RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 TSG101Q99816 390 aa22.07■■□□□ 1.12
COL9A3-207ENST00000467819 SLC32A1Q9H598 525 aa22.07■■□□□ 1.12
COL9A3-207ENST00000467819 CAPN10Q9HC96 672 aa22.07■■□□□ 1.12
COL9A3-207ENST00000467819 RMND1Q9NWS8 449 aa22.07■■□□□ 1.12
COL9A3-207ENST00000467819 AKAP13Q12802 2813 aa22.07■■□□□ 1.12
COL9A3-207ENST00000467819 ASPMQ8IZT6 3477 aa22.06■■□□□ 1.12
COL9A3-207ENST00000467819 C1QTNF9BB2RNN3 333 aa22.06■■□□□ 1.12
COL9A3-207ENST00000467819 ZBED1O96006 694 aa22.06■■□□□ 1.12
COL9A3-207ENST00000467819 CYBBP04839 570 aa22.06■■□□□ 1.12
COL9A3-207ENST00000467819 C1QTNF9P0C862 333 aa22.06■■□□□ 1.12
COL9A3-207ENST00000467819 IL12RB1P42701 662 aa22.06■■□□□ 1.12
COL9A3-207ENST00000467819 PDE4CQ08493 712 aa22.06■■□□□ 1.12
COL9A3-207ENST00000467819 CUL2Q13617 745 aa22.06■■□□□ 1.12
COL9A3-207ENST00000467819 FUT11Q495W5 492 aa22.06■■□□□ 1.12
COL9A3-207ENST00000467819 HDDC3Q8N4P3 179 aa22.06■■□□□ 1.12
COL9A3-207ENST00000467819 OR2I1PQ8NGU4 316 aa22.06■■□□□ 1.12
COL9A3-207ENST00000467819 UCMAQ8WVF2 138 aa22.06■■□□□ 1.12
COL9A3-207ENST00000467819 TSPAN16Q9UKR8 245 aa22.06■■□□□ 1.12
COL9A3-207ENST00000467819 SLC16A3O15427 465 aaKnown RBP22.05■■□□□ 1.12
COL9A3-207ENST00000467819 PROS1P07225 676 aa22.05■■□□□ 1.12
COL9A3-207ENST00000467819 CD19P15391 556 aa22.05■■□□□ 1.12
COL9A3-207ENST00000467819 BCAT1P54687 386 aa22.05■■□□□ 1.12
COL9A3-207ENST00000467819 SGO2Q562F6 1265 aa22.05■■□□□ 1.12
COL9A3-207ENST00000467819 ZNF658Q5TYW1 1059 aaPredicted RBP22.05■■□□□ 1.12
COL9A3-207ENST00000467819 UNQ6494/PRO21346Q6UXR6 183 aa22.05■■□□□ 1.12
COL9A3-207ENST00000467819 ANKS1BQ7Z6G8 1248 aa22.05■■□□□ 1.12
COL9A3-207ENST00000467819 FMR1NBQ8N0W7 255 aaPredicted RBP22.05■■□□□ 1.12
COL9A3-207ENST00000467819 MINDY1Q8N5J2 469 aa22.05■■□□□ 1.12
COL9A3-207ENST00000467819 DDI1Q8WTU0 396 aa22.05■■□□□ 1.12
COL9A3-207ENST00000467819 ERCC4Q92889 916 aaPredicted RBP22.05■■□□□ 1.12
COL9A3-207ENST00000467819 FAM124BQ9H5Z6 455 aaPredicted RBP22.05■■□□□ 1.12
COL9A3-207ENST00000467819 PRDM16Q9HAZ2 1276 aa22.05■■□□□ 1.12
COL9A3-207ENST00000467819 LRRC4Q9HBW1 653 aa22.05■■□□□ 1.12
COL9A3-207ENST00000467819 THAP10Q9P2Z0 257 aaPredicted RBP22.05■■□□□ 1.12
COL9A3-207ENST00000467819 HESX1Q9UBX0 185 aa22.05■■□□□ 1.12
COL9A3-207ENST00000467819 CLEC4EQ9ULY5 219 aa22.05■■□□□ 1.12
COL9A3-207ENST00000467819 WASF3Q9UPY6 502 aa22.05■■□□□ 1.12
COL9A3-207ENST00000467819 XPO1O14980 1071 aaKnown RBP22.04■■□□□ 1.12
COL9A3-207ENST00000467819 OPHN1O60890 802 aa22.04■■□□□ 1.12
COL9A3-207ENST00000467819 PMS1P54277 932 aaKnown RBP22.04■■□□□ 1.12
COL9A3-207ENST00000467819 ADIGQ0VDE8 80 aa22.04■■□□□ 1.12
COL9A3-207ENST00000467819 BST2Q10589 180 aaKnown RBP22.04■■□□□ 1.12
COL9A3-207ENST00000467819 LRMPQ12912 555 aa22.04■■□□□ 1.12
COL9A3-207ENST00000467819 SEMA3BQ13214 749 aa22.04■■□□□ 1.12
COL9A3-207ENST00000467819 ANKRD40Q6AI12 368 aa22.04■■□□□ 1.12
COL9A3-207ENST00000467819 PM20D1Q6GTS8 502 aa22.04■■□□□ 1.12
COL9A3-207ENST00000467819 BHLHA9Q7RTU4 235 aa22.04■■□□□ 1.12
COL9A3-207ENST00000467819 FMNL3Q8IVF7 1028 aa22.04■■□□□ 1.12
COL9A3-207ENST00000467819 CPXM2Q8N436 756 aa22.04■■□□□ 1.12
COL9A3-207ENST00000467819 PLD4Q96BZ4 506 aa22.04■■□□□ 1.12
COL9A3-207ENST00000467819 ZNF419Q96HQ0 510 aaPredicted RBP22.04■■□□□ 1.12
COL9A3-207ENST00000467819 PIWIL1Q96J94 861 aaKnown RBP22.04■■□□□ 1.12
COL9A3-207ENST00000467819 SCNM1Q9BWG6 230 aa22.04■■□□□ 1.12
COL9A3-207ENST00000467819 ADAM33Q9BZ11 813 aa22.04■■□□□ 1.12
COL9A3-207ENST00000467819 CIPCQ9C0C6 399 aa22.04■■□□□ 1.12
COL9A3-207ENST00000467819 COQ4Q9Y3A0 265 aa22.04■■□□□ 1.12
COL9A3-207ENST00000467819 SPAARA0A1B0GVQ0 90 aa22.03■■□□□ 1.12
COL9A3-207ENST00000467819 TRIM49BA6NDI0 452 aa22.03■■□□□ 1.12
COL9A3-207ENST00000467819 ARHGAP33O14559 1287 aa22.03■■□□□ 1.12
COL9A3-207ENST00000467819 NPC1O15118 1278 aa22.03■■□□□ 1.12
COL9A3-207ENST00000467819 MAOBP27338 520 aa22.03■■□□□ 1.12
COL9A3-207ENST00000467819 CD6P30203 668 aa22.03■■□□□ 1.12
COL9A3-207ENST00000467819 YWHAEP62258 255 aaKnown RBP22.03■■□□□ 1.12
COL9A3-207ENST00000467819 FKBP3Q00688 224 aaKnown RBP22.03■■□□□ 1.12
COL9A3-207ENST00000467819 ZNF234Q14588 700 aa22.03■■□□□ 1.12
COL9A3-207ENST00000467819 PLEKHG6Q3KR16 790 aa22.03■■□□□ 1.12
COL9A3-207ENST00000467819 SYCP2LQ5T4T6 812 aa22.03■■□□□ 1.12
COL9A3-207ENST00000467819 PIP4P1Q86T03 277 aa22.03■■□□□ 1.12
COL9A3-207ENST00000467819 CACUL1Q86Y37 369 aa22.03■■□□□ 1.12
COL9A3-207ENST00000467819 ZC3H3Q8IXZ2 948 aaKnown RBP22.03■■□□□ 1.12
COL9A3-207ENST00000467819 UBA3Q8TBC4 463 aa22.03■■□□□ 1.12
COL9A3-207ENST00000467819 SORCS1Q8WY21 1168 aa22.03■■□□□ 1.12
COL9A3-207ENST00000467819 EDEM1Q92611 657 aa22.03■■□□□ 1.12
COL9A3-207ENST00000467819 FOXJ1Q92949 421 aa22.03■■□□□ 1.12
COL9A3-207ENST00000467819 IPO9Q96P70 1041 aaKnown RBP22.03■■□□□ 1.12
COL9A3-207ENST00000467819 MKRN2Q9H000 416 aaKnown RBP22.03■■□□□ 1.12
COL9A3-207ENST00000467819 OLA1Q9NTK5 396 aaKnown RBP22.03■■□□□ 1.12
COL9A3-207ENST00000467819 ELOVL2Q9NXB9 296 aa22.03■■□□□ 1.12
COL9A3-207ENST00000467819 GOLGA6L4A6NEF3 574 aa22.02■■□□□ 1.12
COL9A3-207ENST00000467819 SYNCRIPO60506 623 aaKnown RBP22.02■■□□□ 1.12
COL9A3-207ENST00000467819 TSPAN3O60637 253 aa22.02■■□□□ 1.12
COL9A3-207ENST00000467819 SYPP08247 313 aa22.02■■□□□ 1.12
COL9A3-207ENST00000467819 SIM1P81133 766 aaPredicted RBP22.02■■□□□ 1.12
COL9A3-207ENST00000467819 NUMA1Q14980 2115 aa22.02■■□□□ 1.12
COL9A3-207ENST00000467819 TRIP4Q15650 581 aaPredicted RBP22.02■■□□□ 1.12
COL9A3-207ENST00000467819 COBLL1Q53SF7 1204 aa22.02■■□□□ 1.12
COL9A3-207ENST00000467819 FAM217AQ8IXS0 508 aa22.02■■□□□ 1.12
COL9A3-207ENST00000467819 SIX6OS1Q8N1H7 587 aa22.02■■□□□ 1.12
COL9A3-207ENST00000467819 RNF139Q8WU17 664 aa22.02■■□□□ 1.12
COL9A3-207ENST00000467819 TOE1Q96GM8 510 aaKnown RBP22.02■■□□□ 1.12
COL9A3-207ENST00000467819 GSDMAQ96QA5 445 aa22.02■■□□□ 1.12
COL9A3-207ENST00000467819 ARMCX3Q9UH62 379 aaPredicted RBP22.02■■□□□ 1.12
COL9A3-207ENST00000467819 SFMBT1Q9UHJ3 866 aa22.02■■□□□ 1.12
COL9A3-207ENST00000467819 MUC22E2RYF6 1773 aaPredicted RBP22.02■■□□□ 1.11
COL9A3-207ENST00000467819 MEI4A8MW99 385 aa22.01■■□□□ 1.11
COL9A3-207ENST00000467819 UPK3BL1B0FP48 263 aa22.01■■□□□ 1.11
COL9A3-207ENST00000467819 UPK3BL2E5RIL1 263 aa22.01■■□□□ 1.11
COL9A3-207ENST00000467819 SMC2O95347 1197 aa22.01■■□□□ 1.11
COL9A3-207ENST00000467819 PRKCHP24723 683 aa22.01■■□□□ 1.11
COL9A3-207ENST00000467819 HARS2P49590 506 aaKnown RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms