RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 IRF1P10914 325 aa9.4□□□□□ -0.9
SYNGAP1-205ENST00000470232 WARSP23381 471 aaKnown RBP9.4□□□□□ -0.9
SYNGAP1-205ENST00000470232 CDH8P55286 799 aa9.4□□□□□ -0.9
SYNGAP1-205ENST00000470232 TARDBPQ13148 414 aaKnown RBP eCLIP9.4□□□□□ -0.9
SYNGAP1-205ENST00000470232 IQCB1Q15051 598 aa9.4□□□□□ -0.9
SYNGAP1-205ENST00000470232 CCDC142Q17RM4 750 aa9.4□□□□□ -0.9
SYNGAP1-205ENST00000470232 MDH1BQ5I0G3 518 aa9.4□□□□□ -0.9
SYNGAP1-205ENST00000470232 SNX30Q5VWJ9 437 aa9.4□□□□□ -0.9
SYNGAP1-205ENST00000470232 SARM1Q6SZW1 724 aa9.4□□□□□ -0.9
SYNGAP1-205ENST00000470232 TPGS1Q6ZTW0 290 aa9.4□□□□□ -0.9
SYNGAP1-205ENST00000470232 BRAPQ7Z569 592 aa9.4□□□□□ -0.9
SYNGAP1-205ENST00000470232 LURAP1LQ8IV03 231 aa9.4□□□□□ -0.9
SYNGAP1-205ENST00000470232 BRSK2Q8IWQ3 736 aa9.4□□□□□ -0.9
SYNGAP1-205ENST00000470232 CEP57L1Q8IYX8 460 aa9.4□□□□□ -0.9
SYNGAP1-205ENST00000470232 FAM181AQ8N9Y4 354 aa9.4□□□□□ -0.9
SYNGAP1-205ENST00000470232 C1orf216Q8TAB5 229 aa9.4□□□□□ -0.9
SYNGAP1-205ENST00000470232 LGMNQ99538 433 aa9.4□□□□□ -0.9
SYNGAP1-205ENST00000470232 CRTAC1Q9NQ79 661 aa9.4□□□□□ -0.9
SYNGAP1-205ENST00000470232 MARK1Q9P0L2 795 aa9.4□□□□□ -0.9
SYNGAP1-205ENST00000470232 PTPRQQ9UMZ3 2332 aa9.4□□□□□ -0.9
SYNGAP1-205ENST00000470232 SPTA1P02549 2419 aa9.4□□□□□ -0.91
SYNGAP1-205ENST00000470232 MGAQ8IWI9 3026 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 KNL1Q8NG31 2342 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 COL6A6A6NMZ7 2263 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 VWA3AA6NCI4 1184 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 KCNJ18B7U540 433 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 HCRTO43612 131 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 PRPF6O94906 941 aaKnown RBP9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 YEATS4O95619 227 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 NTRK1P04629 796 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 CISD3P0C7P0 127 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 C6P13671 934 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 PTPN1P18031 435 aaKnown RBP9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 GARTP22102 1010 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 ADSSP30520 456 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 UBA7P41226 1012 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 TOB1P50616 345 aaPredicted RBP9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 C21orf59P57076 290 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 TMPRSS3P57727 454 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 ARID5AQ03989 594 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 TLE3Q04726 772 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 KCNH2Q12809 1159 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 SURF1Q15526 300 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 TMEM119Q4V9L6 283 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 PKDCCQ504Y2 493 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 ARL6IP4Q66PJ3 421 aaKnown RBP9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 ZNF720Q7Z2F6 126 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 LIMS2Q7Z4I7 341 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 CACTIN-AS1Q8N1I8 211 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 ZNF248Q8NDW4 579 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 OR6B3Q8NGW1 331 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 RASSF8Q8NHQ8 419 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 KBTBD7Q8WVZ9 684 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 CNDP2Q96KP4 475 aaKnown RBP9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 ZFRQ96KR1 1074 aaKnown RBP9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 AK8Q96MA6 479 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 ACCSQ96QU6 501 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 MKRN2Q9H000 416 aaKnown RBP9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 NAT10Q9H0A0 1025 aaKnown RBP9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 TM9SF3Q9HD45 589 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 THAP10Q9P2Z0 257 aaPredicted RBP9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 DNMT3LQ9UJW3 386 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 PCDHA7Q9UN72 937 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 HECTD1Q9ULT8 2610 aa9.39□□□□□ -0.91
SYNGAP1-205ENST00000470232 MUC22E2RYF6 1773 aaPredicted RBP9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 TISP43B9A030 160 aa9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 H0Y8X5 98 aa9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 KCNK3O14649 394 aa9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 SPTLC2O15270 562 aa9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 YKT6O15498 198 aa9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 ITGAVP06756 1048 aa9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 ABCB4P21439 1286 aa9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 CD27P26842 260 aa9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 BCAT1P54687 386 aa9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 TPM4P67936 248 aa9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 LRMPQ12912 555 aa9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 ILKQ13418 452 aa9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 DUOXA2Q1HG44 320 aa9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 RILPL1Q5EBL4 403 aa9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 HES3Q5TGS1 186 aa9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 FAM124AQ86V42 546 aa9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 SPACA3Q8IXA5 215 aa9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 SYCP3Q8IZU3 236 aa9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 AOPEPQ8N6M6 819 aa9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 NOC3LQ8WTT2 800 aaKnown RBP9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 MRFAP1L1Q96HT8 127 aa9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 FIZ1Q96SL8 496 aa9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 ACE2Q9BYF1 805 aaPredicted RBP9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 MTMR12Q9C0I1 747 aa9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 BTBD1Q9H0C5 482 aa9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 FBXO44Q9H4M3 255 aa9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 CCSER2Q9H7U1 834 aa9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 TLR8Q9NR97 1041 aaKnown RBP9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 FBXO10Q9UK96 956 aa9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 ZNF510Q9Y2H8 683 aa9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 SLC27A6Q9Y2P4 619 aa9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 BOLA1Q9Y3E2 137 aa9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 CLIC4Q9Y696 253 aa9.38□□□□□ -0.91
SYNGAP1-205ENST00000470232 PTPRJQ12913 1337 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms