RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 NLRP4Q96MN2 994 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 HDAC8Q9BY41 377 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 MRPL4Q9BYD3 311 aaKnown RBP5.97□□□□□ -1.45
PTCD3-207ENST00000467273 HCFC1R1Q9NWW0 138 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 BARHL2Q9NY43 387 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 RCAN3Q9UKA8 241 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 MAFFQ9ULX9 164 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 ZNF281Q9Y2X9 895 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 BACE2Q9Y5Z0 518 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 COMMD10Q9Y6G5 202 aa5.97□□□□□ -1.45
PTCD3-207ENST00000467273 ESYT2A0FGR8 921 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 WDR27A2RRH5 827 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 SMCO2A6NFE2 343 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 CCDC69A6NI79 296 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 NUDT19A8MXV4 375 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 F8W810 466 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 TMEM189-UBE2V1I3L0A0 370 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 DKC1O60832 514 aaKnown RBP eCLIP5.96□□□□□ -1.46
PTCD3-207ENST00000467273 GAS7O60861 476 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 LRG1P02750 347 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 SNRPB2P08579 225 aaKnown RBP5.96□□□□□ -1.46
PTCD3-207ENST00000467273 MYCLP1P12525 358 aaPredicted RBP5.96□□□□□ -1.46
PTCD3-207ENST00000467273 CEBPBP17676 345 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 KPNA1P52294 538 aaPredicted RBP5.96□□□□□ -1.46
PTCD3-207ENST00000467273 EPHA5P54756 1037 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 SLURP1P55000 103 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 ANTXR2P58335 489 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 ERVFRD-1P60508 538 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 POU5F1BQ06416 359 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 LMAN2Q12907 356 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 TUSC3Q13454 348 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 PTPAQ15257 358 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 CCDC6Q16204 474 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 NTRK3Q16288 839 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 SLC5A9Q2M3M2 681 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 C20orf194Q5TEA3 1177 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 FAM171A1Q5VUB5 890 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 WWC2Q6AWC2 1192 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 FERMT3Q86UX7 667 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 MB21D2Q8IYB1 491 aaPredicted RBP5.96□□□□□ -1.46
PTCD3-207ENST00000467273 ELMOD1Q8N336 334 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 SDR16C5Q8N3Y7 309 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 FANCBQ8NB91 859 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 GSTCDQ8NEC7 633 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 ZNF461Q8TAF7 563 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 TCP11Q8WWU5 503 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 TRIM6Q9C030 488 aaPredicted RBP5.96□□□□□ -1.46
PTCD3-207ENST00000467273 CSRNP2Q9H175 543 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 RBM28Q9NW13 759 aaKnown RBP5.96□□□□□ -1.46
PTCD3-207ENST00000467273 MTRRQ9UBK8 725 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 CFAP46Q8IYW2 2715 aa5.96□□□□□ -1.46
PTCD3-207ENST00000467273 EML5Q05BV3 1969 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 A0A087X0B3 334 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 SPECC1L-ADORA2AF8WAN1 911 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 CDX4O14627 284 aaPredicted RBP5.95□□□□□ -1.46
PTCD3-207ENST00000467273 FFAR3O14843 346 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 TRAPPC3O43617 180 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 STBD1O95210 358 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 TOP3BO95985 862 aaKnown RBP5.95□□□□□ -1.46
PTCD3-207ENST00000467273 SCG5P05408 212 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 GSNP06396 782 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 CD3EP07766 207 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 TNFRSF1AP19438 455 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 CALRP27797 417 aaKnown RBP5.95□□□□□ -1.46
PTCD3-207ENST00000467273 ELF1P32519 619 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 MCM5P33992 734 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 OR1D2P34982 312 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 ARL4AP40617 200 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 DPP6P42658 865 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 LIMS1P48059 325 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 POU4F1Q01851 419 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 CREB5Q02930 508 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 KRTAP1-1Q07627 177 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 LAMTOR4Q0VGL1 99 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 SCRN1Q12765 414 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 MAP4K2Q12851 820 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 HDAC1Q13547 482 aaPredicted RBP5.95□□□□□ -1.46
PTCD3-207ENST00000467273 MXD4Q14582 209 aaPredicted RBP5.95□□□□□ -1.46
PTCD3-207ENST00000467273 KIR3DS1Q14943 382 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 UGCGQ16739 394 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 COL28A1Q2UY09 1125 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 ARHGAP29Q52LW3 1261 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 PRR16Q569H4 304 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 CYP4A22Q5TCH4 519 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 IQCEQ6IPM2 695 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 DENND5AQ6IQ26 1287 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 SLC8B1Q6J4K2 584 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 Q6ZS52 159 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 PDZD4Q76G19 769 aaPredicted RBP5.95□□□□□ -1.46
PTCD3-207ENST00000467273 HAUS6Q7Z4H7 955 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 C11orf96Q7Z7L8 435 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 SGMS1Q86VZ5 419 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 CEP57Q86XR8 500 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 YAF2Q8IY57 180 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 TCEAL8Q8IYN2 117 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 DAGLBQ8NCG7 672 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 LSM14AQ8ND56 463 aaKnown RBP5.95□□□□□ -1.46
PTCD3-207ENST00000467273 ENOX1Q8TC92 643 aaKnown RBP5.95□□□□□ -1.46
PTCD3-207ENST00000467273 CCDC12Q8WUD4 166 aaPredicted RBP5.95□□□□□ -1.46
PTCD3-207ENST00000467273 RUFY2Q8WXA3 655 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms