RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 HEY1Q9Y5J3 304 aa19.68■□□□□ 0.74
SMC4-209ENST00000468653 CREB3O43889 395 aa19.67■□□□□ 0.74
SMC4-209ENST00000468653 GJB5O95377 273 aa19.67■□□□□ 0.74
SMC4-209ENST00000468653 RBP3P10745 1247 aa19.67■□□□□ 0.74
SMC4-209ENST00000468653 ITIH2P19823 946 aa19.67■□□□□ 0.74
SMC4-209ENST00000468653 TUFMP49411 452 aaKnown RBP19.67■□□□□ 0.74
SMC4-209ENST00000468653 SCAPQ12770 1279 aa19.67■□□□□ 0.74
SMC4-209ENST00000468653 ZDHHC24Q6UX98 284 aa19.67■□□□□ 0.74
SMC4-209ENST00000468653 FIBCD1Q8N539 461 aa19.67■□□□□ 0.74
SMC4-209ENST00000468653 FBXO25Q8TCJ0 367 aa19.67■□□□□ 0.74
SMC4-209ENST00000468653 GIPC2Q8TF65 315 aa19.67■□□□□ 0.74
SMC4-209ENST00000468653 RSAD2Q8WXG1 361 aa19.67■□□□□ 0.74
SMC4-209ENST00000468653 FAM129AQ9BZQ8 928 aa19.67■□□□□ 0.74
SMC4-209ENST00000468653 TKTL2Q9H0I9 626 aa19.67■□□□□ 0.74
SMC4-209ENST00000468653 SMOC2Q9H3U7 446 aa19.67■□□□□ 0.74
SMC4-209ENST00000468653 COMMD8Q9NX08 183 aa19.67■□□□□ 0.74
SMC4-209ENST00000468653 MTRF1LQ9UGC7 380 aaKnown RBP19.67■□□□□ 0.74
SMC4-209ENST00000468653 AFF4Q9UHB7 1163 aaKnown RBP19.67■□□□□ 0.74
SMC4-209ENST00000468653 H7C0C1 242 aa19.67■□□□□ 0.74
SMC4-209ENST00000468653 IFNB1P01574 187 aa19.67■□□□□ 0.74
SMC4-209ENST00000468653 AMPD1P23109 780 aa19.67■□□□□ 0.74
SMC4-209ENST00000468653 KLRC2P26717 231 aa19.67■□□□□ 0.74
SMC4-209ENST00000468653 ATP5OP48047 213 aa19.67■□□□□ 0.74
SMC4-209ENST00000468653 PSRC1Q6PGN9 363 aaPredicted RBP19.67■□□□□ 0.74
SMC4-209ENST00000468653 DARS2Q6PI48 645 aaKnown RBP19.67■□□□□ 0.74
SMC4-209ENST00000468653 PRUNE1Q86TP1 453 aa19.67■□□□□ 0.74
SMC4-209ENST00000468653 ZC3H18Q86VM9 953 aaKnown RBP19.67■□□□□ 0.74
SMC4-209ENST00000468653 VPS52Q8N1B4 723 aa19.67■□□□□ 0.74
SMC4-209ENST00000468653 ART4Q93070 314 aa19.67■□□□□ 0.74
SMC4-209ENST00000468653 LRRC45Q96CN5 670 aa19.67■□□□□ 0.74
SMC4-209ENST00000468653 C10orf88Q9H8K7 445 aa19.67■□□□□ 0.74
SMC4-209ENST00000468653 PRDM16Q9HAZ2 1276 aa19.67■□□□□ 0.74
SMC4-209ENST00000468653 SFMBT1Q9UHJ3 866 aa19.67■□□□□ 0.74
SMC4-209ENST00000468653 HPCAL4Q9UM19 191 aa19.67■□□□□ 0.74
SMC4-209ENST00000468653 FAM92AA1XBS5 289 aa19.66■□□□□ 0.74
SMC4-209ENST00000468653 EEF2KO00418 725 aaKnown RBP19.66■□□□□ 0.74
SMC4-209ENST00000468653 IRAK2O43187 625 aa19.66■□□□□ 0.74
SMC4-209ENST00000468653 IGLV3-25P01717 112 aa19.66■□□□□ 0.74
SMC4-209ENST00000468653 HTRA4P83105 476 aaPredicted RBP19.66■□□□□ 0.74
SMC4-209ENST00000468653 MTMR3Q13615 1198 aa19.66■□□□□ 0.74
SMC4-209ENST00000468653 TMEM240Q5SV17 173 aa19.66■□□□□ 0.74
SMC4-209ENST00000468653 BBOF1Q8ND07 529 aa19.66■□□□□ 0.74
SMC4-209ENST00000468653 ZNF461Q8TAF7 563 aa19.66■□□□□ 0.74
SMC4-209ENST00000468653 CASP10Q92851 521 aa19.66■□□□□ 0.74
SMC4-209ENST00000468653 ANLNQ9NQW6 1124 aa19.66■□□□□ 0.74
SMC4-209ENST00000468653 OSER1Q9NX31 292 aa19.66■□□□□ 0.74
SMC4-209ENST00000468653 NUDT5Q9UKK9 219 aa19.66■□□□□ 0.74
SMC4-209ENST00000468653 INSL6Q9Y581 213 aa19.66■□□□□ 0.74
SMC4-209ENST00000468653 SLC38A8A6NNN8 435 aa19.65■□□□□ 0.74
SMC4-209ENST00000468653 ZSCAN5DPP0CG00 497 aa19.65■□□□□ 0.74
SMC4-209ENST00000468653 DNAJB2P25686 324 aa19.65■□□□□ 0.74
SMC4-209ENST00000468653 IVDP26440 423 aa19.65■□□□□ 0.74
SMC4-209ENST00000468653 TAF10Q12962 218 aa19.65■□□□□ 0.74
SMC4-209ENST00000468653 TPGS2Q68CL5 300 aa19.65■□□□□ 0.74
SMC4-209ENST00000468653 MREGQ8N565 214 aa19.65■□□□□ 0.74
SMC4-209ENST00000468653 GLIS1Q8NBF1 620 aa19.65■□□□□ 0.74
SMC4-209ENST00000468653 TSEN2Q8NCE0 465 aaKnown RBP19.65■□□□□ 0.74
SMC4-209ENST00000468653 PCDH9Q9HC56 1237 aa19.65■□□□□ 0.74
SMC4-209ENST00000468653 TLR8Q9NR97 1041 aaKnown RBP19.65■□□□□ 0.74
SMC4-209ENST00000468653 CXXC1Q9P0U4 656 aaPredicted RBP19.65■□□□□ 0.74
SMC4-209ENST00000468653 ANAPC5Q9UJX4 755 aa19.65■□□□□ 0.74
SMC4-209ENST00000468653 COL4A4P53420 1690 aaPredicted RBP19.65■□□□□ 0.74
SMC4-209ENST00000468653 MYO16Q9Y6X6 1858 aa19.65■□□□□ 0.74
SMC4-209ENST00000468653 ETS1P14921 441 aa19.65■□□□□ 0.74
SMC4-209ENST00000468653 ATF6P18850 670 aa19.65■□□□□ 0.74
SMC4-209ENST00000468653 HSPA9P38646 679 aaKnown RBP19.65■□□□□ 0.74
SMC4-209ENST00000468653 NR2C2P49116 596 aa19.65■□□□□ 0.74
SMC4-209ENST00000468653 PSEN1P49768 467 aa19.65■□□□□ 0.74
SMC4-209ENST00000468653 GPS2Q13227 327 aa19.65■□□□□ 0.74
SMC4-209ENST00000468653 BRMS1LQ5PSV4 323 aa19.65■□□□□ 0.74
SMC4-209ENST00000468653 RFX8Q6ZV50 586 aa19.65■□□□□ 0.74
SMC4-209ENST00000468653 CEP295NLQ96MC4 621 aa19.65■□□□□ 0.74
SMC4-209ENST00000468653 SERPINB11Q96P15 392 aa19.65■□□□□ 0.74
SMC4-209ENST00000468653 ARHGEF4Q9NR80 690 aa19.65■□□□□ 0.74
SMC4-209ENST00000468653 MRPL17Q9NRX2 175 aaKnown RBP19.65■□□□□ 0.74
SMC4-209ENST00000468653 OGFRQ9NZT2 677 aa19.65■□□□□ 0.74
SMC4-209ENST00000468653 STK39Q9UEW8 545 aa19.65■□□□□ 0.74
SMC4-209ENST00000468653 MAGED2Q9UNF1 606 aaPredicted RBP19.65■□□□□ 0.74
SMC4-209ENST00000468653 I6L893 689 aaPredicted RBP19.64■□□□□ 0.73
SMC4-209ENST00000468653 MSI1O43347 362 aaKnown RBP19.64■□□□□ 0.73
SMC4-209ENST00000468653 FGF18O76093 207 aa19.64■□□□□ 0.73
SMC4-209ENST00000468653 ABLIM3O94929 683 aa19.64■□□□□ 0.73
SMC4-209ENST00000468653 SYN1P17600 705 aa19.64■□□□□ 0.73
SMC4-209ENST00000468653 STIP1P31948 543 aaKnown RBP19.64■□□□□ 0.73
SMC4-209ENST00000468653 CCR1P32246 355 aa19.64■□□□□ 0.73
SMC4-209ENST00000468653 ITGA8P53708 1063 aa19.64■□□□□ 0.73
SMC4-209ENST00000468653 TPI1P60174 286 aa19.64■□□□□ 0.73
SMC4-209ENST00000468653 CAV1Q03135 178 aa19.64■□□□□ 0.73
SMC4-209ENST00000468653 DHX9Q08211 1270 aaKnown RBP19.64■□□□□ 0.73
SMC4-209ENST00000468653 GPS1Q13098 491 aa19.64■□□□□ 0.73
SMC4-209ENST00000468653 EIF4EBP2Q13542 120 aaPredicted RBP19.64■□□□□ 0.73
SMC4-209ENST00000468653 P3H1Q32P28 736 aa19.64■□□□□ 0.73
SMC4-209ENST00000468653 IZUMO3Q5VZ72 239 aa19.64■□□□□ 0.73
SMC4-209ENST00000468653 NCBP2-AS2Q69YL0 99 aa19.64■□□□□ 0.73
SMC4-209ENST00000468653 MSANTD2Q6P1R3 559 aa19.64■□□□□ 0.73
SMC4-209ENST00000468653 UNC45BQ8IWX7 931 aa19.64■□□□□ 0.73
SMC4-209ENST00000468653 FAM71DQ8N9W8 422 aa19.64■□□□□ 0.73
SMC4-209ENST00000468653 AUTS2Q8WXX7 1259 aa19.64■□□□□ 0.73
SMC4-209ENST00000468653 CYP4F11Q9HBI6 524 aa19.64■□□□□ 0.73
SMC4-209ENST00000468653 TMEM51Q9NW97 253 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms