RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 RUBCNQ92622 972 aa18.46■□□□□ 0.55
MRPL28-208ENST00000469744 ATP2A3Q93084 1043 aa18.46■□□□□ 0.55
MRPL28-208ENST00000469744 CALR3Q96L12 384 aaKnown RBP18.46■□□□□ 0.55
MRPL28-208ENST00000469744 OSBPL9Q96SU4 736 aa18.46■□□□□ 0.55
MRPL28-208ENST00000469744 HNRNPABQ99729 332 aaKnown RBP18.46■□□□□ 0.55
MRPL28-208ENST00000469744 CCSER2Q9H7U1 834 aa18.46■□□□□ 0.55
MRPL28-208ENST00000469744 CSNK1G1Q9HCP0 422 aa18.46■□□□□ 0.55
MRPL28-208ENST00000469744 MYOFQ9NZM1 2061 aa18.46■□□□□ 0.55
MRPL28-208ENST00000469744 DDX3XO00571 662 aaKnown RBP eCLIP18.46■□□□□ 0.542e-47■■■■□ 23
MRPL28-208ENST00000469744 CES2O00748 559 aa18.46■□□□□ 0.54
MRPL28-208ENST00000469744 COCHO43405 550 aa18.46■□□□□ 0.54
MRPL28-208ENST00000469744 ERLIN1O75477 346 aa18.46■□□□□ 0.54
MRPL28-208ENST00000469744 H2AFZP0C0S5 128 aa18.46■□□□□ 0.54
MRPL28-208ENST00000469744 CXCL12P48061 93 aa18.46■□□□□ 0.54
MRPL28-208ENST00000469744 TMEM196Q5HYL7 178 aa18.46■□□□□ 0.54
MRPL28-208ENST00000469744 WDR93Q6P2C0 686 aa18.46■□□□□ 0.54
MRPL28-208ENST00000469744 PKN3Q6P5Z2 889 aa18.46■□□□□ 0.54
MRPL28-208ENST00000469744 CLEC20AQ6ZU45 233 aa18.46■□□□□ 0.54
MRPL28-208ENST00000469744 H2AFVQ71UI9 128 aa18.46■□□□□ 0.54
MRPL28-208ENST00000469744 CREG2Q8IUH2 290 aa18.46■□□□□ 0.54
MRPL28-208ENST00000469744 SPEM1Q8N4L4 309 aa18.46■□□□□ 0.54
MRPL28-208ENST00000469744 PDZD8Q8NEN9 1154 aa18.46■□□□□ 0.54
MRPL28-208ENST00000469744 FAM81BQ96LP2 452 aa18.46■□□□□ 0.54
MRPL28-208ENST00000469744 IER2Q9BTL4 223 aa18.46■□□□□ 0.54
MRPL28-208ENST00000469744 ARFGAP3Q9NP61 516 aa18.46■□□□□ 0.54
MRPL28-208ENST00000469744 CISHQ9NSE2 258 aa18.46■□□□□ 0.54
MRPL28-208ENST00000469744 ZSCAN32Q9NX65 697 aa18.46■□□□□ 0.54
MRPL28-208ENST00000469744 IL37Q9NZH6 218 aa18.46■□□□□ 0.54
MRPL28-208ENST00000469744 CFAP97Q9P2B7 532 aa18.46■□□□□ 0.54
MRPL28-208ENST00000469744 PCDHGA2Q9Y5H1 932 aa18.46■□□□□ 0.54
MRPL28-208ENST00000469744 EGFP01133 1207 aa18.45■□□□□ 0.54
MRPL28-208ENST00000469744 TCF3P15923 654 aa18.45■□□□□ 0.54
MRPL28-208ENST00000469744 PFKLP17858 780 aa18.45■□□□□ 0.54
MRPL28-208ENST00000469744 DMWDQ09019 674 aa18.45■□□□□ 0.54
MRPL28-208ENST00000469744 PPP1R26Q5T8A7 1209 aaPredicted RBP18.45■□□□□ 0.54
MRPL28-208ENST00000469744 MMGT1Q8N4V1 131 aa18.45■□□□□ 0.54
MRPL28-208ENST00000469744 ZBTB44Q8NCP5 570 aa18.45■□□□□ 0.54
MRPL28-208ENST00000469744 OVCA2Q8WZ82 227 aa18.45■□□□□ 0.54
MRPL28-208ENST00000469744 NELL1Q92832 810 aa18.45■□□□□ 0.54
MRPL28-208ENST00000469744 TLR10Q9BXR5 811 aa18.45■□□□□ 0.54
MRPL28-208ENST00000469744 SEMA4AQ9H3S1 761 aa18.45■□□□□ 0.54
MRPL28-208ENST00000469744 HHLA1C9JL84 531 aa18.44■□□□□ 0.54
MRPL28-208ENST00000469744 TRDMT1O14717 391 aaKnown RBP18.44■□□□□ 0.54
MRPL28-208ENST00000469744 CYP26A1O43174 497 aa18.44■□□□□ 0.54
MRPL28-208ENST00000469744 SRGAP2O75044 1071 aa18.44■□□□□ 0.54
MRPL28-208ENST00000469744 GALK1P51570 392 aa18.44■□□□□ 0.54
MRPL28-208ENST00000469744 NAP1L1P55209 391 aaKnown RBP18.44■□□□□ 0.54
MRPL28-208ENST00000469744 GRSF1Q12849 480 aaKnown RBP eCLIP18.44■□□□□ 0.54
MRPL28-208ENST00000469744 HECTD3Q5T447 861 aa18.44■□□□□ 0.54
MRPL28-208ENST00000469744 MEI1Q5TIA1 1274 aa18.44■□□□□ 0.54
MRPL28-208ENST00000469744 MAMSTRQ6ZN01 415 aa18.44■□□□□ 0.54
MRPL28-208ENST00000469744 NOA1Q8NC60 698 aaKnown RBP18.44■□□□□ 0.54
MRPL28-208ENST00000469744 OLIG1Q8TAK6 271 aa18.44■□□□□ 0.54
MRPL28-208ENST00000469744 UBE2Q2Q8WVN8 375 aa18.44■□□□□ 0.54
MRPL28-208ENST00000469744 ZFRQ96KR1 1074 aaKnown RBP18.44■□□□□ 0.54
MRPL28-208ENST00000469744 HEXIM2Q96MH2 286 aaKnown RBP18.44■□□□□ 0.54
MRPL28-208ENST00000469744 P2RY13Q9BPV8 354 aa18.44■□□□□ 0.54
MRPL28-208ENST00000469744 POLR3BQ9NW08 1133 aaPredicted RBP18.44■□□□□ 0.54
MRPL28-208ENST00000469744 DMXL1Q9Y485 3027 aa18.43■□□□□ 0.54
MRPL28-208ENST00000469744 FAM92AA1XBS5 289 aa18.43■□□□□ 0.54
MRPL28-208ENST00000469744 BUB1O43683 1085 aa18.43■□□□□ 0.54
MRPL28-208ENST00000469744 PALMO75781 387 aa18.43■□□□□ 0.54
MRPL28-208ENST00000469744 ZDHHC11BP0C7U3 371 aa18.43■□□□□ 0.54
MRPL28-208ENST00000469744 ACO1P21399 889 aaKnown RBP18.43■□□□□ 0.54
MRPL28-208ENST00000469744 PAFAH1B1P43034 410 aa18.43■□□□□ 0.54
MRPL28-208ENST00000469744 RAD23BP54727 409 aa18.43■□□□□ 0.54
MRPL28-208ENST00000469744 HEATR6Q6AI08 1181 aaKnown RBP18.43■□□□□ 0.54
MRPL28-208ENST00000469744 CCDC70Q6NSX1 233 aa18.43■□□□□ 0.54
MRPL28-208ENST00000469744 SUMF1Q8NBK3 374 aa18.43■□□□□ 0.54
MRPL28-208ENST00000469744 SLC4A11Q8NBS3 891 aa18.43■□□□□ 0.54
MRPL28-208ENST00000469744 HINFPQ9BQA5 517 aa18.43■□□□□ 0.54
MRPL28-208ENST00000469744 PACSIN1Q9BY11 444 aa18.43■□□□□ 0.54
MRPL28-208ENST00000469744 EPC1Q9H2F5 836 aa18.43■□□□□ 0.54
MRPL28-208ENST00000469744 GRID2IPA4D2P6 1211 aa18.42■□□□□ 0.54
MRPL28-208ENST00000469744 CHURC1-FNTBB4DL54 471 aa18.42■□□□□ 0.54
MRPL28-208ENST00000469744 RNF40O75150 1001 aa18.42■□□□□ 0.54
MRPL28-208ENST00000469744 NFATC1O95644 943 aa18.42■□□□□ 0.54
MRPL28-208ENST00000469744 CYP17A1P05093 508 aa18.42■□□□□ 0.54
MRPL28-208ENST00000469744 TMEM253P0C7T8 217 aa18.42■□□□□ 0.54
MRPL28-208ENST00000469744 PNMA6AP0CW24 399 aaPredicted RBP18.42■□□□□ 0.54
MRPL28-208ENST00000469744 IRF1P10914 325 aa18.42■□□□□ 0.54
MRPL28-208ENST00000469744 TNFAIP3P21580 790 aa18.42■□□□□ 0.54
MRPL28-208ENST00000469744 FNTBP49356 437 aa18.42■□□□□ 0.54
MRPL28-208ENST00000469744 PPP2R5DQ14738 602 aa18.42■□□□□ 0.54
MRPL28-208ENST00000469744 TCEAL1Q15170 157 aa18.42■□□□□ 0.54
MRPL28-208ENST00000469744 SLFN11Q7Z7L1 901 aa18.42■□□□□ 0.54
MRPL28-208ENST00000469744 KRT222Q8N1A0 295 aa18.42■□□□□ 0.54
MRPL28-208ENST00000469744 EZH1Q92800 747 aaPredicted RBP18.42■□□□□ 0.54
MRPL28-208ENST00000469744 WBP2Q969T9 261 aa18.42■□□□□ 0.54
MRPL28-208ENST00000469744 NACA2Q9H009 215 aa18.42■□□□□ 0.54
MRPL28-208ENST00000469744 FBXO44Q9H4M3 255 aa18.42■□□□□ 0.54
MRPL28-208ENST00000469744 UBE2TQ9NPD8 197 aaPredicted RBP18.42■□□□□ 0.54
MRPL28-208ENST00000469744 COMMD8Q9NX08 183 aa18.42■□□□□ 0.54
MRPL28-208ENST00000469744 OSER1Q9NX31 292 aa18.42■□□□□ 0.54
MRPL28-208ENST00000469744 KIAA1549LQ6ZVL6 1849 aa18.42■□□□□ 0.54
MRPL28-208ENST00000469744 K7ESF4 209 aa18.41■□□□□ 0.54
MRPL28-208ENST00000469744 PDE2AO00408 941 aaPredicted RBP18.41■□□□□ 0.54
MRPL28-208ENST00000469744 FOXN3O00409 490 aaPredicted RBP18.41■□□□□ 0.54
MRPL28-208ENST00000469744 TLR5O60602 858 aa18.41■□□□□ 0.54
MRPL28-208ENST00000469744 LILRB5O75023 590 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms