RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 TOP1MTQ969P6 601 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 WNK4Q96J92 1243 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 SLITRK1Q96PX8 696 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 ALPK1Q96QP1 1244 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 ZNF347Q96SE7 839 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 APOL6Q9BWW8 343 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 NPLQ9BXD5 320 aaPredicted RBP9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 CPVLQ9H3G5 476 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 VRTNQ9H8Y1 702 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 MRPL47Q9HD33 250 aaKnown RBP9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 ANLNQ9NQW6 1124 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 HACD3Q9P035 362 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 MTMR7Q9Y216 660 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 ATF5Q9Y2D1 282 aaPredicted RBP9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 ATP11BQ9Y2G3 1177 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 DNAJC16Q9Y2G8 782 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 CROCCQ5TZA2 2017 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 FOCADQ5VW36 1801 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 PNMA6FA0A0J9YX94 578 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 A0A1W2PPW3 197 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 TCRBV9S1A1TA0A576 114 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 SGK1O00141 431 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 GPR25O00155 361 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 IDH3BO43837 385 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 CLPXO76031 633 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 WEE2P0C1S8 567 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 ETS1P14921 441 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 YBX3P16989 372 aaKnown RBP eCLIP9.29□□□□□ -0.922e-7■■□□□ 12.5
SMARCE1-207ENST00000469334 GRK2P25098 689 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 NOVP48745 357 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 IDH3AP50213 366 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 NFATC3Q12968 1075 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 BNIP3Q12983 259 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 MSS51Q4VC12 460 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 TIGD2Q4W5G0 525 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 LRRC38Q5VT99 294 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 SLX4IPQ5VYV7 408 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 GADL1Q6ZQY3 521 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 C12orf56Q8IXR9 622 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 MYCT1Q8N699 235 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 PACRGLQ8N7B6 248 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 SPERTQ8NA61 448 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 MARCH10Q8NA82 808 aaPredicted RBP9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 PDZD8Q8NEN9 1154 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 ACDQ96AP0 544 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 COA7Q96BR5 231 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 RMND5AQ9H871 391 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 VAT1LQ9HCJ6 419 aa9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 MRPL40Q9NQ50 206 aaKnown RBP9.29□□□□□ -0.92
SMARCE1-207ENST00000469334 DYTNA2CJ06 578 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 C7orf72A4D263 438 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 J3QRK9 145 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 GRIN3BO60391 1043 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 GMNNO75496 209 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 BCL10O95999 233 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 UNGP13051 313 aaPredicted RBP9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 CD58P19256 250 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 CCNA2P20248 432 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 ME2P23368 584 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 EPHA3P29320 983 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 GABRB2P47870 512 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 NUMBP49757 651 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 GPC3P51654 580 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 TAS2R40P59535 323 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 MCCD1P59942 119 aaPredicted RBP9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 PSMC6P62333 389 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 CD300CQ08708 224 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 KLF10Q13118 480 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 PTK2BQ14289 1009 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 RFTN1Q14699 578 aaPredicted RBP9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 SF3B4Q15427 424 aaKnown RBP eCLIP9.28□□□□□ -0.925e-11■■□□□ 13.3
SMARCE1-207ENST00000469334 BBS9Q3SYG4 887 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 CCDC14Q49A88 953 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 ZNF394Q53GI3 561 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 FAM47CQ5HY64 1035 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 TEDDM1Q5T9Z0 273 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 FAXCQ5TGI0 409 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 SIGIRRQ6IA17 410 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 NEK10Q6ZWH5 1172 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 HEATR4Q86WZ0 1026 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 PGAM4Q8N0Y7 254 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 KYQ8NBH2 561 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 BHLHE22Q8NFJ8 381 aaPredicted RBP9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 SLC35B2Q8TB61 432 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 PNPT1Q8TCS8 783 aaKnown RBP9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 DOT1LQ8TEK3 1739 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 TANKQ92844 425 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 FBXL8Q96CD0 374 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 KREMEN1Q96MU8 473 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 SMARCAD1Q9H4L7 1026 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 HMG20AQ9NP66 347 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 KCND2Q9NZV8 630 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 SLAIN2Q9P270 581 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 CLDN25C9JDP6 229 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 GOLGA8SH3BPF8 625 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 GOLGA8MH3BSY2 632 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 TRDMT1O14717 391 aaKnown RBP9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 KRT1P04264 644 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 SERPINE1P05121 402 aa9.28□□□□□ -0.92
SMARCE1-207ENST00000469334 P4HBP07237 508 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms