RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 ARHGAP33O14559 1287 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 TEX33O43247 280 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 CACNG3O60359 315 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 TLR5O60602 858 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 OPHN1O60890 802 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 CFIP05156 583 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 PBX1P40424 430 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 GCLMP48507 274 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 ATXN3P54252 364 aaPredicted RBP9.54□□□□□ -0.88
SF3A1-206ENST00000471037 ZNF33AQ06730 810 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 PPP3CAQ08209 521 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 HNRNPDQ14103 355 aaKnown RBP9.54□□□□□ -0.88
SF3A1-206ENST00000471037 EXOC3L4Q17RC7 722 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 ANO4Q32M45 955 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 ZNF667Q5HYK9 610 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 KRT39Q6A163 491 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 GRAMD4Q6IC98 578 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 KIAA1211LQ6NV74 962 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 GBP6Q6ZN66 633 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 TMEM25Q86YD3 366 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 MIB1Q86YT6 1006 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 SLC41A1Q8IVJ1 513 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 VSTM4Q8IW00 320 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 FUKQ8N0W3 1084 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 HDDC3Q8N4P3 179 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 ZMIZ2Q8NF64 920 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 WBP2Q969T9 261 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 IQCDQ96DY2 449 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 GABRG3Q99928 467 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 SMYD3Q9H7B4 428 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 CSNK1G1Q9HCP0 422 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 CYLDQ9NQC7 956 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 KRT82Q9NSB4 513 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 DNAAF2Q9NVR5 837 aaKnown RBP9.54□□□□□ -0.88
SF3A1-206ENST00000471037 GMIPQ9P107 970 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 KLK13Q9UKR3 277 aa9.54□□□□□ -0.88
SF3A1-206ENST00000471037 PKD1L2Q7Z442 2459 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 MYOFQ9NZM1 2061 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 SPAARA0A1B0GVQ0 90 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 GOLGA6L6A8MZA4 724 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 GFRA2O00451 464 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 TRIM24O15164 1050 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 PHACTR2O75167 634 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 GJB3O75712 270 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 AP1G2O75843 785 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 CD59P13987 128 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 NDUFV2P19404 249 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 RDXP35241 583 aaKnown RBP9.53□□□□□ -0.88
SF3A1-206ENST00000471037 CDH8P55286 799 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 CCDC173Q0VFZ6 552 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 SLC14A1Q13336 389 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 TRIM14Q14142 442 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 SYCP1Q15431 976 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 ZNF423Q2M1K9 1284 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 ZNF699Q32M78 642 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 ZACNQ401N2 412 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 CBWD6Q4V339 395 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 CBWD3Q5JTY5 395 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 CBWD5Q5RIA9 395 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 EGFLAMQ63HQ2 1017 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 SPECC1LQ69YQ0 1117 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 SV2AQ7L0J3 742 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 DRC7Q8IY82 874 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 CHPFQ8IZ52 775 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 CRYBG2Q8N1P7 616 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 MINDY1Q8N5J2 469 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 IPO4Q8TEX9 1081 aaKnown RBP9.53□□□□□ -0.88
SF3A1-206ENST00000471037 ZNF419Q96HQ0 510 aaPredicted RBP9.53□□□□□ -0.88
SF3A1-206ENST00000471037 XPO6Q96QU8 1125 aaKnown RBP9.53□□□□□ -0.88
SF3A1-206ENST00000471037 ACOX2Q99424 681 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 SMOQ99835 787 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 MED10Q9BTT4 135 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 NUP58Q9BVL2 599 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 GTPBP2Q9BX10 602 aaKnown RBP9.53□□□□□ -0.88
SF3A1-206ENST00000471037 KLF16Q9BXK1 252 aaPredicted RBP9.53□□□□□ -0.88
SF3A1-206ENST00000471037 NACA2Q9H009 215 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 SDCBP2Q9H190 292 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 FBXO44Q9H4M3 255 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 MMRN2Q9H8L6 949 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 FSCN3Q9NQT6 498 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 TLR8Q9NR97 1041 aaKnown RBP9.53□□□□□ -0.88
SF3A1-206ENST00000471037 DNAJC17Q9NVM6 304 aaKnown RBP9.53□□□□□ -0.88
SF3A1-206ENST00000471037 WDR35Q9P2L0 1181 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 SUSD2Q9UGT4 822 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 CYP8B1Q9UNU6 501 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 SIK3Q9Y2K2 1263 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 COQ4Q9Y3A0 265 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 DAAM1Q9Y4D1 1078 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.53□□□□□ -0.88
SF3A1-206ENST00000471037 CACNA1GO43497 2377 aa9.53□□□□□ -0.88
SF3A1-206ENST00000471037 AKAP13Q12802 2813 aa9.52□□□□□ -0.88
SF3A1-206ENST00000471037 PRRT4C9JH25 899 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 NEDD8-MDP1E9PL57 170 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 ZBTB24O43167 697 aaPredicted RBP9.52□□□□□ -0.89
SF3A1-206ENST00000471037 BEST1O76090 585 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 VNN1O95497 513 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 C4BPAP04003 597 aaKnown RBP9.52□□□□□ -0.89
SF3A1-206ENST00000471037 CAPNS1P04632 268 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 SYPP08247 313 aa9.52□□□□□ -0.89
SF3A1-206ENST00000471037 IRF1P10914 325 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms