RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 SPSB3Q6PJ21 355 aa4.46□□□□□ -1.7
XRN1-206ENST00000467077 TFAP2DQ7Z6R9 452 aa4.46□□□□□ -1.7
XRN1-206ENST00000467077 ZBTB45Q96K62 511 aaPredicted RBP4.46□□□□□ -1.7
XRN1-206ENST00000467077 INPP4AQ96PE3 977 aaPredicted RBP4.46□□□□□ -1.7
XRN1-206ENST00000467077 LUC7L2Q9Y383 392 aaKnown RBP4.46□□□□□ -1.7
XRN1-206ENST00000467077 CLASP1Q7Z460 1538 aa4.46□□□□□ -1.7
XRN1-206ENST00000467077 KIF13AQ9H1H9 1805 aa4.45□□□□□ -1.7
XRN1-206ENST00000467077 IL33O95760 270 aa4.45□□□□□ -1.7
XRN1-206ENST00000467077 TAF6P49848 677 aa4.45□□□□□ -1.7
XRN1-206ENST00000467077 PGDP52209 483 aa4.45□□□□□ -1.7
XRN1-206ENST00000467077 ANAPC15P60006 121 aa4.45□□□□□ -1.7
XRN1-206ENST00000467077 KRTAP24-1Q3LI83 254 aa4.45□□□□□ -1.7
XRN1-206ENST00000467077 HSPBAP1Q96EW2 488 aa4.45□□□□□ -1.7
XRN1-206ENST00000467077 PPP1R9BQ96SB3 815 aa4.45□□□□□ -1.7
XRN1-206ENST00000467077 ARMT1Q9H993 441 aa4.45□□□□□ -1.7
XRN1-206ENST00000467077 AGO4Q9HCK5 861 aaKnown RBP4.45□□□□□ -1.7
XRN1-206ENST00000467077 TYW1Q9NV66 732 aaKnown RBP4.45□□□□□ -1.7
XRN1-206ENST00000467077 NCKIPSDQ9NZQ3 722 aa4.45□□□□□ -1.7
XRN1-206ENST00000467077 IPO11Q9UI26 975 aaKnown RBP4.45□□□□□ -1.7
XRN1-206ENST00000467077 HEMK1Q9Y5R4 338 aaPredicted RBP4.45□□□□□ -1.7
XRN1-206ENST00000467077 KIR2DS5A0A0G2JLQ3 304 aa4.44□□□□□ -1.7
XRN1-206ENST00000467077 KIR2DS3K7RE56 304 aa4.44□□□□□ -1.7
XRN1-206ENST00000467077 PHGDHO43175 533 aaKnown RBP4.44□□□□□ -1.7
XRN1-206ENST00000467077 PRAMEF2O60811 474 aa4.44□□□□□ -1.7
XRN1-206ENST00000467077 POU2F2P09086 479 aa4.44□□□□□ -1.7
XRN1-206ENST00000467077 ROR2Q01974 943 aaKnown RBP4.44□□□□□ -1.7
XRN1-206ENST00000467077 GAD2Q05329 585 aa4.44□□□□□ -1.7
XRN1-206ENST00000467077 RAB32Q13637 225 aa4.44□□□□□ -1.7
XRN1-206ENST00000467077 ZNF718Q3SXZ3 478 aa4.44□□□□□ -1.7
XRN1-206ENST00000467077 C6orf10Q5SRN2 563 aa4.44□□□□□ -1.7
XRN1-206ENST00000467077 CEP85LQ5SZL2 805 aa4.44□□□□□ -1.7
XRN1-206ENST00000467077 PRSS57Q6UWY2 283 aa4.44□□□□□ -1.7
XRN1-206ENST00000467077 OR6B3Q8NGW1 331 aa4.44□□□□□ -1.7
XRN1-206ENST00000467077 CENPIQ92674 756 aaPredicted RBP4.44□□□□□ -1.7
XRN1-206ENST00000467077 KAT2BQ92831 832 aa4.44□□□□□ -1.7
XRN1-206ENST00000467077 MRGPRX1Q96LB2 322 aa4.44□□□□□ -1.7
XRN1-206ENST00000467077 TASP1Q9H6P5 420 aa4.44□□□□□ -1.7
XRN1-206ENST00000467077 TCF7L1Q9HCS4 588 aa4.44□□□□□ -1.7
XRN1-206ENST00000467077 AASDHPPTQ9NRN7 309 aa4.44□□□□□ -1.7
XRN1-206ENST00000467077 STEAP1Q9UHE8 339 aa4.44□□□□□ -1.7
XRN1-206ENST00000467077 STXBP5LQ9Y2K9 1186 aa4.44□□□□□ -1.7
XRN1-206ENST00000467077 PBRM1Q86U86 1689 aa4.44□□□□□ -1.7
XRN1-206ENST00000467077 CCDC88BA6NC98 1476 aa4.43□□□□□ -1.7
XRN1-206ENST00000467077 SNAPC4Q5SXM2 1469 aa4.43□□□□□ -1.7
XRN1-206ENST00000467077 ANTXRLA6NF34 631 aa4.43□□□□□ -1.7
XRN1-206ENST00000467077 SRRM3A6NNA2 597 aaPredicted RBP4.43□□□□□ -1.7
XRN1-206ENST00000467077 CHRNB1P11230 501 aa4.43□□□□□ -1.7
XRN1-206ENST00000467077 CPA1P15085 419 aa4.43□□□□□ -1.7
XRN1-206ENST00000467077 PCYT1AP49585 367 aa4.43□□□□□ -1.7
XRN1-206ENST00000467077 GATMP50440 423 aa4.43□□□□□ -1.7
XRN1-206ENST00000467077 POU3F1Q03052 451 aaPredicted RBP4.43□□□□□ -1.7
XRN1-206ENST00000467077 CRYZQ08257 329 aaKnown RBP4.43□□□□□ -1.7
XRN1-206ENST00000467077 CTBP1Q13363 440 aa4.43□□□□□ -1.7
XRN1-206ENST00000467077 CATIPQ7Z7H3 387 aa4.43□□□□□ -1.7
XRN1-206ENST00000467077 STAG1Q8WVM7 1258 aa4.43□□□□□ -1.7
XRN1-206ENST00000467077 KBTBD7Q8WVZ9 684 aa4.43□□□□□ -1.7
XRN1-206ENST00000467077 HOOK2Q96ED9 719 aa4.43□□□□□ -1.7
XRN1-206ENST00000467077 GTPBP4Q9BZE4 634 aaKnown RBP4.43□□□□□ -1.7
XRN1-206ENST00000467077 DDX56Q9NY93 547 aaKnown RBP4.43□□□□□ -1.7
XRN1-206ENST00000467077 DOCK7Q96N67 2140 aa4.43□□□□□ -1.7
XRN1-206ENST00000467077 BTN3A1O00481 513 aa4.42□□□□□ -1.7
XRN1-206ENST00000467077 ALDH1L1O75891 902 aa4.42□□□□□ -1.7
XRN1-206ENST00000467077 PDGFRBP09619 1106 aa4.42□□□□□ -1.7
XRN1-206ENST00000467077 HGFP14210 728 aa4.42□□□□□ -1.7
XRN1-206ENST00000467077 VCAM1P19320 739 aa4.42□□□□□ -1.7
XRN1-206ENST00000467077 AKAP5P24588 427 aa4.42□□□□□ -1.7
XRN1-206ENST00000467077 GALNSP34059 522 aa4.42□□□□□ -1.7
XRN1-206ENST00000467077 IGBP1P78318 339 aa4.42□□□□□ -1.7
XRN1-206ENST00000467077 SLC13A2Q13183 592 aa4.42□□□□□ -1.7
XRN1-206ENST00000467077 P3H2Q8IVL5 708 aa4.42□□□□□ -1.7
XRN1-206ENST00000467077 NUP88Q99567 741 aaPredicted RBP4.42□□□□□ -1.7
XRN1-206ENST00000467077 ELOVL1Q9BW60 279 aa4.42□□□□□ -1.7
XRN1-206ENST00000467077 TRIM54Q9BYV2 358 aa4.42□□□□□ -1.7
XRN1-206ENST00000467077 DCLK3Q9C098 648 aa4.42□□□□□ -1.7
XRN1-206ENST00000467077 IP6K2Q9UHH9 426 aa4.42□□□□□ -1.7
XRN1-206ENST00000467077 PAXBP1Q9Y5B6 917 aa4.42□□□□□ -1.7
XRN1-206ENST00000467077 WDR97A6NE52 1622 aa4.42□□□□□ -1.7
XRN1-206ENST00000467077 POLA1P09884 1462 aaPredicted RBP4.42□□□□□ -1.7
XRN1-206ENST00000467077 GAPVD1Q14C86 1478 aa4.42□□□□□ -1.7
XRN1-206ENST00000467077 RAD54L2Q9Y4B4 1467 aa4.42□□□□□ -1.7
XRN1-206ENST00000467077 TDRD9Q8NDG6 1382 aaKnown RBP4.41□□□□□ -1.7
XRN1-206ENST00000467077 CKAP5Q14008 2032 aa4.41□□□□□ -1.7
XRN1-206ENST00000467077 SOGA1O94964 1423 aa4.41□□□□□ -1.7
XRN1-206ENST00000467077 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.41□□□□□ -1.7
XRN1-206ENST00000467077 A6NNC1 897 aa4.41□□□□□ -1.7
XRN1-206ENST00000467077 AP1G1O43747 822 aa4.41□□□□□ -1.7
XRN1-206ENST00000467077 TBC1D4O60343 1298 aa4.41□□□□□ -1.7
XRN1-206ENST00000467077 PF4V1P10720 104 aa4.41□□□□□ -1.7
XRN1-206ENST00000467077 VPS41P49754 854 aa4.41□□□□□ -1.7
XRN1-206ENST00000467077 EIF4A1P60842 406 aaKnown RBP4.41□□□□□ -1.7
XRN1-206ENST00000467077 POU5F1BQ06416 359 aa4.41□□□□□ -1.7
XRN1-206ENST00000467077 COASYQ13057 564 aa4.41□□□□□ -1.7
XRN1-206ENST00000467077 CNGA3Q16281 694 aa4.41□□□□□ -1.7
XRN1-206ENST00000467077 PIK3CD-AS1Q5SR53 167 aa4.41□□□□□ -1.7
XRN1-206ENST00000467077 TMEM174Q8WUU8 243 aa4.41□□□□□ -1.7
XRN1-206ENST00000467077 MVB12AQ96EY5 273 aa4.41□□□□□ -1.7
XRN1-206ENST00000467077 P2RY11Q96G91 374 aa4.41□□□□□ -1.7
XRN1-206ENST00000467077 GATA5Q9BWX5 397 aaPredicted RBP4.41□□□□□ -1.7
XRN1-206ENST00000467077 RETREG1Q9H6L5 497 aa4.41□□□□□ -1.7
XRN1-206ENST00000467077 SEMA5BQ9P283 1151 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms