2.14
UBXN4-207ENST00000471246 KCNQ3O43525 872 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 COQ9O75208 318 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 TULP3O75386 442 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 OAZ2O95190 189 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 NDST3O95803 873 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 SNHG28P0DPA3 235 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 ALADP13716 330 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 IDEP14735 1019 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 EGR1P18146 543 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 TFEBP19484 476 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 GABRB3P28472 473 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 DUSP1P28562 367 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 TKTP29401 623 aaKnown RBP1.68□□□□□ -2.14
UBXN4-207ENST00000471246 SLC8A1P32418 973 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 ME1P48163 572 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 SOX2P48431 317 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 HTR6P50406 440 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 B4GALNT1Q00973 533 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 IFIT5Q13325 482 aaKnown RBP1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms